C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y56A3A.18

Gene ID Gene Name Reads Transcripts Annotation
Y56A3A.18 Y56A3A.18 6084 Y56A3A.18 Zinc finger protein 593 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U239]

Genes with expression patterns similar to Y56A3A.18

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y56A3A.18 Y56A3A.18 6084 2 - 1.000 - 1.000 - - - - Zinc finger protein 593 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U239]
2. W09C5.1 W09C5.1 15066 1.954 - 0.977 - 0.977 - - - -
3. Y61A9LA.10 Y61A9LA.10 4965 1.94 - 0.970 - 0.970 - - - -
4. F52B5.6 rpl-25.2 100512 1.938 - 0.969 - 0.969 - - - - 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
5. Y40B1B.5 eif-3.J 15061 1.936 - 0.968 - 0.968 - - - - Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
6. ZC395.10 ZC395.10 52474 1.934 - 0.967 - 0.967 - - - - Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
7. K09H9.7 K09H9.7 15593 1.934 - 0.967 - 0.967 - - - -
8. C26D10.2 hel-1 28697 1.932 - 0.966 - 0.966 - - - - Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
9. Y18D10A.17 car-1 87364 1.932 - 0.966 - 0.966 - - - - Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
10. W08E12.7 W08E12.7 58549 1.93 - 0.965 - 0.965 - - - -
11. C15H11.9 rrbs-1 9177 1.928 - 0.964 - 0.964 - - - - Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
12. K09H9.6 lpd-6 5459 1.928 - 0.964 - 0.964 - - - - LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
13. M28.5 M28.5 27326 1.928 - 0.964 - 0.964 - - - - NHP2-like protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21568]
14. T03D8.2 mrps-12 8253 1.926 - 0.963 - 0.963 - - - - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
15. R02F2.9 R02F2.9 5534 1.926 - 0.963 - 0.963 - - - -
16. T06G6.9 pfd-3 10945 1.926 - 0.963 - 0.963 - - - - Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
17. T10B5.3 T10B5.3 15788 1.926 - 0.963 - 0.963 - - - -
18. F46B6.7 ztf-7 25674 1.924 - 0.962 - 0.962 - - - - Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_505526]
19. Y113G7B.17 prmt-1 43709 1.924 - 0.962 - 0.962 - - - - PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
20. Y37E3.8 Y37E3.8 71903 1.922 - 0.961 - 0.961 - - - -
21. C26D10.1 ran-3 11111 1.922 - 0.961 - 0.961 - - - - Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
22. K01G5.5 K01G5.5 24521 1.922 - 0.961 - 0.961 - - - - Putative H/ACA ribonucleoprotein complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O17919]
23. Y82E9BR.22 Y82E9BR.22 4356 1.922 - 0.961 - 0.961 - - - -
24. R02F11.4 R02F11.4 54145 1.92 - 0.960 - 0.960 - - - -
25. F23B12.7 F23B12.7 9244 1.92 - 0.960 - 0.960 - - - -
26. Y54H5A.1 Y54H5A.1 12787 1.92 - 0.960 - 0.960 - - - -
27. C01G10.8 C01G10.8 5587 1.92 - 0.960 - 0.960 - - - -
28. B0261.4 mrpl-47 8210 1.918 - 0.959 - 0.959 - - - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
29. T22A3.5 pash-1 3240 1.918 - 0.959 - 0.959 - - - - PArtner of DroSHa (DRSH-1 interactor) [Source:RefSeq peptide;Acc:NP_001293461]
30. T23F6.4 rbd-1 5825 1.918 - 0.959 - 0.959 - - - - RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
31. M01B12.5 riok-1 6698 1.918 - 0.959 - 0.959 - - - - Serine/threonine-protein kinase RIO1 [Source:UniProtKB/Swiss-Prot;Acc:O44959]
32. Y48B6A.1 Y48B6A.1 7577 1.918 - 0.959 - 0.959 - - - - Ribosome biogenesis protein BOP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A9]
33. F01F1.7 ddx-23 4217 1.916 - 0.958 - 0.958 - - - - DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
34. F19F10.10 ets-6 1342 1.916 - 0.958 - 0.958 - - - - ETS class transcription factor [Source:RefSeq peptide;Acc:NP_504954]
35. D2030.6 prg-1 26751 1.914 - 0.957 - 0.957 - - - - Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
36. C49H3.10 xpo-3 9101 1.914 - 0.957 - 0.957 - - - - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
37. F57B9.5 byn-1 58236 1.914 - 0.957 - 0.957 - - - - Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
38. K04D7.2 mspn-1 48187 1.914 - 0.957 - 0.957 - - - - Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
39. C08B6.8 C08B6.8 2579 1.914 - 0.957 - 0.957 - - - - Probable oligoribonuclease [Source:UniProtKB/Swiss-Prot;Acc:Q17819]
40. H27M09.3 syp-4 5331 1.914 - 0.957 - 0.957 - - - -
41. Y47G6A.9 Y47G6A.9 4606 1.914 - 0.957 - 0.957 - - - -
42. C06E1.9 C06E1.9 2987 1.914 - 0.957 - 0.957 - - - -
43. C43E11.9 C43E11.9 4422 1.914 - 0.957 - 0.957 - - - - 60S ribosome subunit biogenesis protein NIP7 homolog [Source:RefSeq peptide;Acc:NP_491342]
44. F56D1.3 mrps-16 2309 1.912 - 0.956 - 0.956 - - - - Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
45. ZK593.5 dnc-1 2911 1.912 - 0.956 - 0.956 - - - - DyNactin Complex component [Source:RefSeq peptide;Acc:NP_001255520]
46. Y73B6BL.30 blos-2 6227 1.912 - 0.956 - 0.956 - - - - Biogenesis of lysosome-related organelles complex 1 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q95XD3]
47. W09C5.6 rpl-31 156225 1.912 - 0.956 - 0.956 - - - - 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
48. Y73B6BL.32 lsm-8 11002 1.912 - 0.956 - 0.956 - - - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
49. F39B2.10 dnj-12 35162 1.912 - 0.956 - 0.956 - - - - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
50. Y23H5B.6 Y23H5B.6 5886 1.912 - 0.956 - 0.956 - - - -
51. T24B1.1 T24B1.1 6744 1.912 - 0.956 - 0.956 - - - - Golgin-84 [Source:UniProtKB/Swiss-Prot;Acc:P90970]
52. Y48B6A.14 hmg-1.1 88723 1.912 - 0.956 - 0.956 - - - - HMG [Source:RefSeq peptide;Acc:NP_496970]
53. R09B3.3 R09B3.3 67051 1.912 - 0.956 - 0.956 - - - -
54. Y48G8AL.1 herc-1 3873 1.91 - 0.955 - 0.955 - - - - HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]
55. Y17G9B.8 Y17G9B.8 1255 1.91 - 0.955 - 0.955 - - - -
56. C27D11.1 egl-45 28282 1.91 - 0.955 - 0.955 - - - - Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
57. T05E8.3 let-355 8169 1.91 - 0.955 - 0.955 - - - -
58. C05C8.2 C05C8.2 4314 1.91 - 0.955 - 0.955 - - - - KRR1 small subunit processome component [Source:RefSeq peptide;Acc:NP_504837]
59. D2096.8 nap-1 59459 1.91 - 0.955 - 0.955 - - - - Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
60. C41G7.3 C41G7.3 34268 1.91 - 0.955 - 0.955 - - - -
61. C53D5.6 imb-3 28921 1.91 - 0.955 - 0.955 - - - - IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
62. M03C11.5 ymel-1 6878 1.908 - 0.954 - 0.954 - - - - ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]
63. Y54E10A.9 vbh-1 28746 1.908 - 0.954 - 0.954 - - - - Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
64. Y42H9AR.1 Y42H9AR.1 5838 1.908 - 0.954 - 0.954 - - - -
65. C28A5.2 C28A5.2 628 1.908 - 0.954 - 0.954 - - - -
66. K12H4.4 K12H4.4 8351 1.908 - 0.954 - 0.954 - - - - Probable signal peptidase complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34525]
67. B0041.7 xnp-1 9187 1.908 - 0.954 - 0.954 - - - - Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
68. Y47G6A.11 msh-6 2767 1.908 - 0.954 - 0.954 - - - - MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491163]
69. M01E11.3 M01E11.3 1946 1.908 - 0.954 - 0.954 - - - -
70. T28D9.2 rsp-5 6460 1.908 - 0.954 - 0.954 - - - - Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
71. K10D2.3 cid-1 7175 1.908 - 0.954 - 0.954 - - - - Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
72. C15H11.6 nxf-2 1545 1.906 - 0.953 - 0.953 - - - - Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]
73. F19B6.2 ufd-1 15357 1.906 - 0.953 - 0.953 - - - - Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
74. F31D4.3 fkb-6 21313 1.906 - 0.953 - 0.953 - - - - FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
75. Y46G5A.1 tbc-17 3677 1.906 - 0.953 - 0.953 - - - - TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001022434]
76. C27H6.2 ruvb-1 6291 1.906 - 0.953 - 0.953 - - - - RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
77. T07A9.14 T07A9.14 112108 1.906 - 0.953 - 0.953 - - - -
78. M18.5 ddb-1 3823 1.906 - 0.953 - 0.953 - - - - DNA damage-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21554]
79. C16A3.6 C16A3.6 11397 1.904 - 0.952 - 0.952 - - - -
80. Y65B4BR.5 icd-2 58321 1.904 - 0.952 - 0.952 - - - - Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
81. Y39A1A.14 Y39A1A.14 1887 1.904 - 0.952 - 0.952 - - - - Ribosomal RNA small subunit methyltransferase nep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XX15]
82. F42A6.7 hrp-1 28201 1.904 - 0.952 - 0.952 - - - - Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
83. F54C8.3 emb-30 2630 1.904 - 0.952 - 0.952 - - - - Abnormal embryogenesis protein 30 [Source:UniProtKB/Swiss-Prot;Acc:P34441]
84. C50F2.3 C50F2.3 3084 1.904 - 0.952 - 0.952 - - - -
85. F28B3.7 him-1 18274 1.904 - 0.952 - 0.952 - - - - Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
86. F26D10.3 hsp-1 98277 1.904 - 0.952 - 0.952 - - - - Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
87. W01D2.1 W01D2.1 73117 1.904 - 0.952 - 0.952 - - - - Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
88. R06B9.6 mig-14 2464 1.904 - 0.952 - 0.952 - - - -
89. T23H2.3 T23H2.3 2687 1.904 - 0.952 - 0.952 - - - -
90. C17H12.13 anat-1 12995 1.904 - 0.952 - 0.952 - - - - AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
91. C44E4.4 C44E4.4 17818 1.902 - 0.951 - 0.951 - - - -
92. K08D12.3 K08D12.3 66743 1.902 - 0.951 - 0.951 - - - -
93. ZK652.3 ufm-1 12647 1.902 - 0.951 - 0.951 - - - - Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
94. Y105E8A.16 rps-20 146067 1.902 - 0.951 - 0.951 - - - - Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
95. C30G12.6 C30G12.6 2937 1.902 - 0.951 - 0.951 - - - -
96. C34E10.5 prmt-5 12277 1.902 - 0.951 - 0.951 - - - - Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
97. Y17G7A.1 hmg-12 29989 1.902 - 0.951 - 0.951 - - - - HMG [Source:RefSeq peptide;Acc:NP_496544]
98. ZK945.3 puf-12 6266 1.902 - 0.951 - 0.951 - - - - Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
99. C03D6.8 rpl-24.2 5932 1.902 - 0.951 - 0.951 - - - - Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
100. F56E10.4 rps-27 162794 1.902 - 0.951 - 0.951 - - - - 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]

There are 27 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA