C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T03F6.5

Gene ID Gene Name Reads Transcripts Annotation
T03F6.5 lis-1 8818 T03F6.5 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]

Genes with expression patterns similar to T03F6.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T03F6.5 lis-1 8818 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
2. T05C12.7 cct-1 41264 7.698 0.972 0.964 0.973 0.964 0.966 0.965 0.929 0.965 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
3. F54A3.3 cct-3 25183 7.696 0.961 0.968 0.932 0.968 0.965 0.969 0.957 0.976 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
4. T08B2.9 fars-1 12650 7.692 0.961 0.975 0.961 0.975 0.980 0.942 0.928 0.970 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
5. T10B5.5 cct-7 24616 7.677 0.925 0.965 0.958 0.965 0.973 0.942 0.976 0.973 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
6. R07B7.3 pqn-53 10459 7.677 0.966 0.957 0.943 0.957 0.970 0.962 0.947 0.975 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
7. F28H1.3 aars-2 13537 7.676 0.951 0.963 0.971 0.963 0.987 0.952 0.950 0.939 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
8. H21P03.1 mbf-1 25586 7.664 0.962 0.956 0.938 0.956 0.974 0.964 0.954 0.960 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
9. C07G2.3 cct-5 44703 7.663 0.961 0.961 0.929 0.961 0.957 0.978 0.944 0.972 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
10. F01F1.8 cct-6 29460 7.659 0.967 0.969 0.972 0.969 0.949 0.943 0.926 0.964 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
11. K08E7.1 eak-7 18960 7.659 0.961 0.930 0.952 0.930 0.987 0.974 0.965 0.960 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
12. T21B10.7 cct-2 13999 7.655 0.956 0.965 0.957 0.965 0.970 0.948 0.933 0.961 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
13. ZK863.6 dpy-30 16177 7.651 0.952 0.949 0.935 0.949 0.981 0.961 0.964 0.960 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
14. K11D12.2 pqn-51 15951 7.65 0.972 0.947 0.976 0.947 0.978 0.935 0.958 0.937 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
15. K08F4.2 gtbp-1 25222 7.648 0.960 0.973 0.968 0.973 0.977 0.915 0.935 0.947 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
16. F38A5.1 odr-8 5283 7.642 0.945 0.948 0.969 0.948 0.979 0.952 0.948 0.953 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
17. W08E3.3 ola-1 20885 7.642 0.942 0.943 0.934 0.943 0.986 0.967 0.957 0.970 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
18. C52E4.3 snr-4 19308 7.642 0.978 0.972 0.957 0.972 0.978 0.959 0.880 0.946 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
19. T21B10.1 mrpl-50 14595 7.641 0.939 0.975 0.942 0.975 0.973 0.949 0.940 0.948 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
20. ZK637.3 lnkn-1 16095 7.636 0.944 0.962 0.946 0.962 0.962 0.950 0.939 0.971 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
21. B0303.15 mrpl-11 9889 7.633 0.977 0.936 0.942 0.936 0.978 0.970 0.951 0.943 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
22. T01E8.6 mrps-14 9328 7.631 0.952 0.966 0.948 0.966 0.977 0.932 0.944 0.946 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
23. C15H11.4 dhs-22 21674 7.629 0.956 0.953 0.977 0.953 0.958 0.951 0.921 0.960 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
24. ZK742.1 xpo-1 20741 7.621 0.917 0.953 0.954 0.953 0.986 0.930 0.966 0.962 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
25. T11G6.1 hars-1 7908 7.62 0.957 0.962 0.946 0.962 0.970 0.939 0.920 0.964 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
26. F08F8.3 kap-1 31437 7.619 0.965 0.952 0.947 0.952 0.959 0.933 0.936 0.975 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
27. Y54G2A.31 ubc-13 22367 7.618 0.964 0.961 0.966 0.961 0.970 0.973 0.939 0.884 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
28. F13G3.4 dylt-1 21345 7.617 0.968 0.947 0.963 0.947 0.981 0.946 0.918 0.947 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
29. F58E10.3 ddx-17 15107 7.616 0.938 0.962 0.957 0.962 0.969 0.936 0.959 0.933 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
30. D2013.7 eif-3.F 21004 7.614 0.951 0.975 0.933 0.975 0.965 0.954 0.902 0.959 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
31. F33D4.7 emc-6 6534 7.613 0.957 0.949 0.960 0.949 0.949 0.962 0.929 0.958 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
32. ZK1058.4 ccdc-47 8879 7.611 0.950 0.961 0.963 0.961 0.971 0.954 0.908 0.943 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
33. T26A5.9 dlc-1 59038 7.606 0.971 0.939 0.960 0.939 0.951 0.963 0.932 0.951 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
34. K07D4.3 rpn-11 8834 7.605 0.936 0.939 0.962 0.939 0.974 0.961 0.935 0.959 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
35. B0205.11 mrpl-9 9162 7.6 0.950 0.957 0.939 0.957 0.985 0.938 0.954 0.920 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
36. W04D2.5 mrps-11 5757 7.599 0.970 0.955 0.960 0.955 0.965 0.966 0.918 0.910 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
37. T12G3.5 mrpl-51 5192 7.599 0.961 0.956 0.956 0.956 0.946 0.942 0.932 0.950 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
38. R07E5.14 rnp-4 11659 7.598 0.956 0.944 0.967 0.944 0.965 0.952 0.949 0.921 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
39. R151.9 pfd-5 6951 7.597 0.960 0.928 0.906 0.928 0.977 0.969 0.959 0.970 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
40. T24F1.1 raga-1 16171 7.597 0.935 0.943 0.953 0.943 0.956 0.976 0.949 0.942 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
41. F22B5.9 fars-3 7209 7.593 0.969 0.958 0.925 0.958 0.975 0.939 0.932 0.937 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
42. F26F4.10 rars-1 9971 7.591 0.936 0.978 0.941 0.978 0.960 0.917 0.924 0.957 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
43. C53A5.3 hda-1 18413 7.591 0.936 0.939 0.967 0.939 0.974 0.942 0.956 0.938 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
44. F56F3.1 ifet-1 25772 7.59 0.958 0.958 0.964 0.958 0.975 0.898 0.944 0.935 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
45. C08F8.1 pfd-1 10199 7.583 0.966 0.942 0.879 0.942 0.970 0.963 0.952 0.969 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
46. T19B4.2 npp-7 13073 7.581 0.957 0.941 0.984 0.941 0.967 0.902 0.934 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
47. Y71F9B.4 snr-7 13542 7.581 0.957 0.958 0.929 0.958 0.957 0.941 0.956 0.925 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
48. C55A6.2 ttll-5 5158 7.579 0.926 0.970 0.927 0.970 0.972 0.937 0.933 0.944 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
49. T06G6.9 pfd-3 10945 7.577 0.951 0.937 0.929 0.937 0.961 0.953 0.947 0.962 Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
50. Y62E10A.11 mdt-9 5971 7.576 0.958 0.957 0.915 0.957 0.956 0.932 0.957 0.944 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
51. M01B12.3 arx-7 7584 7.575 0.956 0.927 0.946 0.927 0.962 0.972 0.948 0.937 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
52. C47E12.1 sars-1 4942 7.575 0.884 0.950 0.954 0.950 0.977 0.959 0.937 0.964 Probable serine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q18678]
53. Y55F3AR.3 cct-8 17979 7.573 0.964 0.944 0.937 0.944 0.913 0.941 0.959 0.971 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
54. W06H3.3 ctps-1 8363 7.567 0.961 0.950 0.945 0.950 0.973 0.911 0.946 0.931 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
55. C25D7.8 otub-1 7941 7.566 0.963 0.943 0.951 0.943 0.986 0.892 0.931 0.957 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
56. R06A4.4 imb-2 10302 7.565 0.948 0.936 0.970 0.936 0.945 0.939 0.938 0.953 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
57. B0261.4 mrpl-47 8210 7.565 0.937 0.941 0.924 0.941 0.991 0.934 0.944 0.953 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
58. CC4.3 smu-1 4169 7.563 0.941 0.933 0.949 0.933 0.948 0.955 0.969 0.935 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
59. Y49A3A.5 cyn-1 6411 7.562 0.961 0.964 0.917 0.964 0.982 0.911 0.937 0.926 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
60. T05H4.6 erfa-1 12542 7.562 0.957 0.965 0.951 0.965 0.945 0.915 0.918 0.946 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
61. Y79H2A.6 arx-3 17398 7.56 0.956 0.952 0.976 0.952 0.962 0.916 0.917 0.929 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
62. T26E3.3 par-6 8650 7.559 0.937 0.934 0.969 0.934 0.957 0.979 0.926 0.923 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
63. F59E12.11 sam-4 8179 7.556 0.961 0.922 0.960 0.922 0.981 0.940 0.936 0.934
64. Y43F4B.4 npp-18 4780 7.556 0.948 0.930 0.962 0.930 0.964 0.952 0.950 0.920 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
65. E01A2.2 E01A2.2 12356 7.555 0.954 0.965 0.946 0.965 0.961 0.925 0.931 0.908 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
66. T16G1.11 eif-3.K 14014 7.555 0.965 0.964 0.950 0.964 0.960 0.917 0.911 0.924 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
67. H20J04.5 pfd-2 8082 7.554 0.944 0.950 0.867 0.950 0.986 0.942 0.951 0.964 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
68. C33H5.12 rsp-6 23342 7.554 0.928 0.966 0.969 0.966 0.974 0.906 0.910 0.935 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
69. Y73B6BL.6 sqd-1 41708 7.554 0.970 0.967 0.968 0.967 0.938 0.943 0.878 0.923 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
70. W06E11.4 sbds-1 6701 7.553 0.931 0.967 0.940 0.967 0.948 0.916 0.952 0.932 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
71. T17E9.2 nmt-1 8017 7.551 0.980 0.973 0.939 0.973 0.950 0.901 0.890 0.945 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
72. T19C3.8 fem-2 9225 7.55 0.925 0.932 0.972 0.932 0.975 0.960 0.943 0.911 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
73. F26H11.2 nurf-1 13015 7.55 0.939 0.942 0.949 0.942 0.971 0.965 0.947 0.895 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
74. Y39G10AR.20 tbca-1 4155 7.55 0.957 0.937 0.910 0.937 0.979 0.959 0.940 0.931 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
75. Y116A8C.42 snr-1 17062 7.549 0.959 0.958 0.964 0.958 0.966 0.871 0.948 0.925 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
76. Y37E3.9 phb-1 29211 7.549 0.943 0.951 0.861 0.951 0.983 0.970 0.931 0.959 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
77. F55F10.1 F55F10.1 9760 7.547 0.957 0.939 0.965 0.939 0.959 0.935 0.941 0.912 Midasin [Source:RefSeq peptide;Acc:NP_500551]
78. Y47D3A.21 Y47D3A.21 6853 7.544 0.963 0.952 0.932 0.952 0.955 0.932 0.921 0.937 Density-regulated protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NAH4]
79. F09G2.9 attf-2 14771 7.544 0.943 0.951 0.943 0.951 0.944 0.963 0.923 0.926 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
80. R05D11.3 ran-4 15494 7.544 0.965 0.947 0.951 0.947 0.959 0.930 0.892 0.953 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
81. H17B01.4 emc-1 9037 7.542 0.892 0.939 0.957 0.939 0.983 0.943 0.932 0.957 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
82. R09B3.5 mag-1 7496 7.542 0.931 0.946 0.949 0.946 0.968 0.937 0.958 0.907 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
83. F32A5.7 lsm-4 3785 7.541 0.939 0.926 0.950 0.926 0.975 0.959 0.956 0.910 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
84. B0285.1 cdk-12 5900 7.541 0.954 0.925 0.958 0.925 0.960 0.955 0.915 0.949 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
85. Y41D4B.13 ced-2 10100 7.54 0.908 0.928 0.966 0.928 0.968 0.963 0.971 0.908 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
86. T28D9.10 snr-3 9995 7.54 0.962 0.959 0.906 0.959 0.979 0.910 0.943 0.922 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
87. F32H2.1 snpc-4 7581 7.539 0.917 0.952 0.953 0.952 0.970 0.903 0.946 0.946 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
88. F42A6.7 hrp-1 28201 7.538 0.960 0.925 0.975 0.925 0.980 0.885 0.939 0.949 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
89. Y73B6BL.32 lsm-8 11002 7.536 0.952 0.958 0.929 0.958 0.971 0.921 0.921 0.926 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
90. F58D5.1 hrp-2 17211 7.536 0.938 0.962 0.951 0.962 0.982 0.895 0.928 0.918 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
91. R74.1 lars-1 8467 7.536 0.911 0.948 0.902 0.948 0.972 0.966 0.926 0.963 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
92. D2013.2 wdfy-2 7286 7.535 0.954 0.928 0.955 0.928 0.984 0.939 0.916 0.931 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
93. Y54E2A.2 smg-9 4494 7.534 0.931 0.948 0.969 0.948 0.982 0.910 0.893 0.953
94. T06A10.4 lsy-13 7631 7.533 0.957 0.964 0.962 0.964 0.977 0.902 0.933 0.874
95. R07E5.10 pdcd-2 5211 7.533 0.958 0.969 0.940 0.969 0.954 0.913 0.900 0.930 Vacuolar ATPase assembly integral membrane protein VMA21 homolog [Source:UniProtKB/Swiss-Prot;Acc:A5JYQ9]
96. M88.5 zbp-1 11851 7.533 0.934 0.953 0.909 0.953 0.961 0.890 0.955 0.978 Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
97. K04G7.10 rnp-7 11219 7.532 0.950 0.951 0.937 0.951 0.945 0.932 0.902 0.964 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
98. ZC410.2 mppb-1 3991 7.532 0.960 0.945 0.878 0.945 0.957 0.962 0.935 0.950 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
99. B0464.7 baf-1 10161 7.53 0.966 0.944 0.890 0.944 0.969 0.946 0.948 0.923 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
100. Y39A1C.3 cey-4 50694 7.528 0.967 0.950 0.892 0.950 0.954 0.952 0.918 0.945 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]

There are 2279 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA