C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F08B4.5

Gene ID Gene Name Reads Transcripts Annotation
F08B4.5 pole-2 8234 F08B4.5 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]

Genes with expression patterns similar to F08B4.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F08B4.5 pole-2 8234 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
2. R12C12.2 ran-5 14517 7.736 0.967 0.985 0.985 0.985 0.975 0.958 0.936 0.945 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
3. F10E9.8 sas-4 3703 7.725 0.974 0.979 0.975 0.979 0.963 0.957 0.957 0.941 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
4. B0035.3 B0035.3 4118 7.724 0.963 0.968 0.986 0.968 0.985 0.960 0.917 0.977
5. F55G1.8 plk-3 12036 7.724 0.954 0.984 0.985 0.984 0.975 0.951 0.936 0.955 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
6. T23H2.1 npp-12 12425 7.707 0.974 0.977 0.988 0.977 0.980 0.927 0.910 0.974 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
7. F41H10.4 F41H10.4 3295 7.705 0.969 0.976 0.981 0.976 0.988 0.937 0.922 0.956
8. Y54E5A.4 npp-4 6288 7.7 0.969 0.991 0.990 0.991 0.987 0.960 0.868 0.944 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
9. F53F4.3 tbcb-1 6442 7.697 0.968 0.973 0.979 0.973 0.950 0.934 0.961 0.959 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
10. ZK686.4 snu-23 9040 7.695 0.963 0.960 0.980 0.960 0.985 0.961 0.946 0.940 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
11. C27B7.1 spr-2 14958 7.693 0.948 0.978 0.984 0.978 0.983 0.968 0.888 0.966 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
12. F32H2.4 thoc-3 3861 7.689 0.960 0.962 0.983 0.962 0.976 0.963 0.919 0.964 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
13. C05C8.6 hpo-9 8263 7.683 0.972 0.978 0.969 0.978 0.971 0.959 0.897 0.959
14. Y39G10AR.7 ekl-7 7072 7.679 0.973 0.985 0.981 0.985 0.983 0.931 0.885 0.956
15. C28H8.9 dpff-1 8684 7.66 0.973 0.976 0.977 0.976 0.975 0.947 0.872 0.964 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
16. D1081.8 cdc-5L 8553 7.659 0.958 0.967 0.992 0.967 0.980 0.948 0.887 0.960 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
17. F52C9.7 mog-3 9880 7.656 0.953 0.966 0.977 0.966 0.969 0.952 0.912 0.961 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
18. Y17G7A.1 hmg-12 29989 7.654 0.982 0.971 0.985 0.971 0.969 0.932 0.891 0.953 HMG [Source:RefSeq peptide;Acc:NP_496544]
19. E01A2.4 let-504 9788 7.651 0.961 0.976 0.949 0.976 0.990 0.955 0.897 0.947
20. Y56A3A.17 npp-16 5391 7.65 0.954 0.966 0.971 0.966 0.975 0.950 0.913 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
21. Y65B4BL.2 deps-1 18277 7.65 0.966 0.964 0.990 0.964 0.979 0.972 0.868 0.947
22. T26A5.5 jhdm-1 12698 7.647 0.963 0.974 0.975 0.974 0.988 0.945 0.879 0.949 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
23. F23F1.1 nfyc-1 9983 7.647 0.973 0.970 0.989 0.970 0.964 0.927 0.912 0.942 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
24. T19B4.2 npp-7 13073 7.645 0.966 0.965 0.972 0.965 0.994 0.953 0.902 0.928 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
25. K08E7.3 let-99 6791 7.645 0.944 0.957 0.973 0.957 0.963 0.961 0.936 0.954
26. T23B5.1 prmt-3 10677 7.645 0.948 0.983 0.988 0.983 0.968 0.888 0.939 0.948 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
27. T05H10.2 apn-1 5628 7.642 0.962 0.984 0.981 0.984 0.957 0.956 0.863 0.955 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
28. Y38A8.3 ulp-2 7403 7.641 0.985 0.967 0.977 0.967 0.989 0.941 0.865 0.950 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
29. ZK637.7 lin-9 5999 7.635 0.949 0.969 0.980 0.969 0.976 0.972 0.885 0.935
30. Y54H5A.3 tag-262 4269 7.633 0.933 0.983 0.955 0.983 0.963 0.953 0.916 0.947
31. Y71G12B.9 lin-65 7476 7.632 0.964 0.970 0.977 0.970 0.963 0.940 0.906 0.942 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
32. F56C9.6 F56C9.6 4303 7.631 0.944 0.959 0.980 0.959 0.957 0.958 0.911 0.963
33. Y54E2A.3 tac-1 6308 7.631 0.956 0.943 0.972 0.943 0.987 0.966 0.913 0.951 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
34. C02B10.5 C02B10.5 9171 7.63 0.963 0.959 0.982 0.959 0.976 0.935 0.911 0.945
35. K08E7.1 eak-7 18960 7.629 0.953 0.978 0.978 0.978 0.976 0.888 0.919 0.959 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
36. F28B3.7 him-1 18274 7.627 0.976 0.979 0.983 0.979 0.978 0.955 0.872 0.905 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
37. C25D7.8 otub-1 7941 7.627 0.973 0.960 0.976 0.960 0.982 0.924 0.892 0.960 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
38. ZK507.6 cya-1 6807 7.627 0.939 0.982 0.962 0.982 0.960 0.973 0.880 0.949 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
39. Y41D4B.19 npp-8 12992 7.624 0.965 0.969 0.988 0.969 0.952 0.913 0.899 0.969 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
40. T10F2.4 prp-19 11298 7.624 0.962 0.975 0.975 0.975 0.990 0.971 0.843 0.933 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
41. ZK1251.9 dcaf-1 10926 7.624 0.961 0.977 0.971 0.977 0.956 0.890 0.934 0.958 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
42. K11D12.2 pqn-51 15951 7.623 0.971 0.987 0.988 0.987 0.989 0.916 0.857 0.928 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
43. F36A2.1 cids-2 4551 7.623 0.951 0.964 0.966 0.964 0.976 0.970 0.875 0.957 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
44. T24F1.2 samp-1 8422 7.623 0.941 0.966 0.972 0.966 0.973 0.948 0.906 0.951 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
45. T20G5.11 rde-4 3966 7.621 0.965 0.949 0.981 0.949 0.979 0.942 0.912 0.944 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
46. F46B6.3 smg-4 4959 7.621 0.967 0.958 0.977 0.958 0.973 0.969 0.872 0.947 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
47. Y47G6A.8 crn-1 3494 7.618 0.935 0.944 0.968 0.944 0.972 0.943 0.938 0.974 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
48. D2030.6 prg-1 26751 7.617 0.947 0.932 0.980 0.932 0.984 0.950 0.917 0.975 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
49. ZK328.2 eftu-2 7040 7.615 0.949 0.964 0.959 0.964 0.959 0.963 0.913 0.944 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
50. B0464.2 ctr-9 7610 7.614 0.916 0.969 0.945 0.969 0.975 0.941 0.931 0.968 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
51. Y37A1B.1 lst-3 10739 7.614 0.939 0.958 0.969 0.958 0.977 0.943 0.900 0.970 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
52. F32H2.1 snpc-4 7581 7.613 0.966 0.971 0.958 0.971 0.983 0.912 0.908 0.944 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
53. F56D2.6 ddx-15 12282 7.612 0.949 0.973 0.979 0.973 0.983 0.924 0.895 0.936 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
54. F31E3.3 rfc-4 3828 7.61 0.942 0.981 0.973 0.981 0.965 0.946 0.914 0.908 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
55. C36B1.8 gls-1 8617 7.609 0.960 0.969 0.965 0.969 0.980 0.940 0.899 0.927 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
56. C08B11.5 sap-49 10553 7.609 0.943 0.974 0.960 0.974 0.984 0.940 0.898 0.936 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
57. F59E10.1 orc-2 4698 7.608 0.938 0.967 0.978 0.967 0.932 0.952 0.936 0.938 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
58. T05E8.3 let-355 8169 7.606 0.928 0.964 0.962 0.964 0.976 0.945 0.936 0.931
59. T21B10.4 T21B10.4 11648 7.606 0.975 0.940 0.986 0.940 0.976 0.971 0.901 0.917
60. W02F12.6 sna-1 7338 7.606 0.966 0.971 0.976 0.971 0.976 0.922 0.912 0.912 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
61. T06A10.4 lsy-13 7631 7.605 0.952 0.970 0.973 0.970 0.983 0.941 0.905 0.911
62. F58D5.4 ksr-2 5973 7.605 0.912 0.968 0.969 0.968 0.977 0.978 0.869 0.964 Kinase suppressor of Ras B [Source:UniProtKB/Swiss-Prot;Acc:G5EDA5]
63. T12E12.2 cec-6 4758 7.601 0.949 0.971 0.976 0.971 0.973 0.964 0.860 0.937 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
64. Y46G5A.4 snrp-200 13827 7.599 0.956 0.962 0.974 0.962 0.978 0.938 0.893 0.936 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
65. C17E4.10 C17E4.10 7034 7.599 0.962 0.954 0.977 0.954 0.975 0.957 0.902 0.918
66. K07A12.2 egg-6 18331 7.599 0.895 0.971 0.956 0.971 0.977 0.956 0.938 0.935 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
67. C33H5.15 sgo-1 3674 7.598 0.946 0.968 0.963 0.968 0.979 0.928 0.889 0.957 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
68. C37A2.2 pqn-20 10913 7.597 0.960 0.981 0.967 0.981 0.968 0.932 0.865 0.943 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
69. F56F3.1 ifet-1 25772 7.592 0.956 0.961 0.966 0.961 0.976 0.947 0.883 0.942 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
70. F36D4.3 hum-2 16493 7.592 0.971 0.974 0.977 0.974 0.972 0.944 0.860 0.920 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
71. Y37E3.15 npp-13 7250 7.592 0.962 0.977 0.964 0.977 0.958 0.943 0.877 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
72. Y80D3A.2 emb-4 3717 7.592 0.933 0.946 0.933 0.946 0.970 0.962 0.935 0.967
73. Y32F6A.1 set-22 2474 7.591 0.955 0.955 0.947 0.955 0.969 0.960 0.908 0.942 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]
74. C48E7.3 lpd-2 10330 7.59 0.954 0.967 0.989 0.967 0.963 0.915 0.890 0.945 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
75. F25B3.6 rtfo-1 11965 7.587 0.911 0.965 0.952 0.965 0.971 0.953 0.926 0.944 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
76. K01G5.4 ran-1 32379 7.587 0.969 0.967 0.968 0.967 0.975 0.935 0.889 0.917 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
77. Y53C12B.3 nos-3 20231 7.587 0.955 0.971 0.970 0.971 0.966 0.900 0.928 0.926 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
78. F28C6.6 suf-1 3642 7.586 0.939 0.959 0.961 0.959 0.981 0.936 0.892 0.959 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
79. C13G5.2 C13G5.2 3532 7.585 0.969 0.935 0.979 0.935 0.947 0.956 0.894 0.970
80. F37E3.1 ncbp-1 5649 7.584 0.967 0.975 0.975 0.975 0.960 0.940 0.897 0.895 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
81. F29C4.6 tut-1 5637 7.584 0.924 0.952 0.953 0.952 0.974 0.945 0.912 0.972 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
82. K06A5.7 cdc-25.1 14961 7.583 0.904 0.973 0.976 0.973 0.971 0.955 0.894 0.937 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
83. F18E2.3 scc-3 13464 7.582 0.977 0.977 0.973 0.977 0.944 0.921 0.851 0.962 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
84. T04A8.14 emb-5 11746 7.582 0.966 0.979 0.971 0.979 0.982 0.935 0.836 0.934 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
85. R02D3.5 fnta-1 5258 7.582 0.966 0.973 0.970 0.973 0.973 0.950 0.839 0.938 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
86. F18C5.2 wrn-1 3792 7.581 0.915 0.976 0.978 0.976 0.970 0.928 0.900 0.938 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
87. K08F11.5 miro-1 4512 7.581 0.979 0.949 0.948 0.949 0.962 0.958 0.922 0.914 Mitochondrial Rho GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94263]
88. H27M09.3 syp-4 5331 7.579 0.967 0.948 0.937 0.948 0.977 0.926 0.900 0.976
89. T05F1.6 hsr-9 13312 7.578 0.980 0.980 0.987 0.980 0.970 0.910 0.868 0.903
90. F59A2.1 npp-9 34375 7.578 0.960 0.978 0.981 0.978 0.953 0.898 0.886 0.944 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
91. F07A11.3 npp-5 2549 7.577 0.964 0.963 0.990 0.963 0.930 0.963 0.912 0.892 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496481]
92. T12E12.4 drp-1 7694 7.577 0.959 0.984 0.985 0.984 0.964 0.917 0.869 0.915 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
93. F25B5.2 nop-1 4127 7.577 0.976 0.964 0.969 0.964 0.987 0.946 0.819 0.952 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
94. T12D8.3 acbp-5 6816 7.577 0.935 0.961 0.981 0.961 0.980 0.922 0.893 0.944 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
95. B0336.1 wrm-1 8284 7.576 0.959 0.955 0.979 0.955 0.946 0.900 0.919 0.963 Armadillo repeat-containing protein wrm-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10953]
96. C34E10.5 prmt-5 12277 7.575 0.964 0.953 0.969 0.953 0.985 0.935 0.901 0.915 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
97. Y39G10AL.3 cdk-7 3495 7.575 0.958 0.966 0.972 0.966 0.967 0.927 0.888 0.931 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
98. F45E12.2 brf-1 4667 7.575 0.967 0.977 0.963 0.977 0.933 0.899 0.906 0.953 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
99. T05H4.14 gad-1 7979 7.574 0.942 0.968 0.970 0.968 0.975 0.950 0.910 0.891 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
100. T25G3.3 T25G3.3 7285 7.574 0.950 0.958 0.937 0.958 0.973 0.953 0.879 0.966

There are 3236 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA