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Results for BE0003N10.2

Gene ID Gene Name Reads Transcripts Annotation
BE0003N10.2 chin-1 3318 BE0003N10.2 CHImaeriN (Rac-GTPase-activating protein) homolog [Source:RefSeq peptide;Acc:NP_497323]

Genes with expression patterns similar to BE0003N10.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. BE0003N10.2 chin-1 3318 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CHImaeriN (Rac-GTPase-activating protein) homolog [Source:RefSeq peptide;Acc:NP_497323]
2. Y37D8A.11 cec-7 8801 7.534 0.954 0.981 0.955 0.981 0.928 0.908 0.951 0.876 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
3. K07A1.12 lin-53 15817 7.521 0.915 0.967 0.957 0.967 0.940 0.972 0.958 0.845 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
4. Y14H12B.2 Y14H12B.2 6496 7.489 0.913 0.973 0.962 0.973 0.956 0.959 0.959 0.794
5. F09G2.9 attf-2 14771 7.484 0.953 0.969 0.938 0.969 0.919 0.975 0.931 0.830 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
6. H27M09.2 rpb-5 4744 7.476 0.970 0.944 0.924 0.944 0.954 0.949 0.946 0.845 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
7. T28D9.2 rsp-5 6460 7.465 0.941 0.968 0.954 0.968 0.930 0.933 0.916 0.855 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
8. ZK1010.3 frg-1 3533 7.459 0.932 0.971 0.954 0.971 0.857 0.917 0.938 0.919 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
9. Y73B6BL.3 exos-2 2624 7.455 0.965 0.973 0.962 0.973 0.923 0.940 0.931 0.788 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
10. R07E5.14 rnp-4 11659 7.445 0.942 0.966 0.940 0.966 0.868 0.956 0.941 0.866 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
11. Y53C12B.2 Y53C12B.2 6115 7.439 0.913 0.960 0.948 0.960 0.936 0.948 0.969 0.805 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
12. C34D4.12 cyn-12 7363 7.436 0.953 0.960 0.936 0.960 0.919 0.952 0.953 0.803 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
13. K01G5.2 hpl-2 6781 7.434 0.912 0.971 0.953 0.971 0.894 0.918 0.955 0.860 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
14. F53F4.12 F53F4.12 2683 7.434 0.921 0.979 0.920 0.979 0.945 0.953 0.931 0.806
15. B0513.2 B0513.2 3641 7.433 0.927 0.954 0.899 0.954 0.968 0.951 0.963 0.817
16. F10E7.6 F10E7.6 2788 7.43 0.950 0.947 0.905 0.947 0.925 0.944 0.965 0.847
17. Y116A8C.42 snr-1 17062 7.429 0.946 0.971 0.947 0.971 0.890 0.903 0.938 0.863 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
18. K08F4.2 gtbp-1 25222 7.422 0.944 0.966 0.931 0.966 0.907 0.944 0.961 0.803 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
19. C01F6.8 icln-1 6586 7.42 0.919 0.954 0.955 0.954 0.883 0.931 0.957 0.867 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
20. C48E7.2 let-611 2191 7.419 0.896 0.935 0.940 0.935 0.953 0.950 0.913 0.897
21. F58E10.3 ddx-17 15107 7.417 0.921 0.983 0.948 0.983 0.890 0.944 0.898 0.850 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
22. M01E11.5 cey-3 20931 7.415 0.952 0.970 0.955 0.970 0.899 0.932 0.934 0.803 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
23. F01F1.8 cct-6 29460 7.415 0.932 0.968 0.946 0.968 0.898 0.970 0.947 0.786 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
24. T05H4.11 T05H4.11 12835 7.413 0.876 0.965 0.914 0.965 0.951 0.958 0.939 0.845
25. F43G9.5 cfim-1 9169 7.412 0.956 0.957 0.956 0.957 0.876 0.963 0.933 0.814 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
26. F21C3.4 rde-2 6286 7.409 0.905 0.980 0.939 0.980 0.931 0.959 0.925 0.790
27. T23G11.3 gld-1 41748 7.407 0.955 0.982 0.948 0.982 0.898 0.929 0.957 0.756 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
28. F23F1.1 nfyc-1 9983 7.407 0.922 0.959 0.950 0.959 0.915 0.926 0.893 0.883 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
29. Y37D8A.9 mrg-1 14369 7.404 0.913 0.973 0.951 0.973 0.896 0.926 0.952 0.820 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
30. F53A2.4 nud-1 7818 7.402 0.965 0.947 0.951 0.947 0.920 0.959 0.939 0.774 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
31. T20B12.1 trd-1 2860 7.4 0.916 0.952 0.949 0.952 0.925 0.927 0.919 0.860 Tetratricopeptide repeat-containing protein trd-1 [Source:UniProtKB/Swiss-Prot;Acc:P41842]
32. B0035.12 sart-3 7188 7.4 0.932 0.977 0.946 0.977 0.951 0.963 0.908 0.746 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
33. K11H3.6 mrpl-36 7328 7.398 0.939 0.962 0.933 0.962 0.936 0.937 0.902 0.827 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
34. F58B3.5 mars-1 6729 7.394 0.944 0.956 0.902 0.956 0.877 0.916 0.958 0.885 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
35. R74.8 R74.8 7722 7.39 0.932 0.976 0.934 0.976 0.834 0.956 0.957 0.825
36. T06A10.4 lsy-13 7631 7.387 0.950 0.962 0.946 0.962 0.814 0.908 0.929 0.916
37. Y23H5B.6 Y23H5B.6 5886 7.384 0.937 0.974 0.924 0.974 0.921 0.938 0.890 0.826
38. ZK1128.6 ttll-4 6059 7.381 0.909 0.975 0.959 0.975 0.933 0.928 0.926 0.776 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
39. Y71G12B.9 lin-65 7476 7.376 0.899 0.974 0.936 0.974 0.926 0.905 0.951 0.811 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
40. K04G7.11 K04G7.11 6153 7.373 0.851 0.968 0.935 0.968 0.947 0.942 0.911 0.851 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
41. Y43F4B.3 set-25 8036 7.368 0.908 0.968 0.944 0.968 0.925 0.957 0.900 0.798 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
42. Y55F3AR.3 cct-8 17979 7.364 0.941 0.945 0.924 0.945 0.920 0.966 0.907 0.816 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
43. F59B2.3 F59B2.3 2013 7.362 0.944 0.941 0.932 0.941 0.961 0.942 0.915 0.786 Putative N-acetylglucosamine-6-phosphate deacetylase [Source:UniProtKB/Swiss-Prot;Acc:P34480]
44. Y53C12B.3 nos-3 20231 7.361 0.942 0.970 0.969 0.970 0.884 0.897 0.928 0.801 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
45. K08D10.4 rnp-2 2338 7.358 0.942 0.950 0.894 0.950 0.848 0.946 0.946 0.882 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500504]
46. Y18D10A.17 car-1 87364 7.357 0.952 0.947 0.929 0.947 0.924 0.959 0.929 0.770 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
47. Y62E10A.12 lsm-3 4322 7.357 0.951 0.931 0.913 0.931 0.947 0.964 0.952 0.768 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
48. C07H6.5 cgh-1 60576 7.354 0.923 0.949 0.939 0.949 0.891 0.950 0.950 0.803 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
49. C34E10.2 gop-2 5684 7.353 0.945 0.971 0.962 0.971 0.912 0.966 0.910 0.716 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
50. T28D9.10 snr-3 9995 7.352 0.947 0.973 0.876 0.973 0.879 0.952 0.940 0.812 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
51. R06A4.4 imb-2 10302 7.351 0.948 0.963 0.966 0.963 0.867 0.940 0.935 0.769 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
52. K01G5.1 rnf-113 4336 7.351 0.927 0.959 0.931 0.959 0.921 0.928 0.886 0.840 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
53. D2007.4 mrpl-18 2880 7.349 0.907 0.938 0.930 0.938 0.849 0.958 0.923 0.906 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
54. K01G5.4 ran-1 32379 7.349 0.931 0.970 0.924 0.970 0.869 0.901 0.904 0.880 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
55. F44E2.8 F44E2.8 12814 7.348 0.898 0.982 0.966 0.982 0.938 0.928 0.930 0.724
56. Y39E4B.2 snpc-1.2 5800 7.343 0.932 0.965 0.954 0.965 0.951 0.908 0.971 0.697 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
57. F58G11.6 ccz-1 5655 7.343 0.900 0.972 0.942 0.972 0.857 0.946 0.935 0.819
58. E02H1.6 E02H1.6 1278 7.341 0.922 0.916 0.965 0.916 0.872 0.961 0.866 0.923 Adenylate kinase isoenzyme 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09527]
59. C26E6.7 eri-9 8069 7.34 0.916 0.964 0.940 0.964 0.899 0.948 0.925 0.784 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
60. Y54E5A.4 npp-4 6288 7.339 0.952 0.959 0.955 0.959 0.896 0.870 0.885 0.863 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
61. C49H3.10 xpo-3 9101 7.336 0.945 0.962 0.957 0.962 0.938 0.955 0.904 0.713 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
62. T19C3.8 fem-2 9225 7.335 0.910 0.955 0.970 0.955 0.872 0.928 0.870 0.875 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
63. R05D11.8 edc-3 5244 7.334 0.916 0.958 0.953 0.958 0.923 0.905 0.905 0.816 yeast Enhancer of DeCapping homolog [Source:RefSeq peptide;Acc:NP_492328]
64. F44G4.4 tdp-1 3335 7.332 0.914 0.943 0.956 0.943 0.934 0.964 0.941 0.737 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
65. T25G3.4 T25G3.4 9394 7.332 0.926 0.953 0.942 0.953 0.942 0.945 0.954 0.717 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
66. F39B2.1 hinf-1 10002 7.331 0.889 0.966 0.959 0.966 0.927 0.948 0.844 0.832 HIstone Nuclear Factor p (P) homolog [Source:RefSeq peptide;Acc:NP_493579]
67. C02B10.5 C02B10.5 9171 7.33 0.954 0.950 0.973 0.950 0.852 0.928 0.861 0.862
68. C09G5.2 dph-2 2159 7.33 0.870 0.942 0.943 0.942 0.955 0.934 0.882 0.862 Diphthamide biosynthesis protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09454]
69. Y55F3AM.12 dcap-1 8679 7.33 0.974 0.973 0.960 0.973 0.915 0.906 0.962 0.667 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
70. R09B3.1 exo-3 4401 7.328 0.934 0.954 0.968 0.954 0.878 0.952 0.889 0.799 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
71. Y39G10AR.7 ekl-7 7072 7.328 0.943 0.954 0.947 0.954 0.861 0.898 0.897 0.874
72. T19B4.2 npp-7 13073 7.326 0.958 0.970 0.970 0.970 0.860 0.892 0.932 0.774 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
73. B0205.9 B0205.9 3651 7.324 0.921 0.969 0.928 0.969 0.821 0.962 0.925 0.829
74. Y47D3A.26 smc-3 6256 7.322 0.894 0.971 0.967 0.971 0.908 0.941 0.928 0.742 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
75. C23G10.8 C23G10.8 4642 7.322 0.893 0.980 0.943 0.980 0.868 0.930 0.932 0.796
76. F31E3.3 rfc-4 3828 7.322 0.930 0.968 0.956 0.968 0.829 0.869 0.883 0.919 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
77. F22B5.9 fars-3 7209 7.321 0.962 0.932 0.904 0.932 0.853 0.955 0.898 0.885 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
78. Y38C9A.2 cgp-1 11756 7.32 0.922 0.955 0.969 0.955 0.878 0.959 0.925 0.757 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
79. C08F8.1 pfd-1 10199 7.319 0.949 0.961 0.874 0.961 0.909 0.945 0.928 0.792 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
80. ZK863.6 dpy-30 16177 7.319 0.928 0.971 0.920 0.971 0.857 0.901 0.897 0.874 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
81. C48B6.3 C48B6.3 6610 7.319 0.957 0.935 0.952 0.935 0.898 0.963 0.906 0.773
82. R12C12.2 ran-5 14517 7.317 0.951 0.953 0.963 0.953 0.845 0.870 0.904 0.878 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
83. R74.7 R74.7 2689 7.316 0.929 0.976 0.983 0.976 0.887 0.953 0.873 0.739 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q22031]
84. R06C7.5 adsl-1 3236 7.315 0.926 0.923 0.919 0.923 0.901 0.973 0.955 0.795 Adenylosuccinate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q21774]
85. Y17G7B.5 mcm-2 6246 7.315 0.869 0.950 0.953 0.950 0.936 0.848 0.922 0.887 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
86. Y54E5A.6 Y54E5A.6 770 7.314 0.907 0.957 0.942 0.957 0.903 0.942 0.916 0.790
87. Y116A8C.34 cyn-13 2972 7.314 0.977 0.961 0.928 0.961 0.809 0.930 0.917 0.831 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
88. F35G12.12 F35G12.12 5761 7.314 0.929 0.959 0.925 0.959 0.948 0.891 0.861 0.842
89. T07D4.4 ddx-19 7234 7.313 0.945 0.918 0.919 0.918 0.855 0.954 0.925 0.879 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
90. W08E3.1 snr-2 14849 7.312 0.972 0.956 0.941 0.956 0.821 0.936 0.931 0.799 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
91. ZK856.9 zhit-3 2552 7.312 0.923 0.966 0.891 0.966 0.955 0.940 0.796 0.875 Zinc finger, HIT-type [Source:RefSeq peptide;Acc:NP_505627]
92. K11D12.2 pqn-51 15951 7.312 0.952 0.968 0.958 0.968 0.860 0.914 0.872 0.820 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
93. Y75B8A.16 Y75B8A.16 1406 7.312 0.925 0.961 0.887 0.961 0.884 0.930 0.945 0.819
94. C06A8.4 skr-17 2589 7.31 0.968 0.959 0.935 0.959 0.857 0.911 0.819 0.902 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
95. ZK863.3 elpc-3 1612 7.31 0.872 0.930 0.860 0.930 0.907 0.942 0.960 0.909 Probable elongator complex protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q23651]
96. Y38A8.3 ulp-2 7403 7.31 0.932 0.960 0.961 0.960 0.859 0.903 0.835 0.900 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
97. R03D7.7 nos-1 8407 7.309 0.870 0.955 0.928 0.955 0.876 0.894 0.921 0.910 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
98. F56F3.1 ifet-1 25772 7.309 0.948 0.975 0.954 0.975 0.851 0.895 0.898 0.813 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
99. T14G10.6 tsp-12 10308 7.308 0.883 0.945 0.921 0.945 0.895 0.966 0.907 0.846 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
100. W01G7.3 rpb-11 7826 7.307 0.943 0.977 0.949 0.977 0.799 0.905 0.882 0.875 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA