C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y113G7B.17

Gene ID Gene Name Reads Transcripts Annotation
Y113G7B.17 prmt-1 43709 Y113G7B.17.1, Y113G7B.17.2 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]

Genes with expression patterns similar to Y113G7B.17

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y113G7B.17 prmt-1 43709 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
2. W01B11.3 nol-5 23544 7.896 0.973 0.991 0.980 0.991 0.985 0.990 0.994 0.992 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
3. T01C3.7 fib-1 23572 7.89 0.988 0.980 0.978 0.980 0.995 0.994 0.985 0.990 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
4. D2096.8 nap-1 59459 7.874 0.974 0.995 0.973 0.995 0.997 0.984 0.973 0.983 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
5. C25A1.10 dao-5 18351 7.831 0.964 0.983 0.982 0.983 0.987 0.980 0.968 0.984 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
6. C16A3.3 let-716 8448 7.801 0.929 0.984 0.979 0.984 0.983 0.985 0.982 0.975
7. C15H11.9 rrbs-1 9177 7.79 0.959 0.984 0.976 0.984 0.984 0.925 0.993 0.985 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
8. C27H6.2 ruvb-1 6291 7.768 0.961 0.970 0.967 0.970 0.959 0.990 0.985 0.966 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
9. T21G5.3 glh-1 16470 7.766 0.963 0.983 0.971 0.983 0.970 0.975 0.958 0.963 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
10. F56D12.5 vig-1 42594 7.766 0.972 0.976 0.989 0.976 0.957 0.976 0.963 0.957 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
11. C03D6.8 rpl-24.2 5932 7.754 0.964 0.976 0.950 0.976 0.962 0.969 0.976 0.981 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
12. Y53C12B.3 nos-3 20231 7.752 0.963 0.964 0.953 0.964 0.977 0.968 0.979 0.984 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
13. T23F6.4 rbd-1 5825 7.749 0.928 0.982 0.974 0.982 0.957 0.968 0.961 0.997 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
14. F10G7.1 tag-151 9031 7.731 0.945 0.968 0.982 0.968 0.990 0.975 0.953 0.950 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
15. Y48B6A.3 xrn-2 4881 7.727 0.949 0.965 0.965 0.965 0.992 0.931 0.975 0.985 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
16. T05G5.10 iff-1 42569 7.722 0.954 0.977 0.966 0.977 0.960 0.973 0.956 0.959 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
17. ZK945.3 puf-12 6266 7.721 0.873 0.984 0.956 0.984 0.987 0.976 0.981 0.980 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
18. R13A5.12 lpd-7 10476 7.719 0.938 0.970 0.960 0.970 0.978 0.942 0.979 0.982 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
19. T19A6.2 ngp-1 5884 7.716 0.931 0.973 0.962 0.973 0.974 0.972 0.961 0.970 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
20. Y37D8A.11 cec-7 8801 7.712 0.954 0.955 0.968 0.955 0.992 0.972 0.988 0.928 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
21. W07E6.1 nol-1 7892 7.711 0.915 0.959 0.941 0.959 0.980 0.987 0.974 0.996 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
22. Y116A8C.42 snr-1 17062 7.708 0.957 0.961 0.970 0.961 0.981 0.964 0.975 0.939 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
23. Y71G12B.8 ddx-27 3584 7.707 0.919 0.954 0.957 0.954 0.979 0.989 0.973 0.982 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
24. C07E3.2 pro-2 4193 7.705 0.954 0.947 0.960 0.947 0.981 0.976 0.976 0.964 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
25. T07A9.9 nog-1 19728 7.705 0.960 0.988 0.980 0.988 0.939 0.949 0.936 0.965 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
26. Y18D10A.19 fkb-2 48128 7.694 0.974 0.977 0.948 0.977 0.948 0.977 0.933 0.960 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
27. Y23H5B.6 Y23H5B.6 5886 7.694 0.939 0.968 0.942 0.968 0.988 0.955 0.951 0.983
28. F55H2.6 clu-1 21404 7.694 0.958 0.969 0.952 0.969 0.979 0.957 0.964 0.946 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
29. K08F4.2 gtbp-1 25222 7.687 0.938 0.959 0.958 0.959 0.974 0.966 0.963 0.970 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
30. C56C10.8 icd-1 89788 7.686 0.963 0.980 0.975 0.980 0.940 0.946 0.960 0.942 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
31. K07C5.6 K07C5.6 7375 7.683 0.964 0.884 0.981 0.884 0.997 0.990 0.987 0.996 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
32. T28D9.10 snr-3 9995 7.683 0.928 0.969 0.971 0.969 0.978 0.952 0.954 0.962 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
33. T03D8.2 mrps-12 8253 7.676 0.940 0.979 0.955 0.979 0.985 0.932 0.968 0.938 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
34. Y54H5A.2 Y54H5A.2 2168 7.663 0.954 0.933 0.971 0.933 0.991 0.920 0.974 0.987
35. Y54E5A.6 Y54E5A.6 770 7.658 0.960 0.931 0.966 0.931 0.990 0.943 0.964 0.973
36. C06A1.5 rpb-6 7515 7.657 0.938 0.964 0.949 0.964 0.960 0.925 0.979 0.978 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
37. C26E6.4 rpb-2 7053 7.654 0.932 0.970 0.963 0.970 0.963 0.938 0.951 0.967 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
38. K09H9.6 lpd-6 5459 7.652 0.965 0.977 0.950 0.977 0.989 0.904 0.985 0.905 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
39. F09F7.3 rpc-2 9751 7.651 0.944 0.957 0.955 0.957 0.984 0.971 0.983 0.900 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
40. R13F6.10 cra-1 11610 7.648 0.966 0.961 0.968 0.961 0.939 0.960 0.936 0.957 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
41. C01G8.6 hpo-32 7439 7.646 0.967 0.940 0.949 0.940 0.966 0.951 0.974 0.959
42. F20A1.9 tofu-2 3341 7.645 0.917 0.965 0.950 0.965 0.987 0.951 0.973 0.937 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
43. F14B4.3 rpoa-2 7549 7.642 0.905 0.959 0.924 0.959 0.992 0.963 0.988 0.952 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
44. F58A4.9 rpac-19 2692 7.64 0.934 0.952 0.936 0.952 0.990 0.961 0.932 0.983 Probable DNA-directed RNA polymerases I and III subunit RPAC2 [Source:UniProtKB/Swiss-Prot;Acc:P34476]
45. B0414.3 hil-5 10816 7.633 0.865 0.936 0.970 0.936 0.980 0.985 0.975 0.986 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
46. Y75B12B.2 cyn-7 98281 7.632 0.974 0.979 0.967 0.979 0.924 0.904 0.958 0.947 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
47. C53D5.6 imb-3 28921 7.632 0.952 0.973 0.974 0.973 0.909 0.943 0.940 0.968 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
48. B0035.12 sart-3 7188 7.632 0.952 0.955 0.966 0.955 0.978 0.944 0.970 0.912 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
49. K01G5.8 K01G5.8 4694 7.628 0.962 0.895 0.976 0.895 0.974 0.966 0.978 0.982
50. H12I13.4 fbf-1 5587 7.625 0.921 0.960 0.947 0.960 0.977 0.972 0.922 0.966 Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
51. T22D1.10 ruvb-2 6505 7.625 0.969 0.956 0.949 0.956 0.940 0.965 0.950 0.940 RuvB-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH2]
52. F52B5.6 rpl-25.2 100512 7.623 0.977 0.974 0.965 0.974 0.895 0.962 0.934 0.942 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
53. K07F5.15 K07F5.15 10171 7.623 0.937 0.952 0.948 0.952 0.964 0.982 0.920 0.968
54. F18C5.3 tag-184 4027 7.621 0.900 0.972 0.958 0.972 0.963 0.960 0.984 0.912
55. R144.7 larp-1 24669 7.621 0.969 0.979 0.960 0.979 0.937 0.949 0.904 0.944 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
56. F55F8.3 F55F8.3 2107 7.621 0.898 0.930 0.952 0.930 0.984 0.994 0.964 0.969 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
57. F59A2.3 cri-3 15077 7.615 0.933 0.977 0.923 0.977 0.954 0.943 0.940 0.968 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
58. F55A12.8 nath-10 4253 7.615 0.861 0.958 0.973 0.958 0.988 0.960 0.963 0.954 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
59. T28D9.2 rsp-5 6460 7.613 0.907 0.968 0.939 0.968 0.966 0.926 0.975 0.964 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
60. Y105E8B.3 riok-2 5531 7.612 0.961 0.968 0.940 0.968 0.981 0.964 0.883 0.947 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
61. B0513.2 B0513.2 3641 7.609 0.910 0.948 0.943 0.948 0.970 0.935 0.983 0.972
62. K01G5.2 hpl-2 6781 7.608 0.915 0.952 0.960 0.952 0.968 0.944 0.941 0.976 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
63. K01G5.4 ran-1 32379 7.608 0.899 0.953 0.952 0.953 0.955 0.955 0.973 0.968 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
64. K08F11.3 cif-1 10218 7.605 0.948 0.968 0.962 0.968 0.937 0.932 0.926 0.964 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
65. C14A4.14 mrps-22 7966 7.605 0.943 0.953 0.939 0.953 0.949 0.913 0.985 0.970 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
66. F56D2.6 ddx-15 12282 7.604 0.950 0.941 0.942 0.941 0.962 0.968 0.928 0.972 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
67. K04C2.3 K04C2.3 23540 7.602 0.975 0.884 0.970 0.884 0.988 0.950 0.963 0.988
68. Y111B2A.2 Y111B2A.2 21569 7.599 0.891 0.978 0.969 0.978 0.976 0.929 0.947 0.931
69. C14A4.4 crn-3 6558 7.598 0.942 0.957 0.960 0.957 0.905 0.974 0.941 0.962 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
70. Y71G12B.9 lin-65 7476 7.598 0.901 0.949 0.954 0.949 0.986 0.949 0.967 0.943 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
71. ZC434.5 ears-1 4725 7.597 0.883 0.964 0.949 0.964 0.950 0.967 0.955 0.965 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
72. D2023.5 mpst-1 10328 7.597 0.933 0.972 0.949 0.972 0.968 0.883 0.962 0.958 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
73. C27H6.3 tofu-1 2992 7.596 0.928 0.949 0.954 0.949 0.983 0.933 0.974 0.926 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
74. T21C9.12 scpl-4 14723 7.594 0.947 0.970 0.972 0.970 0.936 0.950 0.904 0.945 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
75. C26D10.1 ran-3 11111 7.594 0.893 0.964 0.966 0.964 0.944 0.960 0.964 0.939 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
76. F21H12.5 fbf-2 4640 7.592 0.923 0.943 0.910 0.943 0.980 0.974 0.972 0.947 Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09312]
77. Y46G5A.4 snrp-200 13827 7.59 0.908 0.955 0.960 0.955 0.966 0.964 0.939 0.943 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
78. C48B4.11 C48B4.11 4384 7.59 0.916 0.944 0.926 0.944 0.962 0.948 0.971 0.979
79. Y65B4BR.5 icd-2 58321 7.589 0.964 0.980 0.978 0.980 0.934 0.928 0.889 0.936 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
80. B0261.4 mrpl-47 8210 7.589 0.939 0.957 0.963 0.957 0.947 0.929 0.956 0.941 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
81. R166.4 pro-1 2701 7.588 0.906 0.914 0.947 0.914 0.990 0.967 0.975 0.975 Pre-rRNA-processing protein pro-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22006]
82. Y111B2A.17 elpc-2 3504 7.587 0.953 0.953 0.964 0.953 0.964 0.887 0.981 0.932 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
83. Y39E4B.2 snpc-1.2 5800 7.586 0.928 0.927 0.912 0.927 0.982 0.950 0.986 0.974 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
84. F32H2.1 snpc-4 7581 7.585 0.949 0.934 0.931 0.934 0.965 0.963 0.962 0.947 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
85. F53F4.12 F53F4.12 2683 7.585 0.923 0.906 0.960 0.906 0.970 0.940 0.990 0.990
86. C07H6.5 cgh-1 60576 7.583 0.931 0.954 0.949 0.954 0.968 0.927 0.973 0.927 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
87. T23G11.3 gld-1 41748 7.581 0.944 0.957 0.966 0.957 0.967 0.886 0.955 0.949 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
88. Y37E3.7 rla-1 55876 7.581 0.962 0.959 0.961 0.959 0.950 0.941 0.935 0.914 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
89. F21C3.4 rde-2 6286 7.58 0.934 0.928 0.949 0.928 0.971 0.952 0.974 0.944
90. T25G3.4 T25G3.4 9394 7.579 0.935 0.935 0.951 0.935 0.991 0.932 0.988 0.912 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
91. C34E10.2 gop-2 5684 7.579 0.929 0.956 0.943 0.956 0.985 0.910 0.940 0.960 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
92. T22F3.4 rpl-11.1 68403 7.576 0.974 0.977 0.980 0.977 0.931 0.796 0.957 0.984 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
93. Y71F9B.4 snr-7 13542 7.575 0.929 0.948 0.933 0.948 0.978 0.935 0.935 0.969 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
94. Y17G7A.1 hmg-12 29989 7.574 0.922 0.964 0.949 0.964 0.976 0.954 0.935 0.910 HMG [Source:RefSeq peptide;Acc:NP_496544]
95. F59A2.1 npp-9 34375 7.574 0.922 0.926 0.943 0.926 0.996 0.922 0.976 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
96. Y50D7A.9 taco-1 5949 7.574 0.916 0.938 0.936 0.938 0.970 0.920 0.983 0.973 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
97. T02G5.9 kars-1 9763 7.573 0.895 0.957 0.958 0.957 0.964 0.941 0.938 0.963 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
98. ZK328.2 eftu-2 7040 7.571 0.928 0.949 0.948 0.949 0.970 0.935 0.921 0.971 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
99. C34E10.5 prmt-5 12277 7.571 0.943 0.968 0.973 0.968 0.944 0.933 0.900 0.942 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
100. K12C11.2 smo-1 12784 7.57 0.897 0.954 0.917 0.954 0.969 0.969 0.942 0.968 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]

There are 1367 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA