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Results for K08F11.5

Gene ID Gene Name Reads Transcripts Annotation
K08F11.5 miro-1 4512 K08F11.5 Mitochondrial Rho GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94263]

Genes with expression patterns similar to K08F11.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. K08F11.5 miro-1 4512 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Rho GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94263]
2. T04A8.14 emb-5 11746 7.699 0.962 0.961 0.947 0.961 0.984 0.975 0.948 0.961 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
3. Y65B4BL.2 deps-1 18277 7.679 0.971 0.960 0.952 0.960 0.975 0.960 0.967 0.934
4. F22D6.3 nars-1 18624 7.675 0.924 0.965 0.957 0.965 0.978 0.975 0.964 0.947 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
5. C27B7.1 spr-2 14958 7.669 0.936 0.966 0.960 0.966 0.980 0.963 0.960 0.938 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
6. F32H2.4 thoc-3 3861 7.665 0.968 0.957 0.951 0.957 0.944 0.969 0.961 0.958 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
7. K01G5.4 ran-1 32379 7.662 0.952 0.963 0.961 0.963 0.972 0.967 0.923 0.961 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
8. F28B3.7 him-1 18274 7.661 0.978 0.960 0.955 0.960 0.949 0.980 0.961 0.918 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
9. ZK686.4 snu-23 9040 7.659 0.952 0.966 0.959 0.966 0.952 0.974 0.967 0.923 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
10. C08B11.6 arp-6 4646 7.653 0.951 0.952 0.969 0.952 0.962 0.968 0.957 0.942 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
11. D1081.8 cdc-5L 8553 7.649 0.963 0.962 0.941 0.962 0.984 0.953 0.965 0.919 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
12. ZK328.2 eftu-2 7040 7.646 0.950 0.961 0.968 0.961 0.938 0.963 0.966 0.939 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
13. F36A2.1 cids-2 4551 7.645 0.928 0.962 0.964 0.962 0.965 0.982 0.941 0.941 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
14. W02B12.3 rsp-1 9235 7.645 0.947 0.952 0.965 0.952 0.972 0.953 0.967 0.937 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
15. Y54E2A.3 tac-1 6308 7.639 0.958 0.947 0.937 0.947 0.957 0.994 0.958 0.941 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
16. T16G1.11 eif-3.K 14014 7.638 0.928 0.958 0.914 0.958 0.976 0.982 0.964 0.958 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
17. R12C12.2 ran-5 14517 7.637 0.960 0.955 0.964 0.955 0.944 0.969 0.949 0.941 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
18. Y38A8.3 ulp-2 7403 7.637 0.976 0.961 0.952 0.961 0.967 0.949 0.932 0.939 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
19. T10C6.4 srx-44 8454 7.634 0.945 0.948 0.956 0.948 0.967 0.971 0.960 0.939 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
20. T23H2.1 npp-12 12425 7.634 0.961 0.955 0.948 0.955 0.952 0.953 0.949 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
21. C02B10.5 C02B10.5 9171 7.633 0.954 0.949 0.935 0.949 0.964 0.965 0.966 0.951
22. T10F2.4 prp-19 11298 7.627 0.942 0.951 0.946 0.951 0.978 0.988 0.940 0.931 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
23. Y110A7A.8 prp-31 4436 7.626 0.972 0.983 0.946 0.983 0.963 0.974 0.915 0.890 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
24. Y34D9A.1 mrpl-38 5291 7.625 0.932 0.956 0.918 0.956 0.973 0.981 0.978 0.931 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
25. Y46G5A.4 snrp-200 13827 7.622 0.962 0.960 0.925 0.960 0.951 0.959 0.960 0.945 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
26. T27F2.1 skp-1 3532 7.622 0.925 0.971 0.942 0.971 0.963 0.968 0.926 0.956 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
27. Y54E5A.4 npp-4 6288 7.621 0.944 0.958 0.942 0.958 0.965 0.978 0.926 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
28. F56D2.6 ddx-15 12282 7.618 0.941 0.967 0.921 0.967 0.963 0.955 0.963 0.941 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
29. Y17G7A.1 hmg-12 29989 7.618 0.960 0.972 0.952 0.972 0.949 0.941 0.956 0.916 HMG [Source:RefSeq peptide;Acc:NP_496544]
30. F37E3.1 ncbp-1 5649 7.617 0.959 0.955 0.916 0.955 0.958 0.975 0.976 0.923 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
31. C36B1.8 gls-1 8617 7.617 0.967 0.936 0.942 0.936 0.973 0.964 0.962 0.937 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
32. T20G5.11 rde-4 3966 7.617 0.972 0.949 0.944 0.949 0.978 0.939 0.959 0.927 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
33. C25D7.8 otub-1 7941 7.617 0.944 0.952 0.954 0.952 0.955 0.964 0.943 0.953 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
34. C52E4.6 cyl-1 6405 7.616 0.939 0.957 0.941 0.957 0.939 0.980 0.938 0.965 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
35. Y48G8AL.6 smg-2 12561 7.615 0.948 0.972 0.953 0.972 0.941 0.965 0.916 0.948 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
36. Y113G7B.23 swsn-1 13766 7.615 0.944 0.957 0.933 0.957 0.974 0.981 0.933 0.936 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
37. Y61A9LA.8 sut-2 11388 7.615 0.952 0.953 0.955 0.953 0.959 0.951 0.954 0.938 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
38. F18E2.3 scc-3 13464 7.613 0.982 0.958 0.960 0.958 0.928 0.923 0.954 0.950 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
39. K11D12.2 pqn-51 15951 7.611 0.954 0.963 0.935 0.963 0.951 0.969 0.913 0.963 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
40. E01A2.4 let-504 9788 7.611 0.960 0.964 0.965 0.964 0.950 0.952 0.946 0.910
41. C34E10.5 prmt-5 12277 7.61 0.936 0.958 0.939 0.958 0.952 0.958 0.953 0.956 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
42. F46B6.3 smg-4 4959 7.61 0.947 0.957 0.940 0.957 0.957 0.977 0.946 0.929 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
43. F28C6.6 suf-1 3642 7.605 0.961 0.966 0.925 0.966 0.939 0.957 0.961 0.930 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
44. F35G12.8 smc-4 6202 7.603 0.975 0.968 0.968 0.968 0.965 0.943 0.927 0.889 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
45. C43E11.1 acin-1 7781 7.603 0.934 0.960 0.947 0.960 0.974 0.959 0.966 0.903 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
46. C18G1.5 hil-4 21692 7.602 0.941 0.951 0.972 0.951 0.981 0.935 0.977 0.894 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
47. B0035.3 B0035.3 4118 7.6 0.964 0.945 0.925 0.945 0.954 0.987 0.963 0.917
48. D2089.1 rsp-7 11057 7.599 0.960 0.966 0.961 0.966 0.938 0.971 0.919 0.918 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
49. W01G7.3 rpb-11 7826 7.596 0.934 0.952 0.962 0.952 0.965 0.966 0.942 0.923 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
50. C48B4.11 C48B4.11 4384 7.596 0.933 0.969 0.961 0.969 0.968 0.936 0.936 0.924
51. F10G8.3 rae-1 7542 7.595 0.931 0.961 0.954 0.961 0.966 0.962 0.932 0.928 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
52. H19N07.1 erfa-3 19869 7.594 0.905 0.961 0.928 0.961 0.981 0.982 0.942 0.934 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
53. C18A3.5 tiar-1 25400 7.592 0.945 0.963 0.955 0.963 0.974 0.961 0.936 0.895 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
54. T12D8.3 acbp-5 6816 7.592 0.913 0.962 0.945 0.962 0.978 0.953 0.942 0.937 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
55. K12C11.2 smo-1 12784 7.591 0.943 0.938 0.957 0.938 0.969 0.946 0.951 0.949 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
56. Y37A1B.1 lst-3 10739 7.59 0.942 0.955 0.941 0.955 0.953 0.946 0.961 0.937 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
57. C53D5.6 imb-3 28921 7.589 0.923 0.969 0.928 0.969 0.966 0.943 0.963 0.928 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
58. T21B10.4 T21B10.4 11648 7.587 0.969 0.936 0.961 0.936 0.930 0.986 0.965 0.904
59. C50C3.6 prp-8 19582 7.587 0.935 0.953 0.936 0.953 0.975 0.974 0.933 0.928 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
60. F32A5.1 ada-2 8343 7.586 0.965 0.961 0.951 0.961 0.953 0.949 0.940 0.906 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
61. Y111B2A.18 rsp-3 43731 7.585 0.932 0.939 0.943 0.939 0.974 0.958 0.934 0.966 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
62. T21D12.3 pqbp-1.1 5755 7.583 0.916 0.931 0.962 0.931 0.958 0.977 0.946 0.962 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
63. C36B1.3 rpb-3 4442 7.583 0.909 0.966 0.966 0.966 0.953 0.960 0.915 0.948 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
64. F56C9.6 F56C9.6 4303 7.583 0.940 0.965 0.941 0.965 0.953 0.946 0.958 0.915
65. W02F12.6 sna-1 7338 7.583 0.965 0.949 0.943 0.949 0.943 0.949 0.948 0.937 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
66. F32E10.6 cec-5 10643 7.582 0.943 0.932 0.924 0.932 0.972 0.951 0.971 0.957 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
67. F08B4.5 pole-2 8234 7.581 0.979 0.949 0.948 0.949 0.962 0.958 0.922 0.914 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
68. C08B11.5 sap-49 10553 7.58 0.913 0.968 0.902 0.968 0.970 0.965 0.958 0.936 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
69. C05C8.6 hpo-9 8263 7.579 0.972 0.947 0.948 0.947 0.931 0.952 0.953 0.929
70. F32E10.4 ima-3 35579 7.579 0.918 0.956 0.952 0.956 0.971 0.966 0.923 0.937 Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
71. T05E8.3 let-355 8169 7.579 0.928 0.960 0.949 0.960 0.979 0.950 0.954 0.899
72. Y47G6A.8 crn-1 3494 7.579 0.932 0.948 0.915 0.948 0.976 0.958 0.979 0.923 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
73. F42A6.7 hrp-1 28201 7.578 0.930 0.950 0.937 0.950 0.962 0.965 0.949 0.935 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
74. B0041.7 xnp-1 9187 7.578 0.940 0.955 0.925 0.955 0.976 0.985 0.952 0.890 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
75. C28H8.9 dpff-1 8684 7.575 0.969 0.932 0.902 0.932 0.971 0.982 0.936 0.951 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
76. R144.4 wip-1 14168 7.574 0.939 0.949 0.952 0.949 0.957 0.951 0.945 0.932 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
77. K06H7.6 apc-2 2979 7.574 0.949 0.952 0.949 0.952 0.968 0.944 0.923 0.937 Anaphase-promoting complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P34514]
78. D2030.6 prg-1 26751 7.572 0.931 0.947 0.931 0.947 0.966 0.945 0.970 0.935 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
79. T05F1.6 hsr-9 13312 7.572 0.964 0.962 0.944 0.962 0.980 0.935 0.939 0.886
80. Y40B1B.5 eif-3.J 15061 7.571 0.931 0.957 0.938 0.957 0.973 0.967 0.925 0.923 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
81. Y54E10A.9 vbh-1 28746 7.571 0.915 0.960 0.920 0.960 0.976 0.963 0.957 0.920 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
82. C15H11.4 dhs-22 21674 7.571 0.964 0.943 0.939 0.943 0.973 0.956 0.913 0.940 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
83. T19B4.2 npp-7 13073 7.57 0.946 0.964 0.928 0.964 0.963 0.961 0.918 0.926 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
84. C18D11.4 rsp-8 18308 7.57 0.906 0.957 0.909 0.957 0.969 0.979 0.953 0.940 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
85. K08F11.3 cif-1 10218 7.568 0.915 0.946 0.911 0.946 0.973 0.977 0.963 0.937 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
86. T05H10.2 apn-1 5628 7.568 0.948 0.962 0.955 0.962 0.937 0.967 0.958 0.879 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
87. ZK973.2 cec-10 7108 7.567 0.929 0.958 0.962 0.958 0.924 0.979 0.928 0.929 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
88. F56D1.7 daz-1 23684 7.566 0.950 0.952 0.942 0.952 0.966 0.929 0.942 0.933 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
89. Y39G10AR.7 ekl-7 7072 7.565 0.947 0.964 0.933 0.964 0.962 0.932 0.920 0.943
90. F41E6.4 smk-1 22394 7.564 0.967 0.966 0.957 0.966 0.932 0.942 0.916 0.918 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
91. K03H1.2 mog-1 4057 7.564 0.963 0.947 0.952 0.947 0.935 0.971 0.942 0.907 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
92. K08E3.8 mdt-29 4678 7.564 0.937 0.972 0.898 0.972 0.944 0.961 0.963 0.917 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
93. T05C3.5 dnj-19 20420 7.563 0.941 0.943 0.937 0.943 0.970 0.977 0.949 0.903 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
94. T12E12.4 drp-1 7694 7.562 0.951 0.952 0.942 0.952 0.926 0.962 0.914 0.963 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
95. T24F1.2 samp-1 8422 7.562 0.956 0.921 0.956 0.921 0.973 0.966 0.954 0.915 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
96. C26D10.2 hel-1 28697 7.562 0.885 0.952 0.912 0.952 0.986 0.973 0.961 0.941 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
97. C16C10.3 hrde-1 14922 7.561 0.971 0.949 0.958 0.949 0.955 0.949 0.915 0.915 Heritable RNAi Deficient [Source:RefSeq peptide;Acc:NP_497834]
98. F23F1.1 nfyc-1 9983 7.561 0.956 0.945 0.969 0.945 0.900 0.947 0.959 0.940 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
99. F31E3.3 rfc-4 3828 7.56 0.921 0.962 0.958 0.962 0.932 0.918 0.973 0.934 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
100. C17E4.10 C17E4.10 7034 7.559 0.957 0.905 0.967 0.905 0.970 0.966 0.984 0.905

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA