C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C15F1.4

Gene ID Gene Name Reads Transcripts Annotation
C15F1.4 ppp-1 1774 C15F1.4 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]

Genes with expression patterns similar to C15F1.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C15F1.4 ppp-1 1774 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
2. T08B2.9 fars-1 12650 7.697 0.965 0.973 0.923 0.973 0.990 0.973 0.961 0.939 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
3. Y71F9B.16 dnj-30 4262 7.691 0.965 0.960 0.954 0.960 0.966 0.967 0.967 0.952 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
4. F22D6.3 nars-1 18624 7.683 0.950 0.970 0.919 0.970 0.982 0.970 0.959 0.963 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
5. F23F1.1 nfyc-1 9983 7.68 0.952 0.961 0.948 0.961 0.966 0.968 0.968 0.956 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
6. C08B11.5 sap-49 10553 7.675 0.954 0.954 0.908 0.954 0.982 0.982 0.978 0.963 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
7. T17E9.2 nmt-1 8017 7.672 0.957 0.972 0.927 0.972 0.961 0.976 0.962 0.945 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
8. Y65B4BL.2 deps-1 18277 7.671 0.926 0.967 0.963 0.967 0.976 0.943 0.975 0.954
9. C34E10.5 prmt-5 12277 7.666 0.964 0.957 0.925 0.957 0.964 0.967 0.960 0.972 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
10. F56F3.1 ifet-1 25772 7.661 0.967 0.957 0.947 0.957 0.963 0.962 0.939 0.969 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
11. F32H2.4 thoc-3 3861 7.657 0.919 0.953 0.972 0.953 0.978 0.959 0.963 0.960 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
12. Y54E5A.4 npp-4 6288 7.654 0.972 0.952 0.950 0.952 0.972 0.971 0.934 0.951 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
13. K11D12.2 pqn-51 15951 7.653 0.975 0.959 0.940 0.959 0.979 0.980 0.917 0.944 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
14. T10F2.4 prp-19 11298 7.652 0.960 0.952 0.933 0.952 0.975 0.956 0.961 0.963 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
15. C50C3.6 prp-8 19582 7.648 0.949 0.958 0.959 0.958 0.966 0.982 0.930 0.946 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
16. C53D5.6 imb-3 28921 7.646 0.948 0.956 0.914 0.956 0.975 0.954 0.980 0.963 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
17. C26E6.4 rpb-2 7053 7.645 0.940 0.960 0.951 0.960 0.961 0.963 0.950 0.960 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
18. C08B11.6 arp-6 4646 7.642 0.962 0.952 0.937 0.952 0.953 0.960 0.957 0.969 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
19. Y17G7A.1 hmg-12 29989 7.637 0.968 0.961 0.948 0.961 0.944 0.939 0.977 0.939 HMG [Source:RefSeq peptide;Acc:NP_496544]
20. K08F11.3 cif-1 10218 7.635 0.974 0.946 0.895 0.946 0.980 0.964 0.977 0.953 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
21. C25D7.8 otub-1 7941 7.634 0.968 0.954 0.938 0.954 0.970 0.964 0.939 0.947 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
22. W02B12.3 rsp-1 9235 7.633 0.964 0.943 0.925 0.943 0.969 0.960 0.979 0.950 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
23. C02B10.5 C02B10.5 9171 7.626 0.950 0.937 0.929 0.937 0.948 0.978 0.981 0.966
24. ZK652.1 snr-5 5993 7.626 0.952 0.963 0.933 0.963 0.971 0.970 0.927 0.947 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
25. T01E8.6 mrps-14 9328 7.625 0.950 0.960 0.907 0.960 0.968 0.952 0.957 0.971 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
26. F56D1.7 daz-1 23684 7.624 0.965 0.952 0.943 0.952 0.957 0.952 0.942 0.961 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
27. Y65B4BR.5 icd-2 58321 7.622 0.945 0.957 0.910 0.957 0.981 0.975 0.969 0.928 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
28. D1054.14 prp-38 6504 7.621 0.957 0.955 0.919 0.955 0.953 0.982 0.939 0.961 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
29. C48B4.11 C48B4.11 4384 7.62 0.965 0.946 0.940 0.946 0.967 0.948 0.965 0.943
30. F28B3.8 imb-1 7515 7.618 0.926 0.967 0.922 0.967 0.978 0.958 0.955 0.945 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
31. Y46G5A.4 snrp-200 13827 7.616 0.921 0.957 0.932 0.957 0.985 0.945 0.966 0.953 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
32. K01G5.4 ran-1 32379 7.616 0.945 0.949 0.916 0.949 0.982 0.960 0.946 0.969 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
33. F46B6.3 smg-4 4959 7.616 0.963 0.950 0.953 0.950 0.956 0.950 0.948 0.946 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
34. C52E4.6 cyl-1 6405 7.616 0.955 0.953 0.904 0.953 0.965 0.980 0.944 0.962 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
35. T02G5.9 kars-1 9763 7.615 0.957 0.960 0.889 0.960 0.980 0.959 0.947 0.963 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
36. D2030.6 prg-1 26751 7.615 0.930 0.946 0.937 0.946 0.957 0.961 0.980 0.958 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
37. K02F3.11 rnp-5 6205 7.612 0.931 0.945 0.929 0.945 0.966 0.966 0.958 0.972 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
38. C26D10.2 hel-1 28697 7.611 0.951 0.949 0.914 0.949 0.963 0.955 0.976 0.954 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
39. F28B3.7 him-1 18274 7.608 0.921 0.957 0.955 0.957 0.963 0.971 0.969 0.915 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
40. F22B5.9 fars-3 7209 7.608 0.962 0.945 0.898 0.945 0.975 0.966 0.951 0.966 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
41. T16G1.11 eif-3.K 14014 7.608 0.963 0.938 0.910 0.938 0.976 0.959 0.975 0.949 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
42. F46A9.4 skr-2 16831 7.607 0.962 0.952 0.919 0.952 0.970 0.962 0.970 0.920 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
43. T27F2.1 skp-1 3532 7.607 0.937 0.960 0.922 0.960 0.963 0.954 0.938 0.973 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
44. Y34D9A.1 mrpl-38 5291 7.605 0.941 0.956 0.892 0.956 0.973 0.977 0.977 0.933 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
45. T25D3.2 mrpl-28 4649 7.604 0.964 0.954 0.932 0.954 0.976 0.950 0.946 0.928 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]
46. K08D10.3 rnp-3 3872 7.604 0.971 0.943 0.944 0.943 0.920 0.972 0.941 0.970 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500505]
47. Y73F8A.34 tag-349 7966 7.603 0.935 0.948 0.940 0.948 0.953 0.976 0.976 0.927
48. Y40B1B.5 eif-3.J 15061 7.603 0.962 0.966 0.905 0.966 0.967 0.971 0.938 0.928 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
49. C15H11.4 dhs-22 21674 7.601 0.953 0.964 0.940 0.964 0.968 0.956 0.932 0.924 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
50. F33H1.4 F33H1.4 2447 7.601 0.972 0.938 0.912 0.938 0.951 0.969 0.971 0.950
51. T06A10.4 lsy-13 7631 7.601 0.962 0.950 0.943 0.950 0.970 0.962 0.933 0.931
52. ZK1127.4 ZK1127.4 3088 7.599 0.927 0.956 0.911 0.956 0.973 0.969 0.954 0.953 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
53. T05H4.6 erfa-1 12542 7.599 0.950 0.971 0.901 0.971 0.955 0.978 0.962 0.911 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
54. D1081.8 cdc-5L 8553 7.598 0.919 0.960 0.949 0.960 0.958 0.961 0.954 0.937 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
55. Y39G10AR.7 ekl-7 7072 7.596 0.963 0.934 0.923 0.934 0.978 0.947 0.951 0.966
56. F42A6.7 hrp-1 28201 7.594 0.959 0.924 0.936 0.924 0.977 0.964 0.962 0.948 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
57. C05C8.6 hpo-9 8263 7.594 0.948 0.956 0.928 0.956 0.956 0.955 0.953 0.942
58. D2089.1 rsp-7 11057 7.594 0.938 0.960 0.942 0.960 0.946 0.972 0.933 0.943 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
59. F42A10.1 abcf-3 5557 7.593 0.952 0.948 0.879 0.948 0.979 0.961 0.952 0.974 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
60. ZK616.6 perm-3 16186 7.592 0.948 0.964 0.911 0.964 0.964 0.979 0.928 0.934 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
61. W01G7.3 rpb-11 7826 7.591 0.945 0.948 0.937 0.948 0.961 0.971 0.960 0.921 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
62. C06A1.5 rpb-6 7515 7.59 0.959 0.959 0.921 0.959 0.959 0.941 0.949 0.943 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
63. T20H4.3 pars-1 8167 7.589 0.944 0.967 0.926 0.967 0.943 0.973 0.933 0.936 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
64. F57B9.5 byn-1 58236 7.589 0.960 0.956 0.873 0.956 0.972 0.985 0.938 0.949 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
65. Y110A7A.8 prp-31 4436 7.588 0.949 0.956 0.930 0.956 0.966 0.969 0.928 0.934 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
66. B0261.4 mrpl-47 8210 7.587 0.940 0.940 0.943 0.940 0.972 0.960 0.945 0.947 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
67. Y111B2A.18 rsp-3 43731 7.587 0.951 0.925 0.932 0.925 0.980 0.967 0.948 0.959 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
68. B0035.3 B0035.3 4118 7.587 0.935 0.940 0.948 0.940 0.962 0.972 0.963 0.927
69. Y71D11A.2 smr-1 4976 7.586 0.931 0.946 0.937 0.946 0.970 0.971 0.933 0.952 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
70. C36B1.3 rpb-3 4442 7.584 0.954 0.925 0.933 0.925 0.973 0.973 0.941 0.960 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
71. F10G8.3 rae-1 7542 7.584 0.965 0.946 0.924 0.946 0.981 0.957 0.943 0.922 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
72. F28H1.3 aars-2 13537 7.583 0.941 0.955 0.932 0.955 0.971 0.957 0.924 0.948 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
73. F56D2.6 ddx-15 12282 7.583 0.923 0.955 0.915 0.955 0.957 0.950 0.967 0.961 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
74. C48E7.3 lpd-2 10330 7.583 0.958 0.951 0.948 0.951 0.950 0.968 0.902 0.955 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
75. Y54H5A.3 tag-262 4269 7.582 0.944 0.959 0.882 0.959 0.969 0.958 0.974 0.937
76. C28C12.9 acdh-13 4102 7.581 0.943 0.962 0.911 0.962 0.968 0.931 0.965 0.939 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_501452]
77. Y47G6A.20 rnp-6 5542 7.581 0.936 0.945 0.915 0.945 0.968 0.990 0.943 0.939 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
78. C33H5.12 rsp-6 23342 7.58 0.928 0.937 0.928 0.937 0.972 0.955 0.974 0.949 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
79. F45H11.3 hpo-35 8299 7.58 0.941 0.963 0.913 0.963 0.949 0.963 0.958 0.930
80. T19B4.2 npp-7 13073 7.579 0.957 0.952 0.937 0.952 0.964 0.943 0.926 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
81. T10C6.4 srx-44 8454 7.579 0.953 0.958 0.923 0.958 0.952 0.956 0.952 0.927 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
82. Y54E10A.9 vbh-1 28746 7.578 0.968 0.959 0.919 0.959 0.944 0.957 0.952 0.920 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
83. Y116A8C.42 snr-1 17062 7.577 0.966 0.960 0.935 0.960 0.944 0.932 0.914 0.966 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
84. T28D9.2 rsp-5 6460 7.577 0.961 0.948 0.906 0.948 0.947 0.933 0.961 0.973 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
85. Y54E2A.2 smg-9 4494 7.576 0.950 0.934 0.914 0.934 0.985 0.970 0.949 0.940
86. ZK856.12 hpo-40 7855 7.575 0.957 0.952 0.920 0.952 0.959 0.973 0.970 0.892
87. Y38A8.3 ulp-2 7403 7.575 0.956 0.940 0.926 0.940 0.976 0.954 0.942 0.941 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
88. F56A8.6 cpf-2 2730 7.575 0.945 0.964 0.912 0.964 0.971 0.980 0.949 0.890 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
89. C43E11.1 acin-1 7781 7.574 0.913 0.943 0.935 0.943 0.974 0.960 0.973 0.933 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
90. F55G1.8 plk-3 12036 7.573 0.929 0.962 0.958 0.962 0.953 0.951 0.922 0.936 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
91. ZK381.4 pgl-1 20651 7.572 0.925 0.966 0.938 0.966 0.945 0.954 0.963 0.915 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
92. C06E7.1 sams-3 26921 7.572 0.959 0.959 0.921 0.959 0.971 0.958 0.965 0.880 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
93. ZK1098.7 mrps-23 2365 7.571 0.925 0.961 0.894 0.961 0.974 0.955 0.940 0.961 Probable 28S ribosomal protein S23, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34748]
94. T23H2.1 npp-12 12425 7.571 0.944 0.947 0.929 0.947 0.955 0.948 0.943 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
95. B0205.11 mrpl-9 9162 7.571 0.953 0.972 0.920 0.972 0.965 0.905 0.925 0.959 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
96. T12E12.2 cec-6 4758 7.57 0.934 0.956 0.924 0.956 0.972 0.963 0.916 0.949 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
97. Y48G8AL.6 smg-2 12561 7.57 0.958 0.951 0.922 0.951 0.942 0.971 0.929 0.946 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
98. T20G5.11 rde-4 3966 7.57 0.948 0.940 0.943 0.940 0.950 0.958 0.952 0.939 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
99. K08E3.8 mdt-29 4678 7.568 0.943 0.948 0.925 0.948 0.955 0.957 0.971 0.921 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
100. Y53C12B.3 nos-3 20231 7.568 0.962 0.957 0.936 0.957 0.938 0.910 0.938 0.970 NanOS related [Source:RefSeq peptide;Acc:NP_496101]

There are 1968 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA