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Results for R09B3.1

Gene ID Gene Name Reads Transcripts Annotation
R09B3.1 exo-3 4401 R09B3.1a.1, R09B3.1a.2, R09B3.1b EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]

Genes with expression patterns similar to R09B3.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R09B3.1 exo-3 4401 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
2. M01E11.5 cey-3 20931 7.891 0.978 0.988 0.990 0.988 0.989 0.987 0.979 0.992 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
3. T23G11.3 gld-1 41748 7.771 0.961 0.968 0.981 0.968 0.987 0.970 0.953 0.983 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
4. C07H6.5 cgh-1 60576 7.761 0.931 0.976 0.985 0.976 0.979 0.970 0.975 0.969 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
5. F46F11.2 cey-2 47143 7.731 0.950 0.976 0.965 0.976 0.979 0.961 0.947 0.977 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
6. B0414.5 cpb-3 11584 7.712 0.969 0.960 0.986 0.960 0.978 0.958 0.946 0.955 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
7. C01F6.8 icln-1 6586 7.7 0.970 0.982 0.970 0.982 0.962 0.922 0.950 0.962 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
8. C34D4.12 cyn-12 7363 7.696 0.949 0.961 0.970 0.961 0.960 0.983 0.951 0.961 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
9. F53A2.4 nud-1 7818 7.692 0.970 0.954 0.967 0.954 0.956 0.971 0.959 0.961 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
10. C26B2.6 elpc-4 3600 7.692 0.949 0.973 0.949 0.973 0.957 0.967 0.964 0.960 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
11. C48B4.7 C48B4.7 4006 7.692 0.975 0.952 0.936 0.952 0.957 0.975 0.962 0.983
12. C37A2.4 cye-1 4158 7.685 0.914 0.973 0.975 0.973 0.974 0.930 0.979 0.967 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
13. C06G3.2 klp-18 4885 7.682 0.963 0.978 0.962 0.978 0.968 0.940 0.947 0.946 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_501093]
14. D2023.5 mpst-1 10328 7.682 0.972 0.969 0.937 0.969 0.961 0.929 0.965 0.980 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
15. F43G9.5 cfim-1 9169 7.682 0.970 0.951 0.976 0.951 0.965 0.933 0.965 0.971 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
16. C34E10.2 gop-2 5684 7.678 0.973 0.944 0.967 0.944 0.965 0.975 0.971 0.939 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
17. Y14H12B.2 Y14H12B.2 6496 7.676 0.969 0.960 0.986 0.960 0.962 0.968 0.939 0.932
18. Y18D10A.17 car-1 87364 7.664 0.971 0.942 0.980 0.942 0.940 0.965 0.947 0.977 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
19. C18E9.3 szy-20 6819 7.663 0.982 0.958 0.981 0.958 0.966 0.944 0.930 0.944 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
20. Y116A8C.42 snr-1 17062 7.66 0.980 0.962 0.974 0.962 0.962 0.914 0.969 0.937 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
21. Y53C12B.3 nos-3 20231 7.657 0.963 0.973 0.974 0.973 0.958 0.922 0.953 0.941 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
22. C05D2.5 xnd-1 5516 7.655 0.931 0.949 0.975 0.949 0.981 0.936 0.966 0.968 X chromosome NonDisjunction factor [Source:RefSeq peptide;Acc:NP_498207]
23. B0035.12 sart-3 7188 7.651 0.969 0.962 0.977 0.962 0.952 0.964 0.927 0.938 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
24. C23G10.8 C23G10.8 4642 7.649 0.938 0.954 0.978 0.954 0.968 0.958 0.943 0.956
25. Y37D8A.11 cec-7 8801 7.647 0.953 0.962 0.973 0.962 0.953 0.956 0.960 0.928 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
26. F52B5.3 F52B5.3 2077 7.647 0.969 0.955 0.981 0.955 0.947 0.946 0.967 0.927
27. B0285.4 B0285.4 3474 7.643 0.953 0.971 0.948 0.971 0.961 0.936 0.944 0.959 Probable leucine carboxyl methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46554]
28. F59A2.1 npp-9 34375 7.641 0.966 0.940 0.978 0.940 0.965 0.943 0.965 0.944 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
29. W02B12.11 W02B12.11 8336 7.64 0.974 0.919 0.966 0.919 0.960 0.978 0.953 0.971 N-acetyllactosamine synthase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGS9]
30. W01A8.5 tofu-5 5678 7.638 0.942 0.953 0.959 0.953 0.968 0.963 0.947 0.953 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
31. C05C8.5 C05C8.5 2655 7.638 0.964 0.961 0.921 0.961 0.970 0.966 0.954 0.941
32. T28D9.10 snr-3 9995 7.633 0.985 0.977 0.925 0.977 0.951 0.958 0.956 0.904 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
33. W08E3.1 snr-2 14849 7.632 0.967 0.947 0.966 0.947 0.940 0.939 0.965 0.961 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
34. F21C3.4 rde-2 6286 7.631 0.969 0.967 0.977 0.967 0.938 0.957 0.950 0.906
35. ZK856.10 rpc-25 3282 7.63 0.965 0.968 0.934 0.968 0.942 0.984 0.963 0.906 RNA Polymerase, Class III (C) [Source:RefSeq peptide;Acc:NP_505625]
36. K07A1.12 lin-53 15817 7.621 0.947 0.956 0.977 0.956 0.958 0.932 0.970 0.925 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
37. B0205.9 B0205.9 3651 7.618 0.988 0.947 0.957 0.947 0.945 0.913 0.961 0.960
38. T28D9.2 rsp-5 6460 7.618 0.974 0.955 0.973 0.955 0.929 0.965 0.944 0.923 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
39. W06E11.4 sbds-1 6701 7.618 0.947 0.967 0.955 0.967 0.958 0.952 0.943 0.929 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
40. C48B6.3 C48B6.3 6610 7.616 0.949 0.943 0.972 0.943 0.943 0.942 0.967 0.957
41. F10G7.3 unc-85 5206 7.611 0.969 0.951 0.942 0.951 0.954 0.931 0.944 0.969 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
42. Y47D3A.26 smc-3 6256 7.61 0.910 0.953 0.982 0.953 0.960 0.966 0.958 0.928 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
43. R07E5.14 rnp-4 11659 7.609 0.976 0.942 0.967 0.942 0.959 0.914 0.962 0.947 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
44. C36A4.5 maph-1.3 15493 7.604 0.925 0.980 0.958 0.980 0.970 0.922 0.953 0.916 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
45. Y39B6A.35 tgt-2 2364 7.604 0.963 0.931 0.913 0.931 0.949 0.980 0.985 0.952 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
46. Y54E5A.6 Y54E5A.6 770 7.601 0.951 0.948 0.963 0.948 0.957 0.933 0.950 0.951
47. C06A8.4 skr-17 2589 7.596 0.973 0.953 0.955 0.953 0.982 0.917 0.912 0.951 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
48. Y41D4B.19 npp-8 12992 7.592 0.948 0.959 0.989 0.959 0.960 0.913 0.962 0.902 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
49. F41H10.10 htp-1 6425 7.591 0.940 0.954 0.942 0.954 0.977 0.953 0.948 0.923 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
50. Y37D8A.9 mrg-1 14369 7.591 0.952 0.941 0.964 0.941 0.976 0.930 0.933 0.954 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
51. K01G5.2 hpl-2 6781 7.59 0.951 0.973 0.977 0.973 0.935 0.921 0.916 0.944 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
52. F26F4.11 rpb-8 7601 7.59 0.967 0.938 0.944 0.938 0.970 0.933 0.944 0.956 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
53. F56F3.1 ifet-1 25772 7.585 0.965 0.983 0.985 0.983 0.930 0.883 0.927 0.929 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
54. Y38C9A.2 cgp-1 11756 7.585 0.950 0.953 0.985 0.953 0.945 0.934 0.923 0.942 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
55. Y113G7B.5 fog-2 2753 7.583 0.946 0.949 0.984 0.949 0.934 0.962 0.925 0.934 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
56. C02F5.4 cids-1 3125 7.579 0.937 0.969 0.968 0.969 0.945 0.957 0.892 0.942 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
57. Y23H5B.6 Y23H5B.6 5886 7.578 0.961 0.955 0.955 0.955 0.949 0.952 0.942 0.909
58. C04G2.6 dis-3 5048 7.578 0.935 0.955 0.965 0.955 0.957 0.953 0.915 0.943 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
59. Y39E4B.2 snpc-1.2 5800 7.573 0.929 0.949 0.971 0.949 0.961 0.958 0.933 0.923 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
60. T05H4.11 T05H4.11 12835 7.572 0.911 0.952 0.966 0.952 0.966 0.969 0.947 0.909
61. Y54H5A.2 Y54H5A.2 2168 7.572 0.939 0.903 0.948 0.903 0.965 0.981 0.992 0.941
62. Y71F9B.4 snr-7 13542 7.571 0.982 0.942 0.933 0.942 0.961 0.923 0.951 0.937 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
63. Y39G10AR.7 ekl-7 7072 7.57 0.960 0.959 0.965 0.959 0.892 0.932 0.976 0.927
64. F55G1.8 plk-3 12036 7.57 0.954 0.973 0.985 0.973 0.931 0.904 0.907 0.943 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
65. W03F8.4 W03F8.4 20285 7.568 0.925 0.959 0.942 0.959 0.960 0.944 0.954 0.925
66. C27H6.3 tofu-1 2992 7.567 0.926 0.934 0.931 0.934 0.976 0.947 0.961 0.958 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
67. Y71G12B.9 lin-65 7476 7.566 0.944 0.969 0.969 0.969 0.959 0.918 0.906 0.932 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
68. C48B4.11 C48B4.11 4384 7.566 0.980 0.964 0.966 0.964 0.902 0.890 0.961 0.939
69. F41G3.14 exos-8 2300 7.564 0.964 0.950 0.929 0.950 0.954 0.932 0.970 0.915 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
70. ZK381.1 him-3 4913 7.563 0.981 0.962 0.980 0.962 0.916 0.939 0.888 0.935 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
71. F23F1.1 nfyc-1 9983 7.561 0.972 0.963 0.973 0.963 0.940 0.935 0.913 0.902 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
72. Y73B6BL.2 htp-2 5257 7.561 0.978 0.960 0.969 0.960 0.970 0.899 0.904 0.921 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500981]
73. Y54E10A.11 Y54E10A.11 2415 7.561 0.960 0.926 0.956 0.926 0.952 0.969 0.951 0.921 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
74. H43I07.2 rpac-40 3342 7.56 0.948 0.929 0.924 0.929 0.948 0.957 0.942 0.983 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
75. Y66D12A.7 Y66D12A.7 1746 7.56 0.933 0.944 0.976 0.944 0.907 0.940 0.963 0.953 Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BI40]
76. C43E11.10 cdc-6 5331 7.558 0.965 0.969 0.955 0.969 0.925 0.907 0.960 0.908 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
77. C26E6.7 eri-9 8069 7.558 0.943 0.957 0.945 0.957 0.963 0.929 0.938 0.926 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
78. F53F4.12 F53F4.12 2683 7.557 0.970 0.951 0.952 0.951 0.913 0.970 0.947 0.903
79. T23B12.2 mrpl-4 3820 7.556 0.927 0.935 0.942 0.935 0.968 0.962 0.964 0.923 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_505181]
80. C49H3.10 xpo-3 9101 7.556 0.932 0.958 0.971 0.958 0.946 0.934 0.965 0.892 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
81. K01G5.1 rnf-113 4336 7.552 0.933 0.980 0.951 0.980 0.920 0.931 0.947 0.910 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
82. ZK418.8 tofu-7 2450 7.551 0.947 0.954 0.955 0.954 0.975 0.954 0.862 0.950 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_498547]
83. E02H1.3 tag-124 2189 7.551 0.914 0.953 0.952 0.953 0.942 0.948 0.936 0.953 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
84. F14B4.3 rpoa-2 7549 7.55 0.893 0.953 0.958 0.953 0.963 0.964 0.941 0.925 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
85. F14D2.13 bath-28 1965 7.55 0.917 0.946 0.943 0.946 0.960 0.949 0.940 0.949 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_871999]
86. F52F12.4 lsl-1 4055 7.548 0.933 0.929 0.967 0.929 0.959 0.910 0.953 0.968 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
87. Y17G7A.1 hmg-12 29989 7.548 0.977 0.976 0.976 0.976 0.941 0.902 0.923 0.877 HMG [Source:RefSeq peptide;Acc:NP_496544]
88. K08F4.2 gtbp-1 25222 7.546 0.972 0.937 0.958 0.937 0.929 0.939 0.964 0.910 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
89. H26D21.2 msh-2 2115 7.546 0.939 0.943 0.937 0.943 0.974 0.959 0.888 0.963 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491202]
90. F56D1.3 mrps-16 2309 7.545 0.966 0.925 0.936 0.925 0.960 0.955 0.959 0.919 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
91. R06F6.1 cdl-1 14167 7.545 0.887 0.934 0.952 0.934 0.980 0.968 0.958 0.932 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
92. C25A1.4 C25A1.4 15507 7.545 0.969 0.947 0.972 0.947 0.955 0.923 0.938 0.894
93. B0414.6 glh-3 2050 7.544 0.893 0.969 0.961 0.969 0.954 0.915 0.944 0.939 ATP-dependent RNA helicase glh-3 [Source:UniProtKB/Swiss-Prot;Acc:O01836]
94. Y40G12A.1 ubh-3 4142 7.543 0.959 0.927 0.940 0.927 0.961 0.935 0.965 0.929 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
95. K04C2.3 K04C2.3 23540 7.543 0.916 0.931 0.912 0.931 0.944 0.985 0.964 0.960
96. T24D1.5 har-2 2882 7.542 0.928 0.938 0.974 0.938 0.956 0.940 0.939 0.929
97. C41D11.5 cmt-1 2725 7.542 0.887 0.942 0.933 0.942 0.969 0.977 0.952 0.940 p31CoMeT related [Source:RefSeq peptide;Acc:NP_491373]
98. F26H9.1 prom-1 6444 7.539 0.968 0.936 0.969 0.936 0.980 0.941 0.911 0.898 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
99. R06A4.4 imb-2 10302 7.539 0.956 0.959 0.968 0.959 0.953 0.907 0.934 0.903 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
100. ZK1128.6 ttll-4 6059 7.539 0.944 0.960 0.979 0.960 0.964 0.943 0.861 0.928 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA