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Results for Y39E4B.1

Gene ID Gene Name Reads Transcripts Annotation
Y39E4B.1 abce-1 4178 Y39E4B.1.1, Y39E4B.1.2 ABC transporter, class E [Source:RefSeq peptide;Acc:NP_499717]

Genes with expression patterns similar to Y39E4B.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y39E4B.1 abce-1 4178 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ABC transporter, class E [Source:RefSeq peptide;Acc:NP_499717]
2. F57B9.5 byn-1 58236 7.682 0.979 0.931 0.956 0.931 0.979 0.984 0.966 0.956 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
3. D2013.7 eif-3.F 21004 7.675 0.953 0.952 0.945 0.952 0.988 0.962 0.955 0.968 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
4. B0464.1 dars-1 12331 7.653 0.966 0.940 0.970 0.940 0.979 0.978 0.945 0.935 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
5. Y65B4BR.5 icd-2 58321 7.647 0.979 0.934 0.958 0.934 0.975 0.980 0.927 0.960 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
6. F22B5.9 fars-3 7209 7.647 0.966 0.933 0.965 0.933 0.982 0.961 0.947 0.960 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
7. T17E9.2 nmt-1 8017 7.644 0.961 0.940 0.961 0.940 0.980 0.982 0.948 0.932 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
8. W09C5.7 W09C5.7 2359 7.641 0.983 0.918 0.943 0.918 0.988 0.984 0.941 0.966
9. C26D10.2 hel-1 28697 7.64 0.949 0.938 0.969 0.938 0.971 0.976 0.953 0.946 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
10. T08B2.9 fars-1 12650 7.637 0.970 0.941 0.953 0.941 0.971 0.971 0.941 0.949 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
11. Y54E10A.9 vbh-1 28746 7.637 0.976 0.941 0.968 0.941 0.962 0.973 0.927 0.949 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
12. F56B3.12 skr-18 6534 7.622 0.976 0.930 0.941 0.930 0.976 0.964 0.953 0.952 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
13. C47D12.6 tars-1 23488 7.621 0.943 0.941 0.939 0.941 0.983 0.981 0.927 0.966 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
14. T16G1.11 eif-3.K 14014 7.621 0.953 0.931 0.952 0.931 0.986 0.982 0.938 0.948 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
15. Y40B1B.5 eif-3.J 15061 7.62 0.948 0.930 0.971 0.930 0.982 0.978 0.940 0.941 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
16. K07A12.7 mrps-15 6325 7.619 0.951 0.943 0.941 0.943 0.989 0.984 0.950 0.918 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
17. K08F11.3 cif-1 10218 7.612 0.952 0.921 0.974 0.921 0.982 0.992 0.943 0.927 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
18. K04G2.1 iftb-1 12590 7.611 0.950 0.947 0.939 0.947 0.971 0.970 0.957 0.930 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
19. C18E9.6 tomm-40 13426 7.611 0.967 0.934 0.944 0.934 0.978 0.982 0.920 0.952 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
20. C09D4.5 rpl-19 56944 7.609 0.957 0.933 0.948 0.933 0.976 0.971 0.944 0.947 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
21. F53A3.3 rps-22 81093 7.608 0.949 0.931 0.944 0.931 0.969 0.969 0.940 0.975 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
22. T12D8.2 drr-2 16208 7.6 0.922 0.944 0.957 0.944 0.971 0.989 0.931 0.942 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
23. F17C11.9 eef-1G 37911 7.592 0.958 0.936 0.968 0.936 0.967 0.962 0.935 0.930 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
24. T02G5.9 kars-1 9763 7.591 0.962 0.926 0.950 0.926 0.981 0.982 0.955 0.909 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
25. Y39G10AR.9 Y39G10AR.9 3972 7.591 0.962 0.898 0.949 0.898 0.983 0.986 0.973 0.942
26. C53D5.6 imb-3 28921 7.589 0.964 0.946 0.949 0.946 0.985 0.977 0.926 0.896 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
27. T21C9.12 scpl-4 14723 7.586 0.952 0.921 0.952 0.921 0.990 0.979 0.889 0.982 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
28. K04D7.2 mspn-1 48187 7.586 0.971 0.907 0.962 0.907 0.974 0.977 0.936 0.952 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
29. F39B2.10 dnj-12 35162 7.586 0.967 0.945 0.957 0.945 0.936 0.966 0.909 0.961 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
30. Y62E10A.1 rla-2 59665 7.584 0.965 0.942 0.941 0.942 0.965 0.957 0.933 0.939 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
31. T01E8.6 mrps-14 9328 7.584 0.961 0.939 0.958 0.939 0.961 0.953 0.938 0.935 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
32. B0336.9 swp-1 52442 7.583 0.957 0.928 0.933 0.928 0.972 0.968 0.938 0.959 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
33. T05H4.6 erfa-1 12542 7.581 0.961 0.910 0.956 0.910 0.979 0.964 0.969 0.932 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
34. F26F4.10 rars-1 9971 7.58 0.931 0.919 0.950 0.919 0.991 0.984 0.940 0.946 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
35. Y18D10A.19 fkb-2 48128 7.577 0.968 0.909 0.963 0.909 0.972 0.954 0.941 0.961 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
36. H06H21.3 eif-1.A 40990 7.575 0.973 0.947 0.970 0.947 0.938 0.951 0.905 0.944 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
37. T20H4.3 pars-1 8167 7.567 0.954 0.921 0.909 0.921 0.963 0.979 0.949 0.971 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
38. ZK652.1 snr-5 5993 7.566 0.957 0.923 0.948 0.923 0.979 0.963 0.921 0.952 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
39. F42A6.7 hrp-1 28201 7.564 0.923 0.930 0.929 0.930 0.977 0.979 0.929 0.967 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
40. F22D6.3 nars-1 18624 7.562 0.940 0.921 0.927 0.921 0.989 0.982 0.942 0.940 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
41. R144.7 larp-1 24669 7.562 0.956 0.933 0.932 0.933 0.976 0.981 0.909 0.942 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
42. T12D8.8 hip-1 18283 7.558 0.920 0.920 0.947 0.920 0.979 0.983 0.933 0.956 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
43. T27F7.3 eif-1 28176 7.556 0.962 0.904 0.955 0.904 0.976 0.954 0.966 0.935 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
44. C32E8.2 rpl-13 70096 7.555 0.949 0.924 0.932 0.924 0.958 0.965 0.941 0.962 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
45. Y111B2A.18 rsp-3 43731 7.555 0.913 0.929 0.905 0.929 0.984 0.969 0.963 0.963 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
46. T24H7.1 phb-2 28775 7.552 0.954 0.933 0.945 0.933 0.979 0.951 0.899 0.958 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
47. Y102A5A.1 cand-1 11808 7.55 0.956 0.928 0.943 0.928 0.964 0.958 0.925 0.948 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
48. C06E7.1 sams-3 26921 7.549 0.952 0.935 0.943 0.935 0.982 0.976 0.912 0.914 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
49. C18D11.4 rsp-8 18308 7.548 0.910 0.944 0.916 0.944 0.974 0.969 0.954 0.937 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
50. B0205.7 kin-3 29775 7.548 0.969 0.940 0.944 0.940 0.932 0.939 0.935 0.949 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
51. Y18D10A.25 fkb-8 8968 7.546 0.966 0.900 0.955 0.900 0.943 0.958 0.954 0.970 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
52. T10F2.4 prp-19 11298 7.545 0.934 0.946 0.920 0.946 0.983 0.986 0.929 0.901 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
53. Y34D9A.1 mrpl-38 5291 7.545 0.938 0.931 0.935 0.931 0.985 0.991 0.898 0.936 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
54. F46A9.4 skr-2 16831 7.542 0.948 0.925 0.929 0.925 0.983 0.969 0.935 0.928 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
55. F53G12.10 rpl-7 78552 7.542 0.935 0.923 0.939 0.923 0.963 0.968 0.953 0.938 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
56. H19N07.1 erfa-3 19869 7.542 0.954 0.931 0.959 0.931 0.984 0.975 0.877 0.931 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
57. F25H5.4 eef-2 34846 7.54 0.968 0.914 0.930 0.914 0.982 0.956 0.929 0.947 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
58. F56F3.5 rps-1 85503 7.54 0.933 0.931 0.924 0.931 0.967 0.975 0.930 0.949 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
59. W04D2.5 mrps-11 5757 7.538 0.965 0.916 0.962 0.916 0.978 0.910 0.946 0.945 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
60. B0511.10 eif-3.E 10041 7.537 0.963 0.919 0.911 0.919 0.958 0.975 0.955 0.937 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
61. R07G3.5 pgam-5 11646 7.537 0.891 0.943 0.937 0.943 0.956 0.986 0.942 0.939 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
62. Y116A8C.35 uaf-2 13808 7.536 0.922 0.919 0.939 0.919 0.981 0.961 0.931 0.964 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
63. K04D7.1 rack-1 48949 7.535 0.962 0.904 0.939 0.904 0.967 0.961 0.942 0.956 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
64. F08F8.3 kap-1 31437 7.535 0.953 0.948 0.956 0.948 0.972 0.924 0.908 0.926 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
65. F45H11.2 ned-8 13247 7.535 0.921 0.930 0.921 0.930 0.973 0.966 0.941 0.953 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
66. F28H1.3 aars-2 13537 7.532 0.919 0.957 0.918 0.957 0.965 0.962 0.922 0.932 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
67. ZK652.2 tomm-7 8594 7.531 0.963 0.916 0.945 0.916 0.986 0.974 0.918 0.913 Mitochondrial import receptor subunit TOM7 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34660]
68. C56C10.8 icd-1 89788 7.528 0.933 0.920 0.937 0.920 0.971 0.981 0.925 0.941 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
69. T10F2.1 gars-1 7204 7.527 0.940 0.929 0.934 0.929 0.962 0.973 0.911 0.949 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
70. W02B12.3 rsp-1 9235 7.526 0.935 0.933 0.920 0.933 0.964 0.972 0.921 0.948 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
71. F58D5.1 hrp-2 17211 7.525 0.940 0.931 0.932 0.931 0.965 0.976 0.893 0.957 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
72. Y66D12A.22 tin-10 6041 7.525 0.969 0.911 0.888 0.911 0.982 0.986 0.963 0.915 Mitochondrial import inner membrane translocase subunit Tim10 [Source:UniProtKB/Swiss-Prot;Acc:Q9Y0V6]
73. R11D1.8 rpl-28 62242 7.524 0.958 0.909 0.921 0.909 0.975 0.967 0.936 0.949 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
74. F56D12.5 vig-1 42594 7.523 0.967 0.929 0.950 0.929 0.966 0.961 0.897 0.924 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
75. Y73B6BL.6 sqd-1 41708 7.523 0.973 0.938 0.949 0.938 0.952 0.918 0.923 0.932 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
76. R13F6.10 cra-1 11610 7.523 0.950 0.952 0.952 0.952 0.979 0.979 0.858 0.901 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
77. H21P03.1 mbf-1 25586 7.522 0.982 0.929 0.954 0.929 0.951 0.928 0.909 0.940 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
78. Y46G5A.4 snrp-200 13827 7.52 0.885 0.956 0.927 0.956 0.983 0.974 0.908 0.931 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
79. JC8.3 rpl-12 52728 7.518 0.944 0.913 0.930 0.913 0.973 0.959 0.926 0.960 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
80. F42A10.1 abcf-3 5557 7.517 0.939 0.913 0.969 0.913 0.978 0.984 0.925 0.896 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
81. T24B8.1 rpl-32 67285 7.517 0.958 0.926 0.921 0.926 0.958 0.910 0.949 0.969 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
82. ZK616.6 perm-3 16186 7.517 0.928 0.919 0.938 0.919 0.979 0.977 0.960 0.897 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
83. Y54E2A.11 eif-3.B 13795 7.515 0.963 0.930 0.947 0.930 0.943 0.934 0.942 0.926 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
84. C41D11.2 eif-3.H 7520 7.515 0.975 0.904 0.936 0.904 0.967 0.983 0.918 0.928 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
85. ZK1010.1 ubq-2 87842 7.515 0.927 0.931 0.943 0.931 0.952 0.949 0.922 0.960 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
86. T27E9.7 abcf-2 40273 7.514 0.967 0.925 0.953 0.925 0.956 0.905 0.939 0.944 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
87. Y57G11C.16 rps-18 76576 7.513 0.967 0.917 0.915 0.917 0.960 0.947 0.962 0.928 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
88. Y39A1C.3 cey-4 50694 7.513 0.961 0.929 0.933 0.929 0.964 0.929 0.919 0.949 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
89. F21C3.3 hint-1 7078 7.51 0.951 0.915 0.910 0.915 0.966 0.962 0.945 0.946 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
90. T06A10.4 lsy-13 7631 7.509 0.972 0.919 0.941 0.919 0.977 0.954 0.911 0.916
91. T23D8.4 eif-3.C 15343 7.509 0.948 0.915 0.951 0.915 0.959 0.983 0.889 0.949 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
92. T08B2.10 rps-17 38071 7.508 0.969 0.890 0.935 0.890 0.974 0.959 0.956 0.935 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
93. H20J04.5 pfd-2 8082 7.507 0.969 0.940 0.949 0.940 0.955 0.950 0.897 0.907 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
94. F36A4.7 ama-1 13620 7.507 0.891 0.922 0.942 0.922 0.983 0.988 0.910 0.949 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
95. C34E10.5 prmt-5 12277 7.506 0.944 0.923 0.943 0.923 0.973 0.972 0.918 0.910 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
96. K01C8.10 cct-4 15077 7.504 0.927 0.922 0.947 0.922 0.964 0.946 0.936 0.940 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
97. F10G8.3 rae-1 7542 7.502 0.957 0.902 0.932 0.902 0.989 0.974 0.880 0.966 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
98. ZC262.8 mrps-18A 3125 7.502 0.954 0.924 0.959 0.924 0.960 0.968 0.917 0.896 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498835]
99. F13G3.4 dylt-1 21345 7.497 0.946 0.927 0.938 0.927 0.970 0.959 0.928 0.902 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
100. K03B4.2 K03B4.2 21796 7.496 0.950 0.911 0.929 0.911 0.979 0.956 0.933 0.927

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA