C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y48E1C.2

Gene ID Gene Name Reads Transcripts Annotation
Y48E1C.2 Y48E1C.2 0 Y48E1C.2

Genes with expression patterns similar to Y48E1C.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y48E1C.2 Y48E1C.2 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. C02B10.5 C02B10.5 9171 5.804 0.981 - 0.957 - 0.957 0.993 0.962 0.954
3. K02F3.11 rnp-5 6205 5.792 0.981 - 0.938 - 0.985 0.985 0.958 0.945 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
4. F32H2.4 thoc-3 3861 5.776 0.963 - 0.961 - 0.988 0.975 0.948 0.941 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
5. F22D6.3 nars-1 18624 5.775 0.970 - 0.937 - 0.985 0.979 0.948 0.956 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
6. C07A9.5 C07A9.5 0 5.767 0.978 - 0.965 - 0.977 0.974 0.949 0.924 Uncharacterized calcium-binding protein C07A9.5 [Source:UniProtKB/Swiss-Prot;Acc:P34316]
7. F23F1.1 nfyc-1 9983 5.767 0.980 - 0.960 - 0.977 0.974 0.938 0.938 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
8. Y47G6A.20 rnp-6 5542 5.767 0.981 - 0.961 - 0.975 0.989 0.918 0.943 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
9. C08B11.5 sap-49 10553 5.766 0.969 - 0.942 - 0.988 0.985 0.938 0.944 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
10. T05H4.14 gad-1 7979 5.765 0.970 - 0.932 - 0.980 0.965 0.957 0.961 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
11. W02B12.3 rsp-1 9235 5.764 0.983 - 0.962 - 0.962 0.968 0.948 0.941 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
12. B0035.3 B0035.3 4118 5.763 0.975 - 0.971 - 0.963 0.979 0.932 0.943
13. Y54E2A.3 tac-1 6308 5.759 0.970 - 0.945 - 0.988 0.971 0.929 0.956 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
14. C15F1.4 ppp-1 1774 5.758 0.951 - 0.918 - 0.978 0.984 0.959 0.968 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
15. Y34D9A.1 mrpl-38 5291 5.758 0.965 - 0.950 - 0.976 0.980 0.937 0.950 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
16. F44E2.9 F44E2.9 1289 5.755 0.978 - 0.960 - 0.976 0.983 0.935 0.923
17. F42A6.7 hrp-1 28201 5.754 0.981 - 0.965 - 0.985 0.964 0.922 0.937 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
18. Y56A3A.17 npp-16 5391 5.75 0.979 - 0.959 - 0.978 0.970 0.920 0.944 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
19. F22B5.9 fars-3 7209 5.749 0.947 - 0.949 - 0.980 0.977 0.938 0.958 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
20. K08F11.3 cif-1 10218 5.748 0.964 - 0.937 - 0.984 0.974 0.944 0.945 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
21. C17E4.10 C17E4.10 7034 5.745 0.961 - 0.948 - 0.959 0.983 0.957 0.937
22. T08B2.9 fars-1 12650 5.745 0.942 - 0.961 - 0.974 0.971 0.939 0.958 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
23. F52C9.7 mog-3 9880 5.745 0.975 - 0.960 - 0.968 0.966 0.941 0.935 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
24. T01E8.6 mrps-14 9328 5.743 0.943 - 0.944 - 0.979 0.973 0.944 0.960 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
25. C33H5.12 rsp-6 23342 5.743 0.976 - 0.959 - 0.975 0.949 0.943 0.941 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
26. F32E10.6 cec-5 10643 5.742 0.979 - 0.956 - 0.969 0.977 0.936 0.925 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
27. C18F10.2 C18F10.2 307 5.741 0.973 - 0.914 - 0.978 0.980 0.954 0.942
28. Y39G10AR.7 ekl-7 7072 5.74 0.938 - 0.958 - 0.987 0.969 0.940 0.948
29. Y111B2A.18 rsp-3 43731 5.739 0.986 - 0.956 - 0.978 0.947 0.923 0.949 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
30. T27A10.2 T27A10.2 0 5.738 0.979 - 0.931 - 0.984 0.972 0.948 0.924
31. R02F11.1 R02F11.1 0 5.735 0.935 - 0.946 - 0.984 0.975 0.934 0.961
32. C25D7.8 otub-1 7941 5.735 0.976 - 0.955 - 0.977 0.964 0.905 0.958 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
33. C08B11.6 arp-6 4646 5.735 0.979 - 0.949 - 0.966 0.968 0.930 0.943 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
34. ZK742.1 xpo-1 20741 5.734 0.969 - 0.974 - 0.976 0.957 0.888 0.970 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
35. F26B1.5 F26B1.5 212 5.733 0.961 - 0.956 - 0.981 0.971 0.931 0.933 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_001040654]
36. T21B10.4 T21B10.4 11648 5.733 0.976 - 0.962 - 0.976 0.971 0.923 0.925
37. Y73F8A.34 tag-349 7966 5.733 0.975 - 0.953 - 0.961 0.982 0.943 0.919
38. Y54E5A.4 npp-4 6288 5.732 0.965 - 0.969 - 0.971 0.988 0.892 0.947 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
39. Y16E11A.2 Y16E11A.2 0 5.731 0.955 - 0.954 - 0.985 0.969 0.933 0.935
40. F28H1.3 aars-2 13537 5.731 0.974 - 0.960 - 0.973 0.961 0.899 0.964 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
41. Y110A7A.19 let-630 3830 5.73 0.950 - 0.947 - 0.982 0.945 0.955 0.951
42. F54C4.1 mrpl-40 2843 5.729 0.952 - 0.926 - 0.987 0.953 0.945 0.966 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497138]
43. T09A5.14 T09A5.14 0 5.729 0.958 - 0.949 - 0.980 0.989 0.929 0.924
44. Y71F9B.16 dnj-30 4262 5.728 0.968 - 0.954 - 0.966 0.984 0.932 0.924 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
45. C28H8.9 dpff-1 8684 5.728 0.966 - 0.944 - 0.970 0.969 0.940 0.939 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
46. T10F2.4 prp-19 11298 5.728 0.974 - 0.952 - 0.979 0.960 0.912 0.951 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
47. F26F4.10 rars-1 9971 5.726 0.963 - 0.955 - 0.976 0.982 0.931 0.919 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
48. D1054.14 prp-38 6504 5.725 0.962 - 0.950 - 0.971 0.991 0.909 0.942 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
49. W05F2.7 W05F2.7 1179 5.724 0.975 - 0.964 - 0.982 0.964 0.953 0.886
50. F37E3.1 ncbp-1 5649 5.724 0.968 - 0.952 - 0.940 0.974 0.940 0.950 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
51. C52E4.6 cyl-1 6405 5.724 0.966 - 0.924 - 0.984 0.982 0.910 0.958 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
52. C30B5.6 C30B5.6 0 5.723 0.953 - 0.947 - 0.979 0.978 0.939 0.927
53. K11D12.2 pqn-51 15951 5.723 0.975 - 0.963 - 0.980 0.983 0.903 0.919 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
54. T19B4.2 npp-7 13073 5.723 0.972 - 0.964 - 0.971 0.974 0.885 0.957 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
55. T17E9.2 nmt-1 8017 5.723 0.947 - 0.954 - 0.960 0.982 0.928 0.952 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
56. T13H5.6 T13H5.6 89 5.722 0.969 - 0.944 - 0.969 0.979 0.923 0.938
57. T23H2.1 npp-12 12425 5.722 0.976 - 0.958 - 0.955 0.966 0.915 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
58. K07C5.9 K07C5.9 266 5.722 0.944 - 0.948 - 0.974 0.974 0.934 0.948
59. K08D10.3 rnp-3 3872 5.722 0.967 - 0.945 - 0.948 0.987 0.916 0.959 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500505]
60. F57B9.7 flap-1 5377 5.721 0.969 - 0.942 - 0.969 0.972 0.948 0.921 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
61. C36B1.3 rpb-3 4442 5.721 0.954 - 0.937 - 0.985 0.983 0.923 0.939 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
62. K01G5.4 ran-1 32379 5.721 0.985 - 0.944 - 0.972 0.973 0.901 0.946 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
63. F28B3.8 imb-1 7515 5.72 0.955 - 0.954 - 0.968 0.983 0.936 0.924 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
64. Y40B1B.5 eif-3.J 15061 5.72 0.970 - 0.957 - 0.972 0.975 0.907 0.939 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
65. R10D12.15 R10D12.15 0 5.72 0.968 - 0.965 - 0.972 0.962 0.895 0.958
66. Y38A8.3 ulp-2 7403 5.72 0.961 - 0.979 - 0.978 0.980 0.876 0.946 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
67. ZK484.5 ZK484.5 14387 5.72 0.970 - 0.946 - 0.977 0.973 0.906 0.948
68. F58G1.3 F58G1.3 1826 5.719 0.974 - 0.956 - 0.979 0.969 0.920 0.921 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_496754]
69. H17B01.4 emc-1 9037 5.718 0.942 - 0.960 - 0.963 0.940 0.947 0.966 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
70. T27F2.1 skp-1 3532 5.718 0.959 - 0.953 - 0.962 0.961 0.919 0.964 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
71. T04A8.10 sel-13 3109 5.718 0.958 - 0.953 - 0.984 0.982 0.917 0.924 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
72. F28C6.6 suf-1 3642 5.718 0.943 - 0.946 - 0.964 0.978 0.950 0.937 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
73. Y17G7A.1 hmg-12 29989 5.718 0.974 - 0.959 - 0.954 0.948 0.945 0.938 HMG [Source:RefSeq peptide;Acc:NP_496544]
74. ZK686.4 snu-23 9040 5.717 0.978 - 0.933 - 0.973 0.969 0.926 0.938 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
75. C24G6.2 C24G6.2 0 5.716 0.958 - 0.973 - 0.975 0.928 0.938 0.944
76. Y65B4BL.2 deps-1 18277 5.716 0.951 - 0.958 - 0.982 0.961 0.938 0.926
77. Y71G12B.17 Y71G12B.17 2904 5.715 0.930 - 0.961 - 0.982 0.983 0.933 0.926
78. C24G6.1 syp-2 2843 5.715 0.960 - 0.910 - 0.986 0.975 0.953 0.931
79. C01G10.9 C01G10.9 0 5.715 0.957 - 0.956 - 0.979 0.976 0.901 0.946 Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q93169]
80. C43E11.1 acin-1 7781 5.714 0.941 - 0.963 - 0.973 0.973 0.953 0.911 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
81. ZK1127.4 ZK1127.4 3088 5.714 0.955 - 0.956 - 0.970 0.976 0.922 0.935 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
82. Y54E2A.2 smg-9 4494 5.714 0.908 - 0.955 - 0.980 0.973 0.955 0.943
83. T09F3.4 T09F3.4 131 5.714 0.975 - 0.955 - 0.962 0.950 0.922 0.950
84. T16G1.11 eif-3.K 14014 5.714 0.967 - 0.951 - 0.972 0.961 0.937 0.926 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
85. C34E10.5 prmt-5 12277 5.714 0.936 - 0.962 - 0.967 0.987 0.919 0.943 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
86. F28B3.7 him-1 18274 5.714 0.951 - 0.969 - 0.966 0.980 0.947 0.901 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
87. R12C12.2 ran-5 14517 5.713 0.973 - 0.970 - 0.957 0.963 0.905 0.945 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
88. D1081.8 cdc-5L 8553 5.713 0.956 - 0.956 - 0.957 0.963 0.957 0.924 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
89. Y73B6BL.33 hrpf-2 4443 5.713 0.972 - 0.961 - 0.986 0.944 0.894 0.956 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
90. F55A12.6 F55A12.6 1289 5.712 0.967 - 0.974 - 0.968 0.944 0.935 0.924
91. F36A2.1 cids-2 4551 5.712 0.971 - 0.929 - 0.971 0.956 0.922 0.963 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
92. D2007.4 mrpl-18 2880 5.712 0.948 - 0.945 - 0.969 0.964 0.936 0.950 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
93. C27B7.1 spr-2 14958 5.711 0.977 - 0.948 - 0.970 0.966 0.912 0.938 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
94. T28D9.9 T28D9.9 328 5.711 0.969 - 0.926 - 0.982 0.959 0.966 0.909
95. T14B4.3 T14B4.3 2875 5.71 0.920 - 0.964 - 0.982 0.960 0.942 0.942
96. T21D12.3 pqbp-1.1 5755 5.71 0.965 - 0.946 - 0.965 0.982 0.937 0.915 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
97. C05C8.6 hpo-9 8263 5.709 0.966 - 0.937 - 0.980 0.972 0.922 0.932
98. K12C11.2 smo-1 12784 5.709 0.986 - 0.896 - 0.974 0.964 0.948 0.941 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
99. T20G5.11 rde-4 3966 5.709 0.951 - 0.952 - 0.962 0.969 0.953 0.922 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
100. F56D2.6 ddx-15 12282 5.709 0.929 - 0.978 - 0.960 0.962 0.922 0.958 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]

There are 2359 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA