C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for ZK632.3

Gene ID Gene Name Reads Transcripts Annotation
ZK632.3 riok-3 1656 ZK632.3.1, ZK632.3.2 Serine/threonine-protein kinase RIO3 [Source:UniProtKB/Swiss-Prot;Acc:P34649]

Genes with expression patterns similar to ZK632.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK632.3 riok-3 1656 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Serine/threonine-protein kinase RIO3 [Source:UniProtKB/Swiss-Prot;Acc:P34649]
2. F32A5.7 lsm-4 3785 7.333 0.885 0.877 0.963 0.877 0.958 0.949 0.878 0.946 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
3. F56D2.6 ddx-15 12282 7.318 0.860 0.900 0.940 0.900 0.959 0.906 0.912 0.941 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
4. K02F2.3 teg-4 3873 7.305 0.889 0.897 0.959 0.897 0.956 0.881 0.921 0.905 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
5. T08B2.9 fars-1 12650 7.304 0.875 0.903 0.933 0.903 0.955 0.943 0.908 0.884 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
6. F28H1.3 aars-2 13537 7.299 0.876 0.864 0.957 0.864 0.965 0.954 0.901 0.918 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
7. Y71G12B.9 lin-65 7476 7.291 0.895 0.882 0.960 0.882 0.945 0.894 0.888 0.945 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
8. C30C11.1 mrpl-32 5238 7.29 0.873 0.917 0.917 0.917 0.961 0.908 0.886 0.911 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
9. F32H2.1 snpc-4 7581 7.289 0.910 0.881 0.938 0.881 0.953 0.912 0.884 0.930 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
10. R07E5.11 R07E5.11 1170 7.286 0.859 0.872 0.952 0.872 0.961 0.970 0.904 0.896
11. Y62E10A.11 mdt-9 5971 7.285 0.889 0.896 0.917 0.896 0.973 0.919 0.872 0.923 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
12. F38A5.1 odr-8 5283 7.284 0.910 0.905 0.934 0.905 0.976 0.937 0.870 0.847 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
13. K11D12.2 pqn-51 15951 7.283 0.888 0.899 0.958 0.899 0.963 0.941 0.857 0.878 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
14. ZK1010.3 frg-1 3533 7.282 0.885 0.881 0.959 0.881 0.976 0.915 0.894 0.891 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
15. Y53C10A.12 hsf-1 7899 7.273 0.842 0.907 0.947 0.907 0.970 0.909 0.878 0.913 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
16. T04A8.10 sel-13 3109 7.272 0.925 0.881 0.937 0.881 0.966 0.893 0.897 0.892 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
17. K08F4.2 gtbp-1 25222 7.272 0.849 0.890 0.952 0.890 0.952 0.928 0.865 0.946 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
18. Y54E5A.4 npp-4 6288 7.271 0.868 0.902 0.964 0.902 0.955 0.893 0.863 0.924 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
19. F13G3.4 dylt-1 21345 7.271 0.901 0.872 0.949 0.872 0.966 0.950 0.875 0.886 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
20. W03B1.4 sars-2 2356 7.27 0.864 0.888 0.914 0.888 0.966 0.949 0.917 0.884 Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
21. Y37D8A.9 mrg-1 14369 7.269 0.899 0.879 0.941 0.879 0.960 0.911 0.872 0.928 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
22. ZK742.1 xpo-1 20741 7.267 0.877 0.880 0.946 0.880 0.967 0.912 0.874 0.931 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
23. B0511.7 B0511.7 1070 7.266 0.869 0.884 0.918 0.884 0.958 0.907 0.919 0.927
24. T05C12.7 cct-1 41264 7.264 0.830 0.878 0.955 0.878 0.950 0.953 0.910 0.910 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
25. T18H9.6 mdt-27 5418 7.263 0.831 0.902 0.945 0.902 0.960 0.899 0.931 0.893 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]
26. T23H2.1 npp-12 12425 7.263 0.896 0.886 0.939 0.886 0.965 0.915 0.885 0.891 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
27. F53F4.3 tbcb-1 6442 7.26 0.877 0.894 0.952 0.894 0.969 0.903 0.859 0.912 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
28. R11A8.4 sir-2.1 1895 7.257 0.889 0.863 0.938 0.863 0.920 0.968 0.904 0.912 NAD-dependent protein deacetylase sir-2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q21921]
29. T05H4.14 gad-1 7979 7.254 0.891 0.897 0.950 0.897 0.978 0.878 0.865 0.898 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
30. B0261.4 mrpl-47 8210 7.254 0.830 0.853 0.941 0.853 0.974 0.940 0.921 0.942 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
31. R06C1.2 fdps-1 4504 7.254 0.872 0.921 0.923 0.921 0.974 0.917 0.829 0.897 Farnesyl DiPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_493027]
32. R06A4.4 imb-2 10302 7.254 0.867 0.867 0.945 0.867 0.947 0.914 0.893 0.954 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
33. F39B2.3 F39B2.3 856 7.253 0.902 0.880 0.931 0.880 0.955 0.938 0.848 0.919
34. F23F1.1 nfyc-1 9983 7.25 0.910 0.879 0.949 0.879 0.950 0.895 0.906 0.882 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
35. C55A6.2 ttll-5 5158 7.249 0.847 0.911 0.928 0.911 0.967 0.917 0.873 0.895 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
36. B0464.7 baf-1 10161 7.249 0.861 0.859 0.906 0.859 0.962 0.964 0.905 0.933 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
37. B0511.8 mrps-30 5050 7.246 0.818 0.901 0.920 0.901 0.975 0.948 0.900 0.883 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
38. F29C4.6 tut-1 5637 7.246 0.826 0.904 0.910 0.904 0.969 0.901 0.930 0.902 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
39. Y43F4B.4 npp-18 4780 7.246 0.877 0.897 0.940 0.897 0.962 0.930 0.888 0.855 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
40. Y37E3.15 npp-13 7250 7.245 0.907 0.864 0.922 0.864 0.974 0.907 0.893 0.914 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
41. Y38A8.3 ulp-2 7403 7.244 0.898 0.907 0.949 0.907 0.967 0.884 0.887 0.845 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
42. T09E8.2 him-17 4153 7.242 0.839 0.915 0.948 0.915 0.953 0.878 0.889 0.905 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
43. T22C1.3 T22C1.3 2305 7.241 0.873 0.908 0.939 0.908 0.959 0.890 0.876 0.888
44. R07E5.14 rnp-4 11659 7.24 0.876 0.867 0.955 0.867 0.977 0.946 0.835 0.917 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
45. T19C3.8 fem-2 9225 7.239 0.891 0.907 0.950 0.907 0.970 0.930 0.824 0.860 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
46. B0285.1 cdk-12 5900 7.237 0.856 0.862 0.951 0.862 0.954 0.953 0.880 0.919 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
47. C17G10.4 cdc-14 6262 7.237 0.906 0.907 0.929 0.907 0.952 0.894 0.865 0.877 Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
48. K01G5.4 ran-1 32379 7.237 0.894 0.856 0.953 0.856 0.956 0.926 0.885 0.911 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
49. Y54E5B.4 ubc-16 8386 7.237 0.869 0.909 0.936 0.909 0.963 0.937 0.900 0.814 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
50. C06A1.5 rpb-6 7515 7.236 0.884 0.870 0.924 0.870 0.965 0.901 0.892 0.930 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
51. F58E10.3 ddx-17 15107 7.235 0.890 0.883 0.951 0.883 0.941 0.913 0.857 0.917 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
52. R05D11.3 ran-4 15494 7.233 0.869 0.904 0.952 0.904 0.929 0.929 0.883 0.863 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
53. Y53C12B.3 nos-3 20231 7.233 0.874 0.883 0.941 0.883 0.959 0.884 0.874 0.935 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
54. R12C12.2 ran-5 14517 7.233 0.872 0.882 0.946 0.882 0.980 0.900 0.877 0.894 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
55. T03F6.5 lis-1 8818 7.229 0.830 0.884 0.950 0.884 0.966 0.954 0.858 0.903 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
56. C02B10.5 C02B10.5 9171 7.229 0.880 0.868 0.955 0.868 0.957 0.924 0.886 0.891
57. H20J04.5 pfd-2 8082 7.229 0.843 0.876 0.888 0.876 0.961 0.942 0.918 0.925 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
58. W02D3.11 hrpf-1 4125 7.227 0.885 0.883 0.930 0.883 0.972 0.913 0.865 0.896 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_740877]
59. F57B10.11 bag-1 3395 7.227 0.878 0.893 0.952 0.893 0.935 0.928 0.898 0.850 BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:O44739]
60. F59G1.3 vps-35 9577 7.226 0.895 0.883 0.958 0.883 0.973 0.930 0.874 0.830 Vacuolar protein sorting-associated protein 35 [Source:RefSeq peptide;Acc:NP_495180]
61. ZK1058.4 ccdc-47 8879 7.225 0.848 0.877 0.941 0.877 0.951 0.932 0.867 0.932 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
62. W04D2.5 mrps-11 5757 7.224 0.862 0.885 0.930 0.885 0.976 0.934 0.891 0.861 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
63. F54B3.3 atad-3 9583 7.224 0.898 0.893 0.835 0.893 0.974 0.890 0.912 0.929 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
64. C34E10.5 prmt-5 12277 7.223 0.885 0.875 0.945 0.875 0.965 0.903 0.890 0.885 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
65. ZK1251.9 dcaf-1 10926 7.222 0.874 0.888 0.934 0.888 0.959 0.926 0.869 0.884 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
66. T21B10.1 mrpl-50 14595 7.221 0.875 0.865 0.932 0.865 0.965 0.933 0.888 0.898 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
67. F42A6.7 hrp-1 28201 7.221 0.874 0.850 0.954 0.850 0.971 0.904 0.906 0.912 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
68. C15H11.4 dhs-22 21674 7.22 0.878 0.874 0.959 0.874 0.941 0.952 0.860 0.882 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
69. F59A2.1 npp-9 34375 7.22 0.895 0.880 0.956 0.880 0.948 0.902 0.860 0.899 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
70. T19B4.2 npp-7 13073 7.218 0.874 0.854 0.969 0.854 0.956 0.884 0.928 0.899 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
71. K03H1.2 mog-1 4057 7.217 0.911 0.891 0.952 0.891 0.906 0.902 0.878 0.886 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
72. Y41D4B.13 ced-2 10100 7.217 0.877 0.873 0.960 0.873 0.964 0.931 0.854 0.885 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
73. M01B12.5 riok-1 6698 7.217 0.855 0.849 0.944 0.849 0.955 0.933 0.910 0.922 Serine/threonine-protein kinase RIO1 [Source:UniProtKB/Swiss-Prot;Acc:O44959]
74. Y40B1B.8 Y40B1B.8 4877 7.216 0.874 0.868 0.916 0.868 0.933 0.951 0.903 0.903
75. Y41D4B.19 npp-8 12992 7.216 0.918 0.855 0.954 0.855 0.953 0.909 0.879 0.893 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
76. F33D4.5 mrpl-1 5337 7.215 0.866 0.871 0.937 0.871 0.960 0.906 0.868 0.936 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
77. T03F6.2 dnj-17 3150 7.214 0.893 0.867 0.933 0.867 0.962 0.913 0.881 0.898 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_499759]
78. C37A2.2 pqn-20 10913 7.214 0.853 0.881 0.948 0.881 0.965 0.903 0.859 0.924 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
79. ZK550.4 ZK550.4 5815 7.21 0.884 0.893 0.916 0.893 0.973 0.909 0.844 0.898 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
80. C33H5.12 rsp-6 23342 7.21 0.890 0.864 0.958 0.864 0.955 0.904 0.878 0.897 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
81. T10B5.5 cct-7 24616 7.21 0.871 0.837 0.955 0.837 0.958 0.943 0.874 0.935 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
82. F43G6.9 patr-1 23000 7.21 0.861 0.871 0.924 0.871 0.943 0.955 0.904 0.881 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
83. D2013.7 eif-3.F 21004 7.209 0.882 0.865 0.916 0.865 0.951 0.960 0.859 0.911 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
84. T23B5.1 prmt-3 10677 7.209 0.893 0.883 0.966 0.883 0.953 0.841 0.883 0.907 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
85. Y39G10AR.20 tbca-1 4155 7.208 0.844 0.869 0.890 0.869 0.958 0.973 0.886 0.919 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
86. T11G6.1 hars-1 7908 7.206 0.816 0.860 0.932 0.860 0.947 0.954 0.916 0.921 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
87. F01F1.4 rabn-5 5269 7.205 0.869 0.891 0.931 0.891 0.977 0.950 0.840 0.856 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
88. C10C5.6 daf-15 8724 7.205 0.890 0.878 0.946 0.878 0.967 0.896 0.854 0.896 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
89. C53A5.3 hda-1 18413 7.204 0.857 0.898 0.954 0.898 0.943 0.923 0.840 0.891 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
90. W06H3.2 pus-1 1382 7.202 0.881 0.908 0.910 0.908 0.890 0.900 0.850 0.955 tRNA pseudouridine synthase [Source:RefSeq peptide;Acc:NP_507242]
91. C43E11.1 acin-1 7781 7.202 0.894 0.902 0.977 0.902 0.930 0.860 0.818 0.919 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
92. F35G12.3 sel-5 5924 7.201 0.875 0.908 0.941 0.908 0.954 0.897 0.842 0.876 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_001022562]
93. K08E7.1 eak-7 18960 7.201 0.854 0.872 0.943 0.872 0.967 0.928 0.835 0.930 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
94. C06A5.1 inst-1 5068 7.2 0.887 0.831 0.935 0.831 0.925 0.920 0.916 0.955 INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
95. B0035.3 B0035.3 4118 7.197 0.881 0.860 0.945 0.860 0.973 0.902 0.898 0.878
96. C48E7.3 lpd-2 10330 7.197 0.905 0.884 0.954 0.884 0.897 0.887 0.876 0.910 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
97. F18C5.2 wrn-1 3792 7.197 0.848 0.918 0.945 0.918 0.968 0.835 0.877 0.888 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
98. C01B10.9 C01B10.9 4049 7.196 0.833 0.898 0.952 0.898 0.954 0.899 0.870 0.892
99. T01B7.3 rab-21 2347 7.196 0.825 0.887 0.909 0.887 0.964 0.956 0.902 0.866 RAB family [Source:RefSeq peptide;Acc:NP_495854]
100. C08B11.3 swsn-7 11608 7.196 0.873 0.874 0.948 0.874 0.954 0.910 0.845 0.918 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]

There are 937 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA