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Results for F52B5.6

Gene ID Gene Name Reads Transcripts Annotation
F52B5.6 rpl-25.2 100512 F52B5.6.1, F52B5.6.2, F52B5.6.3, F52B5.6.4 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]

Genes with expression patterns similar to F52B5.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F52B5.6 rpl-25.2 100512 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
2. R13A5.8 rpl-9 140064 7.738 0.970 0.984 0.975 0.984 0.875 0.986 0.986 0.978 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
3. C23G10.3 rps-3 69779 7.719 0.973 0.974 0.963 0.974 0.943 0.945 0.987 0.960 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
4. F28D1.7 rps-23 93860 7.705 0.965 0.977 0.971 0.977 0.884 0.986 0.991 0.954 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
5. F25H2.10 rla-0 79986 7.703 0.975 0.958 0.956 0.958 0.918 0.985 0.980 0.973 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
6. F54C9.5 rpl-5 99313 7.701 0.986 0.966 0.969 0.966 0.987 0.891 0.977 0.959 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
7. T05G5.10 iff-1 42569 7.699 0.973 0.965 0.951 0.965 0.939 0.957 0.981 0.968 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
8. Y37E3.7 rla-1 55876 7.685 0.970 0.970 0.974 0.970 0.894 0.940 0.991 0.976 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
9. B0513.3 rpl-29 102432 7.682 0.957 0.960 0.951 0.960 0.928 0.987 0.985 0.954 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
10. M01F1.2 rpl-16 99563 7.671 0.980 0.970 0.960 0.970 0.853 0.986 0.983 0.969 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
11. B0336.9 swp-1 52442 7.664 0.971 0.979 0.974 0.979 0.926 0.896 0.983 0.956 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
12. C56C10.8 icd-1 89788 7.663 0.971 0.968 0.986 0.968 0.888 0.926 0.970 0.986 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
13. Y18D10A.19 fkb-2 48128 7.661 0.981 0.955 0.949 0.955 0.887 0.960 0.983 0.991 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
14. K04D7.1 rack-1 48949 7.66 0.975 0.983 0.974 0.983 0.881 0.908 0.987 0.969 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
15. R151.3 rpl-6 89081 7.66 0.973 0.968 0.970 0.968 0.851 0.991 0.981 0.958 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
16. F17C11.9 eef-1G 37911 7.657 0.976 0.982 0.955 0.982 0.892 0.930 0.984 0.956 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
17. Y65B4BR.5 icd-2 58321 7.65 0.973 0.981 0.955 0.981 0.909 0.899 0.975 0.977 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
18. JC8.3 rpl-12 52728 7.649 0.972 0.971 0.948 0.971 0.907 0.925 0.982 0.973 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
19. R11D1.8 rpl-28 62242 7.649 0.967 0.969 0.977 0.969 0.923 0.896 0.982 0.966 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
20. C16A3.9 rps-13 82192 7.648 0.968 0.952 0.941 0.952 0.907 0.982 0.979 0.967 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
21. Y48B6A.2 rpl-43 104489 7.643 0.973 0.973 0.973 0.973 0.927 0.888 0.987 0.949 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
22. F53A3.3 rps-22 81093 7.637 0.979 0.975 0.965 0.975 0.919 0.863 0.980 0.981 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
23. C09D4.5 rpl-19 56944 7.633 0.977 0.979 0.974 0.979 0.882 0.894 0.984 0.964 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
24. T05E11.1 rps-5 79298 7.632 0.983 0.974 0.973 0.974 0.872 0.916 0.984 0.956 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
25. C32E8.2 rpl-13 70096 7.632 0.979 0.976 0.969 0.976 0.885 0.904 0.987 0.956 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
26. F37C12.11 rps-21 62646 7.63 0.971 0.968 0.963 0.968 0.898 0.905 0.989 0.968 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
27. Y113G7B.17 prmt-1 43709 7.623 0.977 0.974 0.965 0.974 0.895 0.962 0.934 0.942 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
28. C06B8.8 rpl-38 109834 7.619 0.956 0.967 0.964 0.967 0.976 0.890 0.972 0.927 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
29. F56D12.5 vig-1 42594 7.612 0.965 0.958 0.965 0.958 0.912 0.918 0.978 0.958 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
30. K04D7.2 mspn-1 48187 7.604 0.976 0.984 0.963 0.984 0.888 0.864 0.983 0.962 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
31. Y37E3.10 Y37E3.10 6492 7.603 0.970 0.931 0.968 0.931 0.874 0.986 0.974 0.969
32. D1007.12 rpl-24.1 73724 7.602 0.978 0.960 0.969 0.960 0.929 0.878 0.982 0.946 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
33. T21C9.12 scpl-4 14723 7.6 0.961 0.971 0.956 0.971 0.907 0.886 0.974 0.974 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
34. F56F3.5 rps-1 85503 7.599 0.976 0.982 0.964 0.982 0.891 0.862 0.989 0.953 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
35. F37C12.4 rpl-36 126906 7.599 0.953 0.949 0.959 0.949 0.889 0.980 0.974 0.946 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
36. T21G5.3 glh-1 16470 7.594 0.966 0.964 0.959 0.964 0.899 0.919 0.984 0.939 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
37. Y41D4B.5 rps-28 46003 7.593 0.967 0.956 0.963 0.956 0.912 0.900 0.974 0.965 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
38. C53H9.1 rpl-27 59496 7.591 0.974 0.965 0.951 0.965 0.908 0.897 0.981 0.950 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
39. C27A2.2 rpl-22 63091 7.585 0.972 0.944 0.966 0.944 0.887 0.926 0.986 0.960 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
40. ZK1010.1 ubq-2 87842 7.584 0.971 0.981 0.977 0.981 0.855 0.892 0.970 0.957 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
41. H06I04.4 ubl-1 57718 7.584 0.973 0.961 0.952 0.961 0.862 0.949 0.979 0.947 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
42. T07A9.9 nog-1 19728 7.582 0.946 0.965 0.960 0.965 0.879 0.940 0.979 0.948 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
43. F25H5.4 eef-2 34846 7.581 0.943 0.972 0.947 0.972 0.892 0.931 0.963 0.961 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
44. T05F1.3 rps-19 88407 7.578 0.977 0.971 0.964 0.971 0.901 0.855 0.979 0.960 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
45. Y43B11AR.4 rps-4 76546 7.577 0.968 0.970 0.932 0.970 0.917 0.906 0.963 0.951 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
46. C53D5.6 imb-3 28921 7.576 0.951 0.974 0.936 0.974 0.883 0.934 0.988 0.936 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
47. D2096.8 nap-1 59459 7.576 0.985 0.976 0.976 0.976 0.909 0.940 0.881 0.933 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
48. DY3.1 tin-13 5225 7.57 0.947 0.940 0.947 0.940 0.918 0.921 0.986 0.971 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
49. F53G12.10 rpl-7 78552 7.567 0.969 0.974 0.949 0.974 0.894 0.897 0.967 0.943 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
50. C06E7.1 sams-3 26921 7.562 0.958 0.964 0.937 0.964 0.876 0.929 0.978 0.956 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
51. F28C6.7 rpl-26 113192 7.559 0.981 0.962 0.968 0.962 0.755 0.984 0.982 0.965 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
52. K07A12.7 mrps-15 6325 7.555 0.955 0.957 0.899 0.957 0.935 0.925 0.972 0.955 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
53. K08F11.3 cif-1 10218 7.551 0.955 0.961 0.941 0.961 0.895 0.889 0.994 0.955 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
54. B0464.1 dars-1 12331 7.548 0.953 0.955 0.936 0.955 0.891 0.922 0.981 0.955 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
55. C03D6.8 rpl-24.2 5932 7.547 0.982 0.962 0.922 0.962 0.920 0.897 0.942 0.960 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
56. ZK652.4 rpl-35 89991 7.542 0.979 0.956 0.955 0.956 0.844 0.895 0.988 0.969 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
57. Y24D9A.4 rpl-7A 176639 7.537 0.888 0.972 0.959 0.972 0.900 0.903 0.968 0.975 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
58. T08B2.9 fars-1 12650 7.536 0.942 0.972 0.918 0.972 0.947 0.846 0.984 0.955 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
59. F37C12.9 rps-14 106692 7.536 0.956 0.960 0.962 0.960 0.856 0.892 0.991 0.959 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
60. F57B9.5 byn-1 58236 7.524 0.959 0.975 0.965 0.975 0.875 0.846 0.956 0.973 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
61. B0412.4 rps-29 35461 7.521 0.941 0.964 0.956 0.964 0.890 0.889 0.970 0.947 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
62. ZC434.5 ears-1 4725 7.519 0.899 0.947 0.944 0.947 0.950 0.918 0.955 0.959 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
63. W09C5.7 W09C5.7 2359 7.519 0.965 0.894 0.966 0.894 0.906 0.936 0.980 0.978
64. W01B11.3 nol-5 23544 7.518 0.955 0.962 0.958 0.962 0.838 0.981 0.919 0.943 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
65. C34E10.5 prmt-5 12277 7.516 0.942 0.972 0.931 0.972 0.914 0.868 0.972 0.945 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
66. R144.7 larp-1 24669 7.514 0.965 0.958 0.890 0.958 0.902 0.916 0.973 0.952 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
67. C26D10.2 hel-1 28697 7.512 0.960 0.976 0.947 0.976 0.836 0.855 0.990 0.972 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
68. Y48G8AL.8 rpl-17 77686 7.51 0.961 0.974 0.962 0.974 0.745 0.985 0.953 0.956 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
69. Y46G5A.4 snrp-200 13827 7.509 0.909 0.967 0.897 0.967 0.910 0.905 0.984 0.970 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
70. T02G5.9 kars-1 9763 7.508 0.909 0.967 0.938 0.967 0.929 0.863 0.972 0.963 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
71. C26F1.9 rpl-39 51628 7.504 0.920 0.935 0.940 0.935 0.912 0.943 0.974 0.945 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
72. R13F6.10 cra-1 11610 7.503 0.951 0.953 0.934 0.953 0.898 0.908 0.959 0.947 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
73. B0261.4 mrpl-47 8210 7.502 0.963 0.955 0.955 0.955 0.916 0.875 0.964 0.919 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
74. F42A6.7 hrp-1 28201 7.5 0.913 0.936 0.902 0.936 0.923 0.928 0.979 0.983 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
75. B0393.1 rps-0 89081 7.498 0.971 0.965 0.951 0.965 0.870 0.828 0.972 0.976 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
76. D2013.7 eif-3.F 21004 7.497 0.949 0.971 0.927 0.971 0.913 0.835 0.950 0.981 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
77. F26D10.3 hsp-1 98277 7.497 0.965 0.976 0.977 0.976 0.850 0.879 0.917 0.957 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
78. F25H2.11 tct-1 41796 7.494 0.965 0.968 0.959 0.968 0.895 0.850 0.947 0.942 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
79. Y40B1B.5 eif-3.J 15061 7.491 0.934 0.978 0.934 0.978 0.876 0.853 0.967 0.971 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
80. C26F1.4 rps-30 77534 7.491 0.971 0.953 0.936 0.953 0.883 0.857 0.978 0.960 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
81. T01C3.7 fib-1 23572 7.489 0.978 0.955 0.967 0.955 0.867 0.935 0.913 0.919 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
82. C54C6.1 rpl-37 24379 7.489 0.933 0.943 0.947 0.943 0.915 0.868 0.973 0.967 60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622]
83. C27H6.2 ruvb-1 6291 7.488 0.943 0.961 0.904 0.961 0.888 0.937 0.917 0.977 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
84. Y54E10A.9 vbh-1 28746 7.488 0.949 0.967 0.945 0.967 0.825 0.909 0.960 0.966 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
85. F59A2.3 cri-3 15077 7.487 0.949 0.967 0.956 0.967 0.935 0.857 0.895 0.961 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
86. T08B2.10 rps-17 38071 7.487 0.940 0.948 0.937 0.948 0.913 0.887 0.959 0.955 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
87. F56B3.12 skr-18 6534 7.486 0.935 0.958 0.953 0.958 0.917 0.828 0.972 0.965 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
88. C09H10.2 rpl-41 94057 7.485 0.949 0.921 0.936 0.921 0.903 0.979 0.979 0.897 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
89. C37A2.8 C37A2.8 3887 7.485 0.980 0.907 0.960 0.907 0.918 0.896 0.976 0.941
90. T03D8.2 mrps-12 8253 7.484 0.951 0.972 0.962 0.972 0.907 0.844 0.940 0.936 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
91. T20H4.3 pars-1 8167 7.483 0.934 0.967 0.937 0.967 0.867 0.867 0.965 0.979 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
92. R13A5.12 lpd-7 10476 7.483 0.945 0.972 0.966 0.972 0.909 0.844 0.955 0.920 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
93. T22D1.10 ruvb-2 6505 7.481 0.965 0.954 0.898 0.954 0.859 0.941 0.962 0.948 RuvB-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH2]
94. Y62E10A.1 rla-2 59665 7.479 0.964 0.970 0.959 0.970 0.901 0.811 0.971 0.933 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
95. D1007.6 rps-10 142465 7.478 0.969 0.967 0.962 0.967 0.728 0.968 0.982 0.935 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
96. F36A4.7 ama-1 13620 7.478 0.927 0.962 0.928 0.962 0.866 0.909 0.945 0.979 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
97. F45H11.2 ned-8 13247 7.478 0.928 0.943 0.965 0.943 0.863 0.893 0.976 0.967 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
98. Y53C12B.3 nos-3 20231 7.477 0.956 0.959 0.893 0.959 0.914 0.908 0.951 0.937 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
99. F58D5.1 hrp-2 17211 7.477 0.942 0.950 0.903 0.950 0.896 0.897 0.960 0.979 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
100. T27F7.3 eif-1 28176 7.477 0.953 0.954 0.947 0.954 0.892 0.874 0.951 0.952 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA