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Results for F54C4.2

Gene ID Gene Name Reads Transcripts Annotation
F54C4.2 spt-4 3392 F54C4.2 Transcription elongation factor SPT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZ93]

Genes with expression patterns similar to F54C4.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54C4.2 spt-4 3392 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Transcription elongation factor SPT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZ93]
2. T10F2.4 prp-19 11298 7.639 0.942 0.967 0.966 0.967 0.973 0.972 0.929 0.923 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
3. K01G5.4 ran-1 32379 7.636 0.964 0.965 0.973 0.965 0.970 0.930 0.931 0.938 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
4. F36A2.1 cids-2 4551 7.623 0.960 0.947 0.959 0.947 0.949 0.969 0.951 0.941 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
5. K12C11.2 smo-1 12784 7.609 0.975 0.958 0.958 0.958 0.965 0.910 0.954 0.931 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
6. W02B12.3 rsp-1 9235 7.603 0.961 0.958 0.974 0.958 0.970 0.930 0.947 0.905 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
7. Y111B2A.18 rsp-3 43731 7.594 0.961 0.964 0.964 0.964 0.977 0.925 0.900 0.939 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
8. C33H5.12 rsp-6 23342 7.588 0.972 0.949 0.969 0.949 0.961 0.926 0.953 0.909 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
9. T10C6.4 srx-44 8454 7.58 0.941 0.962 0.963 0.962 0.961 0.942 0.935 0.914 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
10. C08B11.5 sap-49 10553 7.58 0.940 0.941 0.945 0.941 0.974 0.940 0.953 0.946 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
11. F42A6.7 hrp-1 28201 7.579 0.970 0.955 0.963 0.955 0.953 0.917 0.949 0.917 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
12. R08C7.3 htz-1 32725 7.576 0.948 0.953 0.968 0.953 0.966 0.906 0.975 0.907 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
13. F32E10.6 cec-5 10643 7.574 0.958 0.956 0.958 0.956 0.967 0.902 0.967 0.910 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
14. C53D5.6 imb-3 28921 7.574 0.922 0.967 0.948 0.967 0.972 0.906 0.959 0.933 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
15. T23H2.1 npp-12 12425 7.573 0.956 0.950 0.977 0.950 0.940 0.918 0.954 0.928 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
16. C26D10.2 hel-1 28697 7.57 0.934 0.962 0.927 0.962 0.981 0.973 0.929 0.902 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
17. Y56A3A.17 npp-16 5391 7.566 0.961 0.937 0.972 0.937 0.951 0.914 0.968 0.926 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
18. C18D11.4 rsp-8 18308 7.563 0.942 0.962 0.961 0.962 0.965 0.961 0.930 0.880 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
19. C27B7.1 spr-2 14958 7.56 0.962 0.940 0.969 0.940 0.971 0.947 0.955 0.876 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
20. F32H2.1 snpc-4 7581 7.559 0.938 0.958 0.973 0.958 0.955 0.899 0.965 0.913 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
21. ZK742.1 xpo-1 20741 7.554 0.951 0.949 0.956 0.949 0.946 0.941 0.935 0.927 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
22. Y65B4BL.2 deps-1 18277 7.551 0.927 0.951 0.968 0.951 0.969 0.952 0.941 0.892
23. T16G1.11 eif-3.K 14014 7.549 0.939 0.959 0.916 0.959 0.967 0.955 0.948 0.906 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
24. Y53H1C.1 aat-9 5713 7.546 0.941 0.958 0.973 0.958 0.956 0.936 0.934 0.890 Amino Acid Transporter [Source:RefSeq peptide;Acc:NP_001021788]
25. C48B4.11 C48B4.11 4384 7.543 0.928 0.957 0.979 0.957 0.961 0.930 0.949 0.882
26. T12D8.3 acbp-5 6816 7.542 0.950 0.947 0.967 0.947 0.964 0.907 0.930 0.930 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
27. B0035.3 B0035.3 4118 7.541 0.944 0.945 0.958 0.945 0.947 0.962 0.968 0.872
28. F28H1.3 aars-2 13537 7.536 0.949 0.950 0.951 0.950 0.954 0.935 0.934 0.913 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
29. F37E3.1 ncbp-1 5649 7.535 0.947 0.946 0.973 0.946 0.955 0.944 0.931 0.893 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
30. K08E3.8 mdt-29 4678 7.53 0.946 0.958 0.951 0.958 0.945 0.911 0.944 0.917 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
31. C25D7.8 otub-1 7941 7.53 0.934 0.929 0.980 0.929 0.949 0.923 0.957 0.929 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
32. F46B6.3 smg-4 4959 7.529 0.929 0.929 0.971 0.929 0.968 0.976 0.929 0.898 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
33. EEED8.7 rsp-4 13043 7.528 0.952 0.946 0.969 0.946 0.962 0.897 0.929 0.927 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
34. K08F11.5 miro-1 4512 7.528 0.904 0.927 0.929 0.927 0.980 0.972 0.957 0.932 Mitochondrial Rho GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94263]
35. C09G4.3 cks-1 17852 7.524 0.950 0.930 0.965 0.930 0.968 0.972 0.930 0.879 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
36. F56D1.7 daz-1 23684 7.522 0.927 0.960 0.978 0.960 0.965 0.892 0.924 0.916 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
37. D1081.8 cdc-5L 8553 7.522 0.919 0.950 0.968 0.950 0.975 0.949 0.932 0.879 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
38. C52E4.6 cyl-1 6405 7.521 0.936 0.944 0.934 0.944 0.930 0.956 0.948 0.929 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
39. ZK328.2 eftu-2 7040 7.52 0.908 0.954 0.955 0.954 0.935 0.926 0.963 0.925 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
40. F32H2.4 thoc-3 3861 7.516 0.930 0.938 0.959 0.938 0.942 0.942 0.944 0.923 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
41. T04A8.14 emb-5 11746 7.516 0.941 0.948 0.972 0.948 0.974 0.923 0.898 0.912 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
42. Y37E3.3 rpb-10 4051 7.515 0.931 0.948 0.965 0.948 0.914 0.921 0.937 0.951 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
43. F22D6.3 nars-1 18624 7.515 0.947 0.946 0.945 0.946 0.966 0.938 0.912 0.915 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
44. C26E6.4 rpb-2 7053 7.514 0.921 0.963 0.934 0.963 0.960 0.921 0.949 0.903 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
45. T05H4.14 gad-1 7979 7.514 0.967 0.902 0.969 0.902 0.945 0.897 0.966 0.966 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
46. R53.2 dtmk-1 6821 7.514 0.947 0.955 0.950 0.955 0.948 0.872 0.945 0.942 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
47. K08E7.1 eak-7 18960 7.513 0.944 0.940 0.986 0.940 0.935 0.893 0.937 0.938 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
48. T12D8.8 hip-1 18283 7.511 0.945 0.970 0.913 0.970 0.971 0.931 0.914 0.897 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
49. C18A3.5 tiar-1 25400 7.51 0.963 0.960 0.970 0.960 0.969 0.919 0.932 0.837 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
50. Y54E5A.4 npp-4 6288 7.509 0.919 0.940 0.973 0.940 0.963 0.941 0.937 0.896 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
51. Y17G7A.1 hmg-12 29989 7.508 0.946 0.956 0.958 0.956 0.935 0.929 0.944 0.884 HMG [Source:RefSeq peptide;Acc:NP_496544]
52. R09B3.5 mag-1 7496 7.508 0.926 0.968 0.962 0.968 0.900 0.928 0.935 0.921 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
53. F56C9.6 F56C9.6 4303 7.508 0.942 0.940 0.956 0.940 0.946 0.946 0.969 0.869
54. Y51H1A.6 mcd-1 3250 7.505 0.965 0.954 0.931 0.954 0.906 0.934 0.940 0.921 Modifier of Cell Death phenotype [Source:RefSeq peptide;Acc:NP_001254412]
55. Y61A9LA.8 sut-2 11388 7.505 0.953 0.954 0.981 0.954 0.958 0.908 0.915 0.882 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
56. Y47G6A.8 crn-1 3494 7.505 0.929 0.927 0.970 0.927 0.969 0.934 0.958 0.891 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
57. W03F9.5 ttb-1 8682 7.505 0.951 0.962 0.967 0.962 0.951 0.898 0.888 0.926 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
58. B0464.7 baf-1 10161 7.504 0.937 0.955 0.923 0.955 0.929 0.925 0.951 0.929 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
59. F45F2.11 F45F2.11 6741 7.504 0.887 0.954 0.972 0.954 0.968 0.963 0.926 0.880
60. Y71D11A.2 smr-1 4976 7.504 0.953 0.930 0.954 0.930 0.962 0.965 0.885 0.925 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
61. C28H8.9 dpff-1 8684 7.503 0.943 0.919 0.960 0.919 0.964 0.942 0.927 0.929 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
62. T17E9.2 nmt-1 8017 7.503 0.910 0.951 0.914 0.951 0.973 0.949 0.930 0.925 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
63. F54C4.1 mrpl-40 2843 7.502 0.909 0.946 0.941 0.946 0.941 0.921 0.974 0.924 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497138]
64. ZK1058.4 ccdc-47 8879 7.501 0.959 0.937 0.933 0.937 0.953 0.921 0.938 0.923 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
65. K02F3.11 rnp-5 6205 7.5 0.965 0.933 0.967 0.933 0.927 0.916 0.919 0.940 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
66. F56D2.6 ddx-15 12282 7.499 0.905 0.933 0.969 0.933 0.955 0.922 0.957 0.925 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
67. C49C3.7 C49C3.7 3004 7.498 0.945 0.951 0.958 0.951 0.932 0.903 0.910 0.948
68. R12C12.2 ran-5 14517 7.492 0.941 0.922 0.968 0.922 0.933 0.936 0.962 0.908 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
69. Y23H5B.6 Y23H5B.6 5886 7.491 0.941 0.941 0.983 0.941 0.919 0.875 0.945 0.946
70. W01G7.3 rpb-11 7826 7.49 0.920 0.938 0.982 0.938 0.954 0.949 0.963 0.846 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
71. Y37E3.15 npp-13 7250 7.489 0.963 0.954 0.951 0.954 0.910 0.935 0.951 0.871 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
72. F33H1.4 F33H1.4 2447 7.489 0.916 0.922 0.959 0.922 0.916 0.918 0.969 0.967
73. T21D12.3 pqbp-1.1 5755 7.488 0.913 0.941 0.949 0.941 0.942 0.953 0.939 0.910 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
74. F08B4.5 pole-2 8234 7.487 0.928 0.931 0.967 0.931 0.966 0.962 0.919 0.883 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
75. R13F6.10 cra-1 11610 7.486 0.907 0.958 0.933 0.958 0.967 0.928 0.912 0.923 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
76. ZK686.4 snu-23 9040 7.485 0.962 0.929 0.970 0.929 0.940 0.931 0.965 0.859 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
77. F23F1.1 nfyc-1 9983 7.484 0.956 0.950 0.972 0.950 0.909 0.909 0.946 0.892 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
78. K11D12.2 pqn-51 15951 7.484 0.931 0.927 0.969 0.927 0.953 0.914 0.941 0.922 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
79. F52C9.7 mog-3 9880 7.484 0.952 0.950 0.979 0.950 0.909 0.904 0.962 0.878 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
80. C34E10.5 prmt-5 12277 7.483 0.911 0.947 0.958 0.947 0.946 0.902 0.936 0.936 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
81. T05E8.3 let-355 8169 7.479 0.896 0.964 0.969 0.964 0.973 0.923 0.926 0.864
82. C06A1.5 rpb-6 7515 7.478 0.948 0.951 0.944 0.951 0.905 0.891 0.938 0.950 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
83. C43E11.1 acin-1 7781 7.477 0.933 0.949 0.970 0.949 0.974 0.925 0.911 0.866 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
84. C18G1.5 hil-4 21692 7.476 0.946 0.920 0.970 0.920 0.983 0.907 0.952 0.878 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
85. R05D11.3 ran-4 15494 7.475 0.950 0.953 0.951 0.953 0.965 0.945 0.899 0.859 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
86. Y113G7B.23 swsn-1 13766 7.475 0.967 0.928 0.968 0.928 0.959 0.949 0.885 0.891 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
87. B0464.2 ctr-9 7610 7.474 0.881 0.957 0.969 0.957 0.925 0.925 0.950 0.910 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
88. C08B11.6 arp-6 4646 7.473 0.929 0.924 0.942 0.924 0.965 0.940 0.906 0.943 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
89. B0414.3 hil-5 10816 7.473 0.964 0.957 0.972 0.957 0.934 0.876 0.906 0.907 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
90. ZK970.3 mdt-22 1925 7.472 0.943 0.945 0.907 0.945 0.932 0.902 0.968 0.930 Mediator of RNA polymerase II transcription subunit 22 [Source:UniProtKB/Swiss-Prot;Acc:Q23679]
91. T05F1.6 hsr-9 13312 7.472 0.944 0.945 0.963 0.945 0.979 0.913 0.920 0.863
92. T21B10.4 T21B10.4 11648 7.471 0.941 0.927 0.959 0.927 0.924 0.957 0.928 0.908
93. T09A5.8 cec-3 5813 7.471 0.911 0.933 0.953 0.933 0.954 0.895 0.955 0.937 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
94. W06H3.3 ctps-1 8363 7.471 0.918 0.959 0.945 0.959 0.891 0.902 0.944 0.953 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
95. T28D9.2 rsp-5 6460 7.471 0.958 0.956 0.972 0.956 0.893 0.853 0.954 0.929 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
96. F53F4.3 tbcb-1 6442 7.468 0.937 0.956 0.967 0.956 0.874 0.898 0.942 0.938 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
97. T27F2.1 skp-1 3532 7.467 0.916 0.952 0.946 0.952 0.948 0.936 0.865 0.952 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
98. Y54H5A.3 tag-262 4269 7.465 0.924 0.902 0.957 0.902 0.967 0.959 0.951 0.903
99. F58D5.1 hrp-2 17211 7.464 0.944 0.938 0.942 0.938 0.967 0.928 0.939 0.868 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
100. Y34D9A.1 mrpl-38 5291 7.464 0.919 0.933 0.933 0.933 0.966 0.949 0.954 0.877 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA