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Results for Y62E10A.12

Gene ID Gene Name Reads Transcripts Annotation
Y62E10A.12 lsm-3 4322 Y62E10A.12a.1, Y62E10A.12a.2, Y62E10A.12b.1, Y62E10A.12b.2 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]

Genes with expression patterns similar to Y62E10A.12

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y62E10A.12 lsm-3 4322 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
2. K07A1.12 lin-53 15817 7.748 0.960 0.966 0.944 0.966 0.985 0.983 0.978 0.966 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
3. R07E5.14 rnp-4 11659 7.747 0.978 0.972 0.957 0.972 0.950 0.980 0.986 0.952 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
4. H27M09.2 rpb-5 4744 7.735 0.970 0.967 0.952 0.967 0.973 0.977 0.974 0.955 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
5. W08E3.1 snr-2 14849 7.729 0.981 0.952 0.970 0.952 0.939 0.973 0.983 0.979 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
6. F09G2.9 attf-2 14771 7.704 0.965 0.965 0.951 0.965 0.965 0.978 0.961 0.954 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
7. Y71F9B.4 snr-7 13542 7.701 0.947 0.946 0.952 0.946 0.979 0.988 0.956 0.987 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
8. F43G9.5 cfim-1 9169 7.7 0.968 0.959 0.947 0.959 0.969 0.971 0.979 0.948 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
9. Y40B1B.8 Y40B1B.8 4877 7.698 0.937 0.967 0.959 0.967 0.959 0.980 0.957 0.972
10. F59A2.1 npp-9 34375 7.697 0.958 0.965 0.969 0.965 0.960 0.979 0.969 0.932 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
11. C34D4.12 cyn-12 7363 7.68 0.955 0.944 0.949 0.944 0.976 0.977 0.983 0.952 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
12. F01F1.8 cct-6 29460 7.679 0.966 0.956 0.955 0.956 0.953 0.982 0.971 0.940 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
13. K08F4.2 gtbp-1 25222 7.67 0.947 0.934 0.959 0.934 0.973 0.985 0.987 0.951 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
14. C34E10.2 gop-2 5684 7.667 0.975 0.937 0.956 0.937 0.965 0.984 0.969 0.944 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
15. W01A8.5 tofu-5 5678 7.662 0.935 0.961 0.948 0.961 0.973 0.971 0.981 0.932 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
16. Y37D8A.9 mrg-1 14369 7.658 0.941 0.958 0.926 0.958 0.963 0.981 0.973 0.958 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
17. Y40G12A.1 ubh-3 4142 7.658 0.948 0.938 0.972 0.938 0.942 0.984 0.953 0.983 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
18. W06E11.4 sbds-1 6701 7.657 0.949 0.949 0.967 0.949 0.959 0.985 0.942 0.957 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
19. Y14H12B.2 Y14H12B.2 6496 7.654 0.946 0.920 0.962 0.920 0.972 0.982 0.979 0.973
20. F21C3.4 rde-2 6286 7.654 0.926 0.941 0.967 0.941 0.974 0.988 0.941 0.976
21. ZK1128.6 ttll-4 6059 7.653 0.942 0.962 0.947 0.962 0.975 0.978 0.930 0.957 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
22. F53A2.4 nud-1 7818 7.646 0.966 0.928 0.964 0.928 0.974 0.988 0.986 0.912 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
23. F32A5.7 lsm-4 3785 7.641 0.978 0.960 0.956 0.960 0.936 0.965 0.948 0.938 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
24. T10G3.6 gut-2 3374 7.641 0.971 0.946 0.964 0.946 0.955 0.963 0.944 0.952
25. Y53C12B.2 Y53C12B.2 6115 7.639 0.922 0.967 0.945 0.967 0.979 0.956 0.985 0.918 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
26. T21B10.7 cct-2 13999 7.635 0.955 0.929 0.959 0.929 0.968 0.979 0.983 0.933 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
27. Y53C12B.3 nos-3 20231 7.634 0.946 0.952 0.973 0.952 0.942 0.953 0.959 0.957 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
28. Y116A8C.42 snr-1 17062 7.63 0.951 0.944 0.969 0.944 0.949 0.966 0.976 0.931 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
29. Y54E5A.6 Y54E5A.6 770 7.629 0.939 0.921 0.971 0.921 0.957 0.981 0.959 0.980
30. T28D9.10 snr-3 9995 7.629 0.963 0.925 0.961 0.925 0.957 0.989 0.983 0.926 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
31. T05H4.11 T05H4.11 12835 7.627 0.898 0.954 0.956 0.954 0.977 0.978 0.974 0.936
32. F26F4.11 rpb-8 7601 7.626 0.955 0.953 0.942 0.953 0.937 0.977 0.946 0.963 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
33. ZK863.6 dpy-30 16177 7.624 0.963 0.964 0.962 0.964 0.942 0.936 0.962 0.931 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
34. C06A1.5 rpb-6 7515 7.623 0.965 0.922 0.961 0.922 0.961 0.970 0.943 0.979 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
35. C07G2.3 cct-5 44703 7.622 0.966 0.943 0.958 0.943 0.955 0.956 0.968 0.933 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
36. W06H3.3 ctps-1 8363 7.617 0.951 0.931 0.958 0.931 0.939 0.973 0.970 0.964 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
37. T28D9.2 rsp-5 6460 7.616 0.958 0.952 0.964 0.952 0.975 0.966 0.932 0.917 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
38. F26B1.3 ima-2 18826 7.61 0.940 0.962 0.934 0.962 0.959 0.957 0.965 0.931 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
39. E02H1.3 tag-124 2189 7.609 0.936 0.951 0.941 0.951 0.971 0.968 0.971 0.920 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
40. D2023.5 mpst-1 10328 7.608 0.935 0.930 0.959 0.930 0.954 0.966 0.979 0.955 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
41. T01B7.4 cyn-11 2088 7.606 0.972 0.938 0.907 0.938 0.970 0.981 0.947 0.953 Peptidyl-prolyl cis-trans isomerase 11 [Source:UniProtKB/Swiss-Prot;Acc:P52018]
42. F53F4.12 F53F4.12 2683 7.606 0.936 0.919 0.962 0.919 0.977 0.986 0.945 0.962
43. C26D10.1 ran-3 11111 7.605 0.959 0.950 0.963 0.950 0.910 0.978 0.955 0.940 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
44. C05C8.5 C05C8.5 2655 7.605 0.972 0.930 0.957 0.930 0.965 0.979 0.903 0.969
45. K11H3.6 mrpl-36 7328 7.603 0.958 0.946 0.924 0.946 0.971 0.970 0.956 0.932 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
46. R06A4.4 imb-2 10302 7.602 0.959 0.936 0.940 0.936 0.952 0.962 0.952 0.965 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
47. Y71G12B.9 lin-65 7476 7.599 0.921 0.951 0.971 0.951 0.968 0.960 0.949 0.928 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
48. Y55F3AM.12 dcap-1 8679 7.597 0.962 0.942 0.951 0.942 0.976 0.964 0.976 0.884 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
49. C41C4.6 ulp-4 13338 7.597 0.908 0.961 0.969 0.961 0.965 0.965 0.971 0.897 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
50. C01F6.8 icln-1 6586 7.596 0.958 0.933 0.959 0.933 0.941 0.976 0.977 0.919 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
51. H20J04.8 mog-2 3084 7.596 0.964 0.961 0.931 0.961 0.923 0.946 0.954 0.956 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
52. Y23H5B.6 Y23H5B.6 5886 7.595 0.946 0.932 0.959 0.932 0.942 0.969 0.955 0.960
53. T21B10.1 mrpl-50 14595 7.595 0.929 0.947 0.977 0.947 0.941 0.981 0.974 0.899 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
54. K01G5.2 hpl-2 6781 7.594 0.952 0.931 0.972 0.931 0.960 0.961 0.942 0.945 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
55. Y39G10AR.20 tbca-1 4155 7.593 0.964 0.973 0.944 0.973 0.943 0.886 0.959 0.951 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
56. Y55F3AR.3 cct-8 17979 7.591 0.938 0.923 0.960 0.923 0.954 0.985 0.971 0.937 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
57. Y56A3A.19 Y56A3A.19 9680 7.59 0.908 0.912 0.965 0.912 0.971 0.974 0.971 0.977 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
58. T05C12.7 cct-1 41264 7.589 0.978 0.947 0.971 0.947 0.926 0.921 0.974 0.925 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
59. F59E12.11 sam-4 8179 7.588 0.963 0.950 0.970 0.950 0.942 0.954 0.943 0.916
60. C28A5.1 C28A5.1 1076 7.588 0.941 0.908 0.958 0.908 0.975 0.981 0.958 0.959
61. C26E6.7 eri-9 8069 7.587 0.951 0.962 0.931 0.962 0.971 0.959 0.961 0.890 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
62. C08F8.1 pfd-1 10199 7.587 0.967 0.922 0.942 0.922 0.975 0.962 0.947 0.950 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
63. Y39E4B.2 snpc-1.2 5800 7.586 0.952 0.946 0.950 0.946 0.965 0.956 0.957 0.914 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
64. C18E9.3 szy-20 6819 7.583 0.947 0.948 0.958 0.948 0.965 0.971 0.966 0.880 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
65. K04G2.2 aho-3 15189 7.583 0.928 0.949 0.934 0.949 0.964 0.949 0.986 0.924
66. C48B4.7 C48B4.7 4006 7.582 0.956 0.929 0.942 0.929 0.963 0.943 0.974 0.946
67. K04C2.3 K04C2.3 23540 7.582 0.886 0.931 0.955 0.931 0.967 0.975 0.974 0.963
68. Y47D3A.26 smc-3 6256 7.582 0.919 0.943 0.970 0.943 0.970 0.953 0.958 0.926 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
69. B0024.13 B0024.13 4311 7.58 0.945 0.953 0.945 0.953 0.957 0.971 0.976 0.880 Polyprenol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17428]
70. Y69A2AR.30 mdf-2 6403 7.58 0.931 0.959 0.927 0.959 0.955 0.972 0.971 0.906 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
71. B0035.12 sart-3 7188 7.579 0.954 0.931 0.980 0.931 0.980 0.970 0.913 0.920 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
72. Y18D10A.16 Y18D10A.16 2881 7.574 0.962 0.948 0.954 0.948 0.964 0.970 0.934 0.894
73. C08B6.9 aos-1 3892 7.574 0.980 0.965 0.949 0.965 0.885 0.964 0.940 0.926 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
74. T23G7.1 dpl-1 6620 7.574 0.974 0.953 0.956 0.953 0.956 0.973 0.945 0.864 Transcription factor dpl-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22703]
75. F41G3.14 exos-8 2300 7.572 0.933 0.940 0.915 0.940 0.974 0.972 0.938 0.960 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
76. ZK742.1 xpo-1 20741 7.572 0.924 0.963 0.973 0.963 0.945 0.942 0.922 0.940 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
77. Y62E10A.11 mdt-9 5971 7.571 0.947 0.947 0.962 0.947 0.923 0.982 0.928 0.935 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
78. F58E10.3 ddx-17 15107 7.569 0.954 0.943 0.971 0.943 0.924 0.969 0.942 0.923 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
79. M01E11.5 cey-3 20931 7.569 0.957 0.917 0.969 0.917 0.956 0.963 0.972 0.918 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
80. K01G5.4 ran-1 32379 7.568 0.974 0.951 0.945 0.951 0.918 0.954 0.928 0.947 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
81. R06F6.1 cdl-1 14167 7.568 0.877 0.965 0.910 0.965 0.961 0.971 0.974 0.945 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
82. B0513.2 B0513.2 3641 7.568 0.903 0.911 0.952 0.911 0.981 0.979 0.972 0.959
83. Y73B6BL.3 exos-2 2624 7.566 0.956 0.934 0.930 0.934 0.985 0.930 0.974 0.923 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
84. C16C10.4 C16C10.4 3439 7.566 0.935 0.942 0.943 0.942 0.967 0.942 0.941 0.954 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
85. Y39B6A.35 tgt-2 2364 7.565 0.965 0.909 0.929 0.909 0.971 0.964 0.967 0.951 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
86. R09B3.5 mag-1 7496 7.565 0.957 0.939 0.958 0.939 0.948 0.953 0.924 0.947 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
87. C49H3.10 xpo-3 9101 7.564 0.938 0.920 0.958 0.920 0.969 0.975 0.957 0.927 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
88. W02B12.11 W02B12.11 8336 7.564 0.939 0.927 0.938 0.927 0.968 0.974 0.956 0.935 N-acetyllactosamine synthase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGS9]
89. T01E8.6 mrps-14 9328 7.563 0.958 0.948 0.948 0.948 0.915 0.963 0.929 0.954 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
90. C26B2.6 elpc-4 3600 7.562 0.925 0.937 0.945 0.937 0.953 0.965 0.968 0.932 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
91. C17H12.13 anat-1 12995 7.561 0.975 0.957 0.955 0.957 0.955 0.951 0.960 0.851 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
92. M18.5 ddb-1 3823 7.56 0.908 0.948 0.938 0.948 0.941 0.983 0.951 0.943 DNA damage-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21554]
93. CC4.3 smu-1 4169 7.558 0.957 0.954 0.931 0.954 0.946 0.962 0.951 0.903 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
94. F14B4.3 rpoa-2 7549 7.557 0.877 0.932 0.947 0.932 0.975 0.979 0.955 0.960 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
95. T14G10.6 tsp-12 10308 7.556 0.922 0.950 0.928 0.950 0.945 0.970 0.964 0.927 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
96. Y73B6BL.32 lsm-8 11002 7.556 0.951 0.931 0.972 0.931 0.964 0.930 0.940 0.937 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
97. Y73B6BL.33 hrpf-2 4443 7.555 0.951 0.960 0.962 0.960 0.950 0.923 0.954 0.895 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
98. F52F12.4 lsl-1 4055 7.555 0.919 0.944 0.949 0.944 0.978 0.947 0.947 0.927 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
99. F28B3.8 imb-1 7515 7.554 0.938 0.956 0.950 0.956 0.950 0.905 0.932 0.967 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
100. H43I07.2 rpac-40 3342 7.554 0.934 0.933 0.951 0.933 0.938 0.969 0.971 0.925 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA