C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for W09C5.6

Gene ID Gene Name Reads Transcripts Annotation
W09C5.6 rpl-31 156225 W09C5.6a, W09C5.6b.1, W09C5.6b.2, W09C5.6b.3, W09C5.6b.4, W09C5.6b.5 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]

Genes with expression patterns similar to W09C5.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. W09C5.6 rpl-31 156225 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
2. Y71F9AL.13 rpl-1 143484 7.746 0.897 0.981 0.969 0.981 0.944 0.995 0.993 0.986 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
3. Y48B6A.2 rpl-43 104489 7.709 0.905 0.980 0.987 0.980 0.969 0.913 0.991 0.984 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
4. F56F3.5 rps-1 85503 7.684 0.880 0.985 0.989 0.985 0.927 0.933 0.990 0.995 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
5. C53H9.1 rpl-27 59496 7.681 0.916 0.972 0.977 0.972 0.934 0.943 0.984 0.983 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
6. B0336.9 swp-1 52442 7.665 0.874 0.976 0.977 0.976 0.937 0.951 0.984 0.990 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
7. T05F1.3 rps-19 88407 7.654 0.892 0.979 0.977 0.979 0.911 0.943 0.982 0.991 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
8. C32E8.2 rpl-13 70096 7.654 0.886 0.978 0.986 0.978 0.907 0.943 0.988 0.988 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
9. F40F11.1 rps-11 152960 7.649 0.979 0.967 0.964 0.967 0.908 0.891 0.994 0.979 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
10. Y105E8A.16 rps-20 146067 7.649 0.886 0.985 0.974 0.985 0.907 0.947 0.977 0.988 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
11. ZC434.2 rps-7 142021 7.64 0.869 0.975 0.973 0.975 0.944 0.932 0.991 0.981 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
12. F53A3.3 rps-22 81093 7.636 0.874 0.981 0.979 0.981 0.901 0.953 0.979 0.988 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
13. C09D4.5 rpl-19 56944 7.626 0.909 0.976 0.972 0.976 0.875 0.948 0.981 0.989 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
14. M01F1.2 rpl-16 99563 7.623 0.899 0.986 0.983 0.986 0.931 0.868 0.981 0.989 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
15. ZK1010.1 ubq-2 87842 7.621 0.857 0.983 0.980 0.983 0.921 0.937 0.974 0.986 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
16. D1007.12 rpl-24.1 73724 7.62 0.881 0.965 0.978 0.965 0.923 0.935 0.982 0.991 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
17. F39B2.6 rps-26 137659 7.618 0.841 0.980 0.980 0.980 0.940 0.920 0.993 0.984 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
18. T05E11.1 rps-5 79298 7.616 0.877 0.961 0.981 0.961 0.927 0.939 0.982 0.988 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
19. ZK652.4 rpl-35 89991 7.613 0.887 0.971 0.969 0.971 0.924 0.913 0.993 0.985 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
20. Y71A12B.1 rps-6 123721 7.613 0.935 0.984 0.973 0.984 0.866 0.901 0.992 0.978 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
21. R11D1.8 rpl-28 62242 7.612 0.875 0.973 0.976 0.973 0.934 0.924 0.972 0.985 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
22. F53G12.10 rpl-7 78552 7.609 0.878 0.981 0.954 0.981 0.932 0.933 0.960 0.990 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
23. C49H3.11 rps-2 152343 7.606 0.883 0.980 0.888 0.980 0.950 0.954 0.989 0.982 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
24. F54C9.5 rpl-5 99313 7.605 0.901 0.987 0.966 0.987 0.886 0.914 0.976 0.988 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
25. F37C12.9 rps-14 106692 7.604 0.874 0.970 0.957 0.970 0.936 0.908 0.992 0.997 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
26. F28C6.7 rpl-26 113192 7.6 0.896 0.979 0.989 0.979 0.898 0.878 0.989 0.992 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
27. F37C12.11 rps-21 62646 7.598 0.849 0.962 0.975 0.962 0.938 0.942 0.987 0.983 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
28. K04D7.1 rack-1 48949 7.594 0.877 0.960 0.970 0.960 0.910 0.948 0.981 0.988 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
29. F28D1.7 rps-23 93860 7.589 0.884 0.976 0.986 0.976 0.932 0.856 0.988 0.991 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
30. K02B2.5 rps-25 118421 7.584 0.880 0.973 0.975 0.973 0.874 0.925 0.995 0.989 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
31. Y62E10A.1 rla-2 59665 7.582 0.874 0.969 0.975 0.969 0.909 0.917 0.983 0.986 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
32. F56E10.4 rps-27 162794 7.575 0.984 0.977 0.970 0.977 0.878 0.904 0.987 0.898 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
33. K04D7.2 mspn-1 48187 7.574 0.863 0.973 0.952 0.973 0.920 0.930 0.971 0.992 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
34. C14B9.7 rpl-21 118616 7.572 0.842 0.973 0.979 0.973 0.886 0.947 0.988 0.984 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
35. C06B8.8 rpl-38 109834 7.565 0.869 0.980 0.981 0.980 0.847 0.946 0.984 0.978 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
36. R13A5.8 rpl-9 140064 7.563 0.875 0.979 0.976 0.979 0.897 0.884 0.988 0.985 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
37. E04A4.7 cyc-2.1 233997 7.56 0.850 0.971 0.972 0.971 0.950 0.990 0.891 0.965 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
38. F42C5.8 rps-8 171967 7.559 0.855 0.976 0.949 0.976 0.830 0.997 0.986 0.990 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
39. F37C12.4 rpl-36 126906 7.557 0.849 0.970 0.950 0.970 0.995 0.877 0.969 0.977 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
40. F40F8.10 rps-9 105818 7.556 0.832 0.970 0.984 0.970 0.908 0.911 0.993 0.988 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
41. JC8.3 rpl-12 52728 7.554 0.874 0.965 0.964 0.965 0.905 0.909 0.986 0.986 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
42. C23G10.3 rps-3 69779 7.553 0.835 0.976 0.954 0.976 0.949 0.909 0.977 0.977 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
43. C27A2.2 rpl-22 63091 7.55 0.832 0.948 0.982 0.948 0.948 0.923 0.981 0.988 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
44. R151.3 rpl-6 89081 7.548 0.878 0.978 0.978 0.978 0.921 0.844 0.985 0.986 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
45. Y43B11AR.4 rps-4 76546 7.545 0.850 0.976 0.955 0.976 0.911 0.924 0.969 0.984 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
46. B0393.1 rps-0 89081 7.544 0.884 0.972 0.949 0.972 0.912 0.897 0.972 0.986 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
47. Y41D4B.5 rps-28 46003 7.538 0.868 0.956 0.965 0.956 0.919 0.922 0.961 0.991 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
48. F13B10.2 rpl-3 171741 7.53 0.868 0.956 0.963 0.956 0.872 0.925 0.997 0.993 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
49. B0513.3 rpl-29 102432 7.526 0.845 0.968 0.960 0.968 0.953 0.852 0.990 0.990 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
50. C26F1.4 rps-30 77534 7.52 0.858 0.965 0.960 0.965 0.897 0.926 0.958 0.991 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
51. Y37E3.7 rla-1 55876 7.518 0.835 0.970 0.961 0.970 0.914 0.913 0.975 0.980 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
52. Y57G11C.16 rps-18 76576 7.518 0.854 0.969 0.960 0.969 0.902 0.948 0.931 0.985 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
53. T01C3.6 rps-16 97002 7.516 0.883 0.975 0.964 0.975 0.857 0.881 0.992 0.989 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
54. T24B8.1 rpl-32 67285 7.514 0.845 0.981 0.989 0.981 0.901 0.872 0.963 0.982 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
55. F17C11.9 eef-1G 37911 7.511 0.845 0.966 0.959 0.966 0.866 0.944 0.990 0.975 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
56. B0250.1 rpl-2 100592 7.509 0.843 0.981 0.968 0.981 0.943 0.835 0.971 0.987 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
57. C26F1.9 rpl-39 51628 7.506 0.860 0.962 0.956 0.962 0.891 0.939 0.965 0.971 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
58. B0041.4 rpl-4 161951 7.495 0.824 0.979 0.976 0.979 0.881 0.884 0.988 0.984 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
59. C42C1.14 rpl-34 146539 7.495 0.837 0.985 0.966 0.985 0.879 0.884 0.980 0.979 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
60. F10E7.7 rpl-33 81733 7.494 0.881 0.982 0.936 0.982 0.866 0.878 0.979 0.990 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
61. H06I04.4 ubl-1 57718 7.49 0.848 0.960 0.960 0.960 0.898 0.915 0.973 0.976 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
62. D1007.6 rps-10 142465 7.489 0.874 0.979 0.983 0.979 0.787 0.913 0.981 0.993 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
63. T08B2.10 rps-17 38071 7.488 0.819 0.963 0.961 0.963 0.907 0.947 0.939 0.989 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
64. F36A2.6 rps-15 147653 7.486 0.892 0.974 0.964 0.974 0.804 0.917 0.972 0.989 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
65. Y106G6H.2 pab-1 96744 7.479 0.840 0.967 0.966 0.967 0.865 0.929 0.963 0.982 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
66. F25H2.10 rla-0 79986 7.471 0.859 0.975 0.964 0.975 0.920 0.820 0.973 0.985 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
67. F25H5.4 eef-2 34846 7.468 0.827 0.953 0.970 0.953 0.893 0.935 0.963 0.974 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
68. F25H2.11 tct-1 41796 7.466 0.853 0.955 0.960 0.955 0.891 0.935 0.934 0.983 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
69. C56C10.8 icd-1 89788 7.463 0.847 0.951 0.956 0.951 0.941 0.900 0.961 0.956 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
70. Y45F10D.12 rpl-18 104658 7.461 0.891 0.962 0.957 0.962 0.862 0.863 0.974 0.990 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
71. C37A2.8 C37A2.8 3887 7.45 0.892 0.851 0.983 0.851 0.954 0.944 0.988 0.987
72. F54H12.6 eef-1B.1 37095 7.444 0.801 0.947 0.956 0.947 0.881 0.963 0.961 0.988 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
73. F54E7.2 rps-12 229107 7.433 0.869 0.980 0.916 0.980 0.863 0.933 0.987 0.905 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
74. K11H12.2 rpl-15 96281 7.433 0.863 0.962 0.970 0.962 0.879 0.856 0.952 0.989 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
75. Y37E3.10 Y37E3.10 6492 7.433 0.908 0.909 0.975 0.909 0.953 0.820 0.968 0.991
76. C09H10.2 rpl-41 94057 7.426 0.838 0.945 0.951 0.945 0.944 0.853 0.976 0.974 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
77. C16A3.9 rps-13 82192 7.424 0.863 0.964 0.948 0.964 0.919 0.808 0.968 0.990 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
78. Y39A1C.3 cey-4 50694 7.42 0.817 0.953 0.964 0.953 0.864 0.949 0.941 0.979 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
79. Y48G8AL.8 rpl-17 77686 7.417 0.841 0.974 0.964 0.974 0.887 0.835 0.952 0.990 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
80. Y24D9A.4 rpl-7A 176639 7.408 0.730 0.977 0.950 0.977 0.878 0.923 0.986 0.987 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
81. F52B5.6 rpl-25.2 100512 7.406 0.887 0.966 0.955 0.966 0.896 0.807 0.979 0.950 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
82. Y65B4BR.5 icd-2 58321 7.401 0.862 0.953 0.917 0.953 0.932 0.888 0.958 0.938 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
83. Y75B12B.2 cyn-7 98281 7.393 0.872 0.950 0.950 0.950 0.929 0.888 0.909 0.945 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
84. B0412.4 rps-29 35461 7.378 0.825 0.946 0.931 0.946 0.893 0.890 0.964 0.983 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
85. Y37E3.9 phb-1 29211 7.376 0.885 0.932 0.935 0.932 0.896 0.916 0.923 0.957 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
86. Y22D7AL.5 hsp-60 42542 7.372 0.852 0.927 0.931 0.927 0.924 0.909 0.955 0.947 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
87. T06G6.9 pfd-3 10945 7.369 0.831 0.950 0.922 0.950 0.932 0.927 0.924 0.933 Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
88. T27F7.3 eif-1 28176 7.361 0.881 0.929 0.929 0.929 0.877 0.922 0.932 0.962 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
89. D2013.7 eif-3.F 21004 7.354 0.860 0.937 0.901 0.937 0.873 0.931 0.941 0.974 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
90. Y18D10A.19 fkb-2 48128 7.352 0.882 0.922 0.929 0.922 0.908 0.880 0.976 0.933 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
91. C04F12.4 rpl-14 182505 7.35 0.717 0.977 0.873 0.977 0.951 0.998 0.990 0.867 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
92. R74.1 lars-1 8467 7.348 0.839 0.947 0.927 0.947 0.885 0.932 0.903 0.968 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
93. Y106G6H.3 rpl-30 54860 7.346 0.788 0.973 0.885 0.973 0.894 0.907 0.952 0.974 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492728]
94. C54C6.1 rpl-37 24379 7.346 0.771 0.941 0.947 0.941 0.895 0.930 0.947 0.974 60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622]
95. F26D10.3 hsp-1 98277 7.345 0.837 0.954 0.927 0.954 0.871 0.897 0.949 0.956 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
96. T24H7.1 phb-2 28775 7.339 0.858 0.965 0.938 0.965 0.902 0.838 0.926 0.947 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
97. B0464.1 dars-1 12331 7.332 0.862 0.933 0.935 0.933 0.847 0.922 0.970 0.930 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
98. B0261.4 mrpl-47 8210 7.324 0.873 0.936 0.911 0.936 0.874 0.905 0.967 0.922 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
99. H21P03.1 mbf-1 25586 7.321 0.826 0.939 0.927 0.939 0.848 0.950 0.937 0.955 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
100. T08B2.9 fars-1 12650 7.318 0.810 0.936 0.890 0.936 0.925 0.900 0.973 0.948 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]

There are 383 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA