C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T20B12.1

Gene ID Gene Name Reads Transcripts Annotation
T20B12.1 trd-1 2860 T20B12.1 Tetratricopeptide repeat-containing protein trd-1 [Source:UniProtKB/Swiss-Prot;Acc:P41842]

Genes with expression patterns similar to T20B12.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T20B12.1 trd-1 2860 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Tetratricopeptide repeat-containing protein trd-1 [Source:UniProtKB/Swiss-Prot;Acc:P41842]
2. D2023.5 mpst-1 10328 7.626 0.919 0.967 0.944 0.967 0.966 0.960 0.941 0.962 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
3. C34D4.12 cyn-12 7363 7.615 0.937 0.953 0.940 0.953 0.956 0.935 0.975 0.966 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
4. W08E3.1 snr-2 14849 7.611 0.925 0.958 0.946 0.958 0.937 0.956 0.953 0.978 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
5. Y53C12B.2 Y53C12B.2 6115 7.598 0.922 0.963 0.982 0.963 0.937 0.979 0.950 0.902 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
6. Y116A8C.42 snr-1 17062 7.597 0.937 0.964 0.952 0.964 0.976 0.915 0.939 0.950 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
7. H27M09.2 rpb-5 4744 7.593 0.917 0.946 0.953 0.946 0.981 0.943 0.937 0.970 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
8. F10G7.1 tag-151 9031 7.588 0.929 0.969 0.956 0.969 0.973 0.921 0.963 0.908 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
9. Y23H5B.6 Y23H5B.6 5886 7.585 0.942 0.980 0.910 0.980 0.958 0.937 0.921 0.957
10. F53A2.4 nud-1 7818 7.581 0.932 0.938 0.948 0.938 0.988 0.954 0.945 0.938 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
11. C06A1.5 rpb-6 7515 7.576 0.908 0.969 0.934 0.969 0.973 0.958 0.928 0.937 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
12. T23G11.3 gld-1 41748 7.573 0.946 0.952 0.941 0.952 0.967 0.945 0.935 0.935 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
13. Y54H5A.2 Y54H5A.2 2168 7.572 0.948 0.941 0.950 0.941 0.962 0.952 0.919 0.959
14. T28D9.2 rsp-5 6460 7.564 0.889 0.971 0.939 0.971 0.986 0.947 0.910 0.951 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
15. C25A1.10 dao-5 18351 7.562 0.913 0.951 0.947 0.951 0.979 0.921 0.925 0.975 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
16. T01E8.6 mrps-14 9328 7.558 0.918 0.962 0.951 0.962 0.930 0.965 0.926 0.944 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
17. T02G5.9 kars-1 9763 7.557 0.922 0.974 0.937 0.974 0.949 0.921 0.952 0.928 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
18. Y37D8A.11 cec-7 8801 7.557 0.945 0.961 0.952 0.961 0.964 0.928 0.929 0.917 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
19. Y14H12B.2 Y14H12B.2 6496 7.555 0.873 0.958 0.933 0.958 0.976 0.969 0.927 0.961
20. C01F6.8 icln-1 6586 7.546 0.904 0.948 0.962 0.948 0.974 0.935 0.931 0.944 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
21. C34E10.2 gop-2 5684 7.544 0.894 0.956 0.960 0.956 0.972 0.938 0.940 0.928 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
22. Y47D3A.26 smc-3 6256 7.541 0.905 0.948 0.936 0.948 0.962 0.951 0.957 0.934 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
23. C05D11.10 mrps-17 4613 7.54 0.868 0.970 0.935 0.970 0.904 0.979 0.969 0.945 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
24. K08F4.2 gtbp-1 25222 7.539 0.919 0.957 0.957 0.957 0.954 0.907 0.952 0.936 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
25. F22B5.9 fars-3 7209 7.535 0.937 0.955 0.941 0.955 0.906 0.955 0.943 0.943 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
26. T28D9.10 snr-3 9995 7.529 0.917 0.966 0.933 0.966 0.955 0.941 0.933 0.918 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
27. B0513.2 B0513.2 3641 7.528 0.920 0.947 0.940 0.947 0.961 0.927 0.927 0.959
28. Y73B6BL.32 lsm-8 11002 7.526 0.938 0.966 0.949 0.966 0.957 0.921 0.904 0.925 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
29. R13A5.12 lpd-7 10476 7.525 0.940 0.956 0.900 0.956 0.947 0.953 0.934 0.939 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
30. C15H11.9 rrbs-1 9177 7.525 0.920 0.947 0.941 0.947 0.978 0.935 0.928 0.929 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
31. T03D8.2 mrps-12 8253 7.524 0.952 0.944 0.919 0.944 0.968 0.932 0.957 0.908 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
32. D2096.8 nap-1 59459 7.524 0.935 0.959 0.925 0.959 0.961 0.875 0.930 0.980 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
33. B0035.12 sart-3 7188 7.524 0.921 0.964 0.940 0.964 0.987 0.924 0.883 0.941 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
34. F43C1.6 mrpl-21 2778 7.523 0.894 0.965 0.903 0.965 0.944 0.947 0.951 0.954 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
35. F41G3.14 exos-8 2300 7.52 0.933 0.964 0.877 0.964 0.974 0.942 0.919 0.947 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
36. C34E10.11 mrps-26 4649 7.517 0.888 0.959 0.961 0.959 0.965 0.929 0.936 0.920 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
37. F55H2.6 clu-1 21404 7.515 0.936 0.959 0.966 0.959 0.951 0.911 0.897 0.936 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
38. Y50D7A.9 taco-1 5949 7.511 0.934 0.966 0.922 0.966 0.934 0.915 0.903 0.971 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
39. Y48A6B.5 exos-1 1552 7.509 0.944 0.949 0.895 0.949 0.982 0.929 0.943 0.918 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_499416]
40. C49H3.10 xpo-3 9101 7.506 0.928 0.964 0.947 0.964 0.939 0.971 0.905 0.888 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
41. C26B2.6 elpc-4 3600 7.505 0.905 0.962 0.900 0.962 0.933 0.944 0.963 0.936 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
42. M01E11.5 cey-3 20931 7.503 0.922 0.940 0.921 0.940 0.965 0.919 0.932 0.964 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
43. C34E10.5 prmt-5 12277 7.502 0.939 0.977 0.957 0.977 0.928 0.919 0.867 0.938 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
44. Y92H12BR.6 set-29 2455 7.502 0.915 0.964 0.903 0.964 0.981 0.909 0.896 0.970 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_490849]
45. B0511.8 mrps-30 5050 7.501 0.959 0.974 0.924 0.974 0.923 0.896 0.923 0.928 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
46. Y54E5A.6 Y54E5A.6 770 7.498 0.900 0.933 0.936 0.933 0.955 0.937 0.929 0.975
47. T07D4.4 ddx-19 7234 7.496 0.924 0.939 0.956 0.939 0.945 0.955 0.936 0.902 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
48. Y71F9B.4 snr-7 13542 7.496 0.904 0.963 0.895 0.963 0.970 0.923 0.909 0.969 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
49. C27H6.3 tofu-1 2992 7.494 0.843 0.959 0.925 0.959 0.975 0.952 0.946 0.935 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
50. Y48B6A.3 xrn-2 4881 7.493 0.936 0.925 0.904 0.925 0.962 0.951 0.933 0.957 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
51. F43G9.5 cfim-1 9169 7.49 0.894 0.933 0.918 0.933 0.957 0.951 0.946 0.958 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
52. T12E12.2 cec-6 4758 7.489 0.948 0.947 0.955 0.947 0.930 0.919 0.925 0.918 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
53. F09G2.9 attf-2 14771 7.489 0.925 0.957 0.916 0.957 0.943 0.939 0.924 0.928 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
54. Y77E11A.6 rpc-11 2203 7.488 0.912 0.940 0.922 0.940 0.970 0.948 0.908 0.948 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_500076]
55. R07E5.14 rnp-4 11659 7.487 0.871 0.941 0.917 0.941 0.968 0.929 0.961 0.959 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
56. C03D6.8 rpl-24.2 5932 7.485 0.922 0.943 0.908 0.943 0.942 0.934 0.937 0.956 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
57. Y53C12B.3 nos-3 20231 7.485 0.918 0.963 0.949 0.963 0.966 0.854 0.917 0.955 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
58. Y39E4B.2 snpc-1.2 5800 7.484 0.933 0.963 0.914 0.963 0.969 0.919 0.917 0.906 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
59. F01F1.8 cct-6 29460 7.481 0.884 0.973 0.961 0.973 0.923 0.929 0.941 0.897 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
60. Y62E10A.12 lsm-3 4322 7.481 0.889 0.940 0.908 0.940 0.958 0.936 0.963 0.947 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
61. E02H1.3 tag-124 2189 7.479 0.903 0.957 0.907 0.957 0.969 0.870 0.955 0.961 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
62. W06H3.3 ctps-1 8363 7.478 0.898 0.931 0.946 0.931 0.956 0.924 0.945 0.947 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
63. F53F4.12 F53F4.12 2683 7.478 0.917 0.928 0.915 0.928 0.953 0.964 0.915 0.958
64. E02H1.2 E02H1.2 2194 7.476 0.923 0.915 0.950 0.915 0.945 0.948 0.946 0.934 Uncharacterized GTP-binding protein E02H1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09523]
65. T24H7.1 phb-2 28775 7.475 0.925 0.960 0.891 0.960 0.919 0.951 0.946 0.923 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
66. ZK652.1 snr-5 5993 7.474 0.906 0.961 0.919 0.961 0.915 0.948 0.924 0.940 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
67. Y73B6BL.3 exos-2 2624 7.471 0.912 0.944 0.931 0.944 0.939 0.943 0.955 0.903 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
68. F23F1.1 nfyc-1 9983 7.47 0.898 0.957 0.918 0.957 0.964 0.937 0.912 0.927 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
69. B0303.15 mrpl-11 9889 7.47 0.897 0.943 0.948 0.943 0.937 0.963 0.946 0.893 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
70. F26F4.11 rpb-8 7601 7.47 0.863 0.938 0.934 0.938 0.951 0.948 0.930 0.968 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
71. C26E6.4 rpb-2 7053 7.469 0.887 0.973 0.928 0.973 0.942 0.921 0.900 0.945 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
72. F21C3.4 rde-2 6286 7.469 0.904 0.942 0.947 0.942 0.951 0.940 0.906 0.937
73. H20J04.8 mog-2 3084 7.469 0.903 0.955 0.921 0.955 0.973 0.901 0.918 0.943 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
74. F55A12.8 nath-10 4253 7.467 0.851 0.960 0.941 0.960 0.967 0.914 0.944 0.930 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
75. F58B3.5 mars-1 6729 7.467 0.938 0.941 0.956 0.941 0.963 0.935 0.927 0.866 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
76. K04C2.3 K04C2.3 23540 7.465 0.915 0.912 0.921 0.912 0.964 0.928 0.946 0.967
77. M88.7 cisd-3.1 5713 7.464 0.900 0.938 0.962 0.938 0.940 0.908 0.945 0.933 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
78. T21B10.1 mrpl-50 14595 7.463 0.919 0.970 0.943 0.970 0.907 0.932 0.969 0.853 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
79. C23G10.8 C23G10.8 4642 7.463 0.885 0.953 0.927 0.953 0.976 0.896 0.938 0.935
80. C04G2.6 dis-3 5048 7.462 0.915 0.961 0.928 0.961 0.965 0.914 0.905 0.913 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
81. C06A8.4 skr-17 2589 7.46 0.904 0.956 0.900 0.956 0.944 0.952 0.903 0.945 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
82. Y92H12BR.8 mrpl-15 6344 7.46 0.924 0.952 0.929 0.952 0.946 0.928 0.868 0.961 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
83. K12H4.4 K12H4.4 8351 7.459 0.923 0.953 0.843 0.953 0.928 0.958 0.944 0.957 Probable signal peptidase complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34525]
84. F59A2.3 cri-3 15077 7.458 0.916 0.949 0.876 0.949 0.896 0.948 0.964 0.960 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
85. T21B10.7 cct-2 13999 7.458 0.918 0.958 0.938 0.958 0.940 0.922 0.962 0.862 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
86. Y71G12B.9 lin-65 7476 7.456 0.873 0.962 0.923 0.962 0.977 0.921 0.898 0.940 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
87. C16C10.4 C16C10.4 3439 7.456 0.872 0.941 0.914 0.941 0.963 0.921 0.927 0.977 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
88. B0414.5 cpb-3 11584 7.455 0.926 0.951 0.926 0.951 0.974 0.914 0.950 0.863 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
89. C15H11.6 nxf-2 1545 7.455 0.883 0.959 0.912 0.959 0.908 0.956 0.955 0.923 Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]
90. H43I07.2 rpac-40 3342 7.455 0.905 0.950 0.893 0.950 0.922 0.958 0.923 0.954 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
91. F41H10.10 htp-1 6425 7.454 0.938 0.956 0.944 0.956 0.974 0.902 0.921 0.863 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
92. Y62E10A.11 mdt-9 5971 7.452 0.937 0.949 0.925 0.949 0.952 0.941 0.892 0.907 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
93. F56D1.3 mrps-16 2309 7.452 0.906 0.967 0.928 0.967 0.945 0.959 0.831 0.949 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
94. C26D10.1 ran-3 11111 7.45 0.865 0.958 0.956 0.958 0.958 0.920 0.893 0.942 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
95. K01G5.2 hpl-2 6781 7.45 0.863 0.944 0.940 0.944 0.943 0.937 0.904 0.975 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
96. W04D2.5 mrps-11 5757 7.449 0.940 0.952 0.961 0.952 0.898 0.920 0.919 0.907 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
97. B0205.11 mrpl-9 9162 7.448 0.922 0.963 0.941 0.963 0.929 0.894 0.911 0.925 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
98. C16A3.3 let-716 8448 7.447 0.844 0.967 0.938 0.967 0.965 0.908 0.910 0.948
99. C09G5.2 dph-2 2159 7.447 0.922 0.968 0.901 0.968 0.969 0.921 0.882 0.916 Diphthamide biosynthesis protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09454]
100. F14B4.3 rpoa-2 7549 7.447 0.872 0.961 0.928 0.961 0.955 0.929 0.900 0.941 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]

There are 1253 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA