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Results for ZK856.9

Gene ID Gene Name Reads Transcripts Annotation
ZK856.9 zhit-3 2552 ZK856.9 Zinc finger, HIT-type [Source:RefSeq peptide;Acc:NP_505627]

Genes with expression patterns similar to ZK856.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK856.9 zhit-3 2552 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Zinc finger, HIT-type [Source:RefSeq peptide;Acc:NP_505627]
2. Y37D8A.11 cec-7 8801 7.58 0.939 0.971 0.941 0.971 0.962 0.967 0.892 0.937 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
3. F59A2.1 npp-9 34375 7.567 0.932 0.961 0.936 0.961 0.952 0.978 0.913 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
4. Y23H5B.6 Y23H5B.6 5886 7.559 0.933 0.971 0.939 0.971 0.963 0.957 0.881 0.944
5. F21C3.4 rde-2 6286 7.557 0.942 0.967 0.959 0.967 0.932 0.975 0.910 0.905
6. F56D1.3 mrps-16 2309 7.548 0.951 0.947 0.931 0.947 0.936 0.983 0.965 0.888 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
7. K01G5.4 ran-1 32379 7.543 0.940 0.967 0.938 0.967 0.943 0.927 0.909 0.952 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
8. F58E10.3 ddx-17 15107 7.534 0.914 0.975 0.935 0.975 0.953 0.953 0.884 0.945 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
9. Y116A8C.42 snr-1 17062 7.534 0.958 0.968 0.941 0.968 0.930 0.948 0.903 0.918 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
10. C48B4.11 C48B4.11 4384 7.533 0.941 0.975 0.938 0.975 0.957 0.934 0.851 0.962
11. Y14H12B.2 Y14H12B.2 6496 7.531 0.917 0.963 0.936 0.963 0.950 0.985 0.884 0.933
12. C05C8.5 C05C8.5 2655 7.522 0.962 0.944 0.921 0.944 0.944 0.968 0.940 0.899
13. K08F4.2 gtbp-1 25222 7.517 0.949 0.963 0.923 0.963 0.935 0.956 0.881 0.947 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
14. K07A1.12 lin-53 15817 7.515 0.910 0.977 0.926 0.977 0.941 0.970 0.879 0.935 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
15. C27H5.3 fust-1 6978 7.514 0.940 0.967 0.919 0.967 0.956 0.939 0.895 0.931 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
16. F52F12.4 lsl-1 4055 7.514 0.933 0.964 0.931 0.964 0.950 0.947 0.914 0.911 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
17. T28D9.10 snr-3 9995 7.512 0.948 0.957 0.920 0.957 0.917 0.971 0.899 0.943 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
18. H27M09.2 rpb-5 4744 7.508 0.937 0.963 0.911 0.963 0.970 0.962 0.873 0.929 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
19. K01G5.8 K01G5.8 4694 7.505 0.927 0.939 0.941 0.939 0.958 0.973 0.888 0.940
20. F53F4.12 F53F4.12 2683 7.503 0.956 0.953 0.906 0.953 0.955 0.988 0.856 0.936
21. T28D9.2 rsp-5 6460 7.501 0.925 0.969 0.920 0.969 0.940 0.968 0.867 0.943 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
22. F35G12.12 F35G12.12 5761 7.5 0.934 0.956 0.903 0.956 0.950 0.918 0.929 0.954
23. C27H6.2 ruvb-1 6291 7.5 0.959 0.951 0.942 0.951 0.916 0.930 0.866 0.985 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
24. Y53C12B.2 Y53C12B.2 6115 7.495 0.925 0.968 0.919 0.968 0.943 0.974 0.842 0.956 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
25. ZK652.1 snr-5 5993 7.492 0.932 0.961 0.913 0.961 0.945 0.954 0.853 0.973 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
26. C06A1.5 rpb-6 7515 7.49 0.938 0.963 0.937 0.963 0.919 0.987 0.879 0.904 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
27. F09G2.9 attf-2 14771 7.484 0.938 0.978 0.937 0.978 0.923 0.959 0.838 0.933 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
28. F23F1.1 nfyc-1 9983 7.482 0.928 0.975 0.944 0.975 0.932 0.949 0.827 0.952 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
29. B0024.13 B0024.13 4311 7.481 0.939 0.965 0.919 0.965 0.963 0.972 0.892 0.866 Polyprenol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17428]
30. F32H2.1 snpc-4 7581 7.478 0.952 0.971 0.926 0.971 0.956 0.949 0.848 0.905 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
31. Y17G7A.1 hmg-12 29989 7.476 0.944 0.972 0.948 0.972 0.952 0.947 0.839 0.902 HMG [Source:RefSeq peptide;Acc:NP_496544]
32. Y71G12B.9 lin-65 7476 7.47 0.930 0.974 0.940 0.974 0.944 0.947 0.836 0.925 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
33. Y46G5A.4 snrp-200 13827 7.469 0.925 0.976 0.936 0.976 0.958 0.920 0.819 0.959 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
34. D2023.5 mpst-1 10328 7.469 0.947 0.961 0.918 0.961 0.893 0.974 0.906 0.909 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
35. Y53C12B.3 nos-3 20231 7.468 0.968 0.966 0.923 0.966 0.926 0.903 0.877 0.939 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
36. C25A1.10 dao-5 18351 7.467 0.896 0.929 0.928 0.929 0.961 0.957 0.919 0.948 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
37. F41G3.14 exos-8 2300 7.465 0.927 0.953 0.929 0.953 0.949 0.965 0.928 0.861 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
38. T05H4.11 T05H4.11 12835 7.461 0.895 0.960 0.962 0.960 0.921 0.952 0.868 0.943
39. C44E4.5 C44E4.5 919 7.459 0.890 0.929 0.916 0.929 0.958 0.965 0.905 0.967
40. C01F6.8 icln-1 6586 7.459 0.943 0.959 0.925 0.959 0.921 0.952 0.897 0.903 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
41. K04C2.3 K04C2.3 23540 7.459 0.938 0.946 0.890 0.946 0.962 0.961 0.886 0.930
42. ZK1128.6 ttll-4 6059 7.459 0.918 0.978 0.926 0.978 0.938 0.976 0.823 0.922 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
43. C26E6.4 rpb-2 7053 7.458 0.932 0.976 0.924 0.976 0.958 0.950 0.795 0.947 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
44. R07E5.14 rnp-4 11659 7.457 0.927 0.965 0.916 0.965 0.903 0.947 0.887 0.947 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
45. Y54H5A.2 Y54H5A.2 2168 7.456 0.936 0.903 0.931 0.903 0.943 0.973 0.932 0.935
46. F32A5.7 lsm-4 3785 7.456 0.918 0.969 0.932 0.969 0.929 0.969 0.838 0.932 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
47. R13A5.12 lpd-7 10476 7.454 0.918 0.940 0.916 0.940 0.961 0.982 0.871 0.926 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
48. Y54E5A.4 npp-4 6288 7.451 0.941 0.969 0.919 0.969 0.958 0.909 0.838 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
49. T02G5.9 kars-1 9763 7.451 0.931 0.963 0.902 0.963 0.940 0.939 0.861 0.952 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
50. ZK1010.3 frg-1 3533 7.449 0.904 0.976 0.940 0.976 0.916 0.906 0.895 0.936 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
51. ZK856.10 rpc-25 3282 7.448 0.921 0.947 0.927 0.947 0.931 0.954 0.924 0.897 RNA Polymerase, Class III (C) [Source:RefSeq peptide;Acc:NP_505625]
52. B0035.12 sart-3 7188 7.448 0.947 0.970 0.951 0.970 0.948 0.939 0.902 0.821 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
53. Y39G10AR.14 mcm-4 4312 7.446 0.883 0.956 0.937 0.956 0.958 0.954 0.873 0.929 yeast MCM (licensing factor) related [Source:RefSeq peptide;Acc:NP_001293322]
54. C30G12.7 puf-8 5785 7.444 0.888 0.962 0.930 0.962 0.967 0.953 0.880 0.902 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
55. C47B2.9 C47B2.9 4096 7.439 0.942 0.935 0.910 0.935 0.921 0.954 0.911 0.931
56. Y57A10A.28 Y57A10A.28 4310 7.439 0.933 0.915 0.890 0.915 0.980 0.972 0.905 0.929
57. C07E3.2 pro-2 4193 7.439 0.888 0.931 0.933 0.931 0.967 0.957 0.905 0.927 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
58. Y71F9B.4 snr-7 13542 7.439 0.955 0.962 0.886 0.962 0.916 0.959 0.880 0.919 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
59. Y40B1B.8 Y40B1B.8 4877 7.439 0.931 0.957 0.941 0.957 0.960 0.954 0.834 0.905
60. T06A10.4 lsy-13 7631 7.436 0.951 0.958 0.923 0.958 0.898 0.945 0.868 0.935
61. K01G5.2 hpl-2 6781 7.434 0.910 0.951 0.941 0.951 0.917 0.943 0.887 0.934 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
62. T24H7.1 phb-2 28775 7.432 0.935 0.957 0.851 0.957 0.956 0.958 0.865 0.953 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
63. F55H2.6 clu-1 21404 7.432 0.934 0.930 0.918 0.930 0.946 0.949 0.859 0.966 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
64. C48B6.3 C48B6.3 6610 7.431 0.924 0.933 0.934 0.933 0.946 0.961 0.943 0.857
65. R12C12.2 ran-5 14517 7.429 0.943 0.968 0.949 0.968 0.917 0.903 0.874 0.907 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
66. Y62E10A.12 lsm-3 4322 7.428 0.936 0.969 0.929 0.969 0.923 0.970 0.843 0.889 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
67. C34E10.5 prmt-5 12277 7.426 0.949 0.970 0.949 0.970 0.914 0.934 0.803 0.937 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
68. C14A4.14 mrps-22 7966 7.425 0.929 0.968 0.909 0.968 0.906 0.966 0.854 0.925 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
69. C34E10.2 gop-2 5684 7.422 0.948 0.963 0.931 0.963 0.928 0.971 0.861 0.857 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
70. C48E7.2 let-611 2191 7.421 0.909 0.947 0.889 0.947 0.944 0.981 0.880 0.924
71. T23H2.1 npp-12 12425 7.42 0.912 0.960 0.932 0.960 0.945 0.958 0.854 0.899 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
72. Y39G10AR.7 ekl-7 7072 7.419 0.918 0.940 0.909 0.940 0.930 0.957 0.872 0.953
73. W02B12.3 rsp-1 9235 7.418 0.956 0.965 0.941 0.965 0.947 0.956 0.735 0.953 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
74. F28H1.3 aars-2 13537 7.417 0.928 0.969 0.904 0.969 0.936 0.934 0.838 0.939 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
75. K02F3.11 rnp-5 6205 7.417 0.893 0.962 0.953 0.962 0.880 0.952 0.873 0.942 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
76. ZK863.6 dpy-30 16177 7.416 0.905 0.983 0.943 0.983 0.901 0.885 0.893 0.923 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
77. T23G11.3 gld-1 41748 7.414 0.927 0.960 0.943 0.960 0.886 0.963 0.894 0.881 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
78. C49H3.10 xpo-3 9101 7.413 0.912 0.952 0.939 0.952 0.913 0.980 0.886 0.879 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
79. W01G7.3 rpb-11 7826 7.413 0.920 0.960 0.947 0.960 0.893 0.927 0.846 0.960 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
80. Y113G7B.17 prmt-1 43709 7.412 0.941 0.931 0.935 0.931 0.954 0.902 0.879 0.939 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
81. ZK742.1 xpo-1 20741 7.412 0.893 0.965 0.923 0.965 0.943 0.940 0.852 0.931 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
82. B0464.7 baf-1 10161 7.411 0.953 0.955 0.945 0.955 0.925 0.911 0.839 0.928 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
83. Y37D8A.9 mrg-1 14369 7.41 0.903 0.965 0.893 0.965 0.921 0.964 0.858 0.941 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
84. C26D10.2 hel-1 28697 7.409 0.942 0.965 0.931 0.965 0.934 0.906 0.798 0.968 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
85. Y73B6BL.32 lsm-8 11002 7.407 0.922 0.963 0.948 0.963 0.939 0.914 0.883 0.875 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
86. C05D11.10 mrps-17 4613 7.406 0.915 0.944 0.920 0.944 0.928 0.975 0.843 0.937 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
87. F01F1.8 cct-6 29460 7.406 0.946 0.976 0.898 0.976 0.921 0.953 0.861 0.875 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
88. F18A1.8 pid-1 3751 7.405 0.937 0.945 0.947 0.945 0.951 0.956 0.864 0.860 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
89. F53A2.4 nud-1 7818 7.405 0.955 0.950 0.947 0.950 0.925 0.979 0.873 0.826 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
90. F56B3.8 mrpl-2 3195 7.403 0.952 0.945 0.892 0.945 0.922 0.946 0.896 0.905 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
91. F58D5.1 hrp-2 17211 7.401 0.958 0.957 0.903 0.957 0.903 0.907 0.853 0.963 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
92. K07C5.6 K07C5.6 7375 7.401 0.862 0.960 0.912 0.960 0.964 0.946 0.856 0.941 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
93. F22D6.3 nars-1 18624 7.4 0.936 0.966 0.961 0.966 0.924 0.938 0.763 0.946 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
94. T21C9.12 scpl-4 14723 7.399 0.968 0.961 0.907 0.961 0.925 0.937 0.792 0.948 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
95. F42A6.7 hrp-1 28201 7.398 0.947 0.962 0.933 0.962 0.904 0.898 0.841 0.951 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
96. T16G1.11 eif-3.K 14014 7.398 0.955 0.957 0.898 0.957 0.951 0.915 0.819 0.946 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
97. B0414.3 hil-5 10816 7.398 0.905 0.937 0.945 0.937 0.961 0.933 0.864 0.916 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
98. C15H11.9 rrbs-1 9177 7.397 0.933 0.928 0.907 0.928 0.937 0.976 0.859 0.929 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
99. Y54E5A.6 Y54E5A.6 770 7.396 0.965 0.928 0.918 0.928 0.947 0.957 0.841 0.912
100. Y106G6H.15 ska-1 2362 7.396 0.863 0.970 0.903 0.970 0.900 0.938 0.916 0.936 Spindle and kinetochore-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWS0]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA