C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F01F1.7

Gene ID Gene Name Reads Transcripts Annotation
F01F1.7 ddx-23 4217 F01F1.7 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]

Genes with expression patterns similar to F01F1.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F01F1.7 ddx-23 4217 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
2. Y37E3.15 npp-13 7250 7.717 0.952 0.969 0.892 0.969 0.982 0.990 0.983 0.980 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
3. Y71G12B.9 lin-65 7476 7.7 0.962 0.971 0.892 0.971 0.977 0.989 0.976 0.962 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
4. B0464.2 ctr-9 7610 7.698 0.973 0.967 0.908 0.967 0.958 0.990 0.961 0.974 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
5. Y46G5A.4 snrp-200 13827 7.693 0.965 0.971 0.887 0.971 0.967 0.989 0.976 0.967 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
6. C14A4.4 crn-3 6558 7.678 0.949 0.980 0.946 0.980 0.923 0.986 0.979 0.935 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
7. ZK328.2 eftu-2 7040 7.675 0.962 0.961 0.930 0.961 0.950 0.975 0.977 0.959 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
8. Y53C12B.3 nos-3 20231 7.664 0.930 0.980 0.899 0.980 0.968 0.977 0.975 0.955 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
9. C26E6.4 rpb-2 7053 7.652 0.955 0.984 0.859 0.984 0.945 0.978 0.981 0.966 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
10. F56D2.6 ddx-15 12282 7.65 0.966 0.973 0.856 0.973 0.956 0.985 0.976 0.965 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
11. Y37D8A.11 cec-7 8801 7.635 0.940 0.972 0.906 0.972 0.983 0.956 0.960 0.946 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
12. F23F1.1 nfyc-1 9983 7.631 0.961 0.958 0.907 0.958 0.960 0.958 0.969 0.960 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
13. C04H5.6 mog-4 4517 7.631 0.939 0.949 0.913 0.949 0.962 0.983 0.964 0.972 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
14. T26A5.5 jhdm-1 12698 7.631 0.981 0.972 0.911 0.972 0.962 0.976 0.955 0.902 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
15. Y38A8.3 ulp-2 7403 7.629 0.958 0.961 0.910 0.961 0.952 0.971 0.972 0.944 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
16. E01A2.4 let-504 9788 7.621 0.954 0.973 0.912 0.973 0.956 0.935 0.971 0.947
17. Y18D10A.1 attf-6 6942 7.621 0.962 0.964 0.894 0.964 0.938 0.980 0.964 0.955 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
18. F18A1.8 pid-1 3751 7.612 0.930 0.952 0.959 0.952 0.987 0.960 0.970 0.902 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
19. F32H2.1 snpc-4 7581 7.612 0.954 0.960 0.877 0.960 0.952 0.981 0.972 0.956 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
20. Y17G7A.1 hmg-12 29989 7.609 0.940 0.976 0.882 0.976 0.973 0.972 0.953 0.937 HMG [Source:RefSeq peptide;Acc:NP_496544]
21. Y37A1B.1 lst-3 10739 7.607 0.962 0.966 0.897 0.966 0.912 0.963 0.969 0.972 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
22. T28D9.2 rsp-5 6460 7.606 0.929 0.970 0.898 0.970 0.957 0.953 0.984 0.945 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
23. M01B12.5 riok-1 6698 7.604 0.936 0.972 0.944 0.972 0.926 0.967 0.932 0.955 Serine/threonine-protein kinase RIO1 [Source:UniProtKB/Swiss-Prot;Acc:O44959]
24. F59A2.1 npp-9 34375 7.602 0.941 0.971 0.877 0.971 0.984 0.967 0.950 0.941 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
25. R12C12.2 ran-5 14517 7.602 0.919 0.958 0.911 0.958 0.959 0.978 0.983 0.936 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
26. C34E10.5 prmt-5 12277 7.598 0.941 0.974 0.903 0.974 0.957 0.966 0.961 0.922 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
27. C41C4.6 ulp-4 13338 7.597 0.956 0.963 0.920 0.963 0.966 0.970 0.937 0.922 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
28. F58B3.6 F58B3.6 3464 7.597 0.897 0.936 0.950 0.936 0.957 0.977 0.980 0.964
29. Y41D4B.19 npp-8 12992 7.596 0.948 0.970 0.897 0.970 0.950 0.964 0.969 0.928 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
30. F52C9.7 mog-3 9880 7.595 0.916 0.947 0.901 0.947 0.983 0.982 0.981 0.938 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
31. Y116A8C.42 snr-1 17062 7.594 0.913 0.972 0.878 0.972 0.979 0.979 0.958 0.943 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
32. Y54E5A.4 npp-4 6288 7.59 0.913 0.970 0.883 0.970 0.963 0.956 0.964 0.971 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
33. T23H2.1 npp-12 12425 7.59 0.959 0.963 0.861 0.963 0.961 0.979 0.965 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
34. K01G5.4 ran-1 32379 7.588 0.937 0.967 0.889 0.967 0.946 0.984 0.956 0.942 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
35. T23F6.4 rbd-1 5825 7.584 0.898 0.979 0.928 0.979 0.931 0.962 0.973 0.934 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
36. C48B4.11 C48B4.11 4384 7.58 0.921 0.973 0.881 0.973 0.959 0.958 0.964 0.951
37. T23B5.1 prmt-3 10677 7.576 0.924 0.937 0.901 0.937 0.966 0.949 0.987 0.975 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
38. R13F6.10 cra-1 11610 7.573 0.943 0.967 0.883 0.967 0.933 0.980 0.958 0.942 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
39. Y23H5B.6 Y23H5B.6 5886 7.572 0.927 0.975 0.884 0.975 0.964 0.951 0.956 0.940
40. F55F8.3 F55F8.3 2107 7.57 0.926 0.951 0.929 0.951 0.967 0.955 0.987 0.904 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
41. W08D2.7 mtr-4 2699 7.57 0.907 0.971 0.912 0.971 0.932 0.967 0.951 0.959 mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
42. F33D4.5 mrpl-1 5337 7.57 0.915 0.952 0.884 0.952 0.965 0.978 0.965 0.959 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
43. T05E8.3 let-355 8169 7.568 0.939 0.971 0.925 0.971 0.930 0.926 0.955 0.951
44. K01C8.9 nst-1 4587 7.567 0.962 0.947 0.883 0.947 0.947 0.969 0.983 0.929 Guanine nucleotide-binding protein-like 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21086]
45. F18C5.2 wrn-1 3792 7.566 0.935 0.967 0.885 0.967 0.974 0.969 0.974 0.895 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
46. C16C10.6 ccdc-55 3581 7.565 0.972 0.913 0.898 0.913 0.966 0.959 0.986 0.958 Nuclear speckle splicing regulatory protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09252]
47. F10E9.7 F10E9.7 1842 7.565 0.933 0.911 0.915 0.911 0.981 0.976 0.992 0.946
48. Y65B4BL.2 deps-1 18277 7.563 0.947 0.966 0.893 0.966 0.946 0.963 0.945 0.937
49. T21G5.3 glh-1 16470 7.563 0.920 0.961 0.856 0.961 0.961 0.969 0.986 0.949 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
50. W02D9.1 pri-2 6048 7.562 0.929 0.946 0.931 0.946 0.942 0.956 0.968 0.944 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
51. F28H1.3 aars-2 13537 7.561 0.925 0.972 0.869 0.972 0.950 0.955 0.952 0.966 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
52. R05D3.11 met-2 3364 7.561 0.957 0.963 0.879 0.963 0.931 0.960 0.967 0.941 Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
53. F58B3.5 mars-1 6729 7.56 0.914 0.949 0.870 0.949 0.980 0.972 0.955 0.971 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
54. K12C11.2 smo-1 12784 7.559 0.934 0.955 0.896 0.955 0.961 0.955 0.962 0.941 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
55. F14B4.3 rpoa-2 7549 7.558 0.954 0.970 0.940 0.970 0.974 0.964 0.942 0.844 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
56. ZK973.2 cec-10 7108 7.557 0.947 0.949 0.909 0.949 0.960 0.967 0.939 0.937 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
57. ZK1128.6 ttll-4 6059 7.557 0.896 0.978 0.875 0.978 0.970 0.953 0.962 0.945 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
58. F09E8.3 msh-5 2136 7.556 0.950 0.953 0.873 0.953 0.928 0.982 0.984 0.933 MutS protein homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q19272]
59. R05D11.5 R05D11.5 2074 7.556 0.936 0.933 0.915 0.933 0.938 0.981 0.960 0.960
60. F58D5.1 hrp-2 17211 7.554 0.925 0.957 0.887 0.957 0.916 0.986 0.964 0.962 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
61. C15H11.9 rrbs-1 9177 7.554 0.922 0.956 0.860 0.956 0.982 0.960 0.969 0.949 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
62. D2030.6 prg-1 26751 7.553 0.957 0.966 0.889 0.966 0.930 0.959 0.957 0.929 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
63. F58E10.3 ddx-17 15107 7.552 0.928 0.971 0.894 0.971 0.934 0.949 0.930 0.975 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
64. F28B3.7 him-1 18274 7.551 0.962 0.977 0.923 0.977 0.914 0.945 0.936 0.917 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
65. Y105E8B.3 riok-2 5531 7.551 0.949 0.962 0.898 0.962 0.963 0.961 0.945 0.911 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
66. T12E12.2 cec-6 4758 7.551 0.923 0.974 0.901 0.974 0.940 0.965 0.956 0.918 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
67. ZK856.13 tftc-3 2960 7.55 0.916 0.961 0.880 0.961 0.969 0.974 0.970 0.919 Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_505626]
68. Y39G10AR.7 ekl-7 7072 7.55 0.945 0.964 0.858 0.964 0.946 0.968 0.940 0.965
69. C43E11.1 acin-1 7781 7.549 0.969 0.971 0.896 0.971 0.905 0.957 0.914 0.966 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
70. F55H2.6 clu-1 21404 7.548 0.884 0.945 0.876 0.945 0.960 0.984 0.970 0.984 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
71. F32E10.6 cec-5 10643 7.548 0.941 0.955 0.882 0.955 0.941 0.977 0.962 0.935 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
72. F29C4.6 tut-1 5637 7.548 0.900 0.965 0.864 0.965 0.956 0.960 0.988 0.950 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
73. W02B12.3 rsp-1 9235 7.547 0.926 0.954 0.908 0.954 0.929 0.975 0.953 0.948 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
74. C07E3.2 pro-2 4193 7.547 0.917 0.950 0.893 0.950 0.969 0.961 0.946 0.961 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
75. Y37D8A.9 mrg-1 14369 7.546 0.921 0.959 0.834 0.959 0.976 0.980 0.964 0.953 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
76. C27B7.1 spr-2 14958 7.546 0.906 0.964 0.902 0.964 0.938 0.951 0.960 0.961 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
77. K05C4.7 K05C4.7 3429 7.545 0.917 0.933 0.915 0.933 0.952 0.987 0.959 0.949 Armadillo repeat-containing protein 1 [Source:RefSeq peptide;Acc:NP_493565]
78. F28B3.8 imb-1 7515 7.544 0.946 0.965 0.890 0.965 0.923 0.942 0.965 0.948 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
79. ZC434.5 ears-1 4725 7.544 0.939 0.951 0.891 0.951 0.964 0.971 0.960 0.917 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
80. F28C6.6 suf-1 3642 7.541 0.920 0.967 0.904 0.967 0.963 0.952 0.958 0.910 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
81. F45E12.2 brf-1 4667 7.541 0.958 0.957 0.900 0.957 0.976 0.976 0.943 0.874 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
82. R13A5.12 lpd-7 10476 7.54 0.897 0.957 0.871 0.957 0.971 0.960 0.977 0.950 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
83. K08F4.2 gtbp-1 25222 7.539 0.919 0.977 0.871 0.977 0.953 0.964 0.913 0.965 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
84. Y38E10A.6 ceh-100 5505 7.539 0.930 0.944 0.910 0.944 0.977 0.993 0.954 0.887 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
85. F59E12.2 zyg-1 1718 7.538 0.932 0.940 0.912 0.940 0.960 0.973 0.955 0.926 Probable serine/threonine-protein kinase zyg-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GT24]
86. F56D12.5 vig-1 42594 7.538 0.864 0.964 0.860 0.964 0.943 0.988 0.979 0.976 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
87. K02F2.3 teg-4 3873 7.536 0.929 0.966 0.877 0.966 0.919 0.966 0.952 0.961 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
88. T04H1.4 rad-50 2736 7.536 0.959 0.953 0.883 0.953 0.897 0.973 0.979 0.939 DNA repair protein rad-50 [Source:UniProtKB/Swiss-Prot;Acc:O44199]
89. T19A6.2 ngp-1 5884 7.535 0.923 0.965 0.881 0.965 0.956 0.968 0.923 0.954 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
90. F55A12.8 nath-10 4253 7.534 0.931 0.962 0.902 0.962 0.967 0.941 0.919 0.950 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
91. T25G3.4 T25G3.4 9394 7.534 0.927 0.966 0.862 0.966 0.966 0.962 0.953 0.932 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
92. ZK686.4 snu-23 9040 7.534 0.926 0.946 0.895 0.946 0.934 0.969 0.963 0.955 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
93. F36A2.1 cids-2 4551 7.532 0.926 0.968 0.893 0.968 0.929 0.958 0.975 0.915 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
94. C27H6.2 ruvb-1 6291 7.531 0.925 0.974 0.903 0.974 0.927 0.951 0.930 0.947 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
95. F33H2.5 pole-1 3734 7.53 0.909 0.932 0.922 0.932 0.932 0.978 0.976 0.949 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
96. R144.7 larp-1 24669 7.53 0.918 0.961 0.880 0.961 0.940 0.962 0.952 0.956 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
97. F22D6.3 nars-1 18624 7.529 0.895 0.969 0.930 0.969 0.932 0.972 0.917 0.945 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
98. ZK1251.9 dcaf-1 10926 7.529 0.953 0.959 0.850 0.959 0.970 0.971 0.951 0.916 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
99. K09H9.6 lpd-6 5459 7.529 0.939 0.967 0.886 0.967 0.980 0.943 0.975 0.872 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
100. H12I13.4 fbf-1 5587 7.528 0.922 0.957 0.889 0.957 0.969 0.978 0.961 0.895 Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]

There are 1864 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA