C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F54A3.5

Gene ID Gene Name Reads Transcripts Annotation
F54A3.5 F54A3.5 12028 F54A3.5 MICOS complex subunit Mic10 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4K0]

Genes with expression patterns similar to F54A3.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54A3.5 F54A3.5 12028 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MICOS complex subunit Mic10 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4K0]
2. C13G5.2 C13G5.2 3532 7.42 0.931 0.894 0.925 0.894 0.959 0.974 0.949 0.894
3. F28H1.3 aars-2 13537 7.418 0.914 0.893 0.916 0.893 0.986 0.960 0.908 0.948 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
4. F56D2.6 ddx-15 12282 7.408 0.901 0.883 0.937 0.883 0.976 0.946 0.946 0.936 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
5. ZK328.2 eftu-2 7040 7.373 0.889 0.894 0.911 0.894 0.982 0.933 0.947 0.923 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
6. Y38A8.3 ulp-2 7403 7.364 0.922 0.884 0.938 0.884 0.966 0.955 0.919 0.896 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
7. C26E6.4 rpb-2 7053 7.362 0.929 0.885 0.930 0.885 0.977 0.951 0.917 0.888 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
8. Y46G5A.4 snrp-200 13827 7.362 0.919 0.878 0.936 0.878 0.952 0.939 0.935 0.925 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
9. Y17G7A.1 hmg-12 29989 7.36 0.930 0.865 0.932 0.865 0.971 0.957 0.935 0.905 HMG [Source:RefSeq peptide;Acc:NP_496544]
10. Y65B4BL.2 deps-1 18277 7.359 0.921 0.878 0.940 0.878 0.961 0.957 0.947 0.877
11. F29C4.6 tut-1 5637 7.355 0.916 0.870 0.924 0.870 0.978 0.962 0.901 0.934 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
12. C27B7.1 spr-2 14958 7.349 0.907 0.858 0.933 0.858 0.972 0.970 0.916 0.935 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
13. F23F1.1 nfyc-1 9983 7.344 0.940 0.872 0.934 0.872 0.962 0.931 0.917 0.916 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
14. B0205.11 mrpl-9 9162 7.342 0.907 0.886 0.934 0.886 0.970 0.968 0.885 0.906 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
15. T04A8.11 mrpl-16 5998 7.341 0.869 0.890 0.882 0.890 0.978 0.950 0.959 0.923 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
16. M01D7.6 emr-1 4358 7.339 0.877 0.866 0.928 0.866 0.939 0.957 0.967 0.939 Emerin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01971]
17. T16G1.11 eif-3.K 14014 7.338 0.894 0.902 0.899 0.902 0.943 0.961 0.952 0.885 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
18. W02B12.3 rsp-1 9235 7.336 0.907 0.868 0.919 0.868 0.960 0.955 0.952 0.907 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
19. T26A5.5 jhdm-1 12698 7.335 0.933 0.865 0.951 0.865 0.960 0.919 0.961 0.881 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
20. Y49A3A.5 cyn-1 6411 7.333 0.892 0.901 0.864 0.901 0.985 0.974 0.904 0.912 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
21. F33D4.5 mrpl-1 5337 7.332 0.883 0.878 0.894 0.878 0.964 0.985 0.922 0.928 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
22. ZK1058.4 ccdc-47 8879 7.331 0.897 0.910 0.893 0.910 0.946 0.950 0.933 0.892 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
23. F58D5.1 hrp-2 17211 7.33 0.891 0.885 0.906 0.885 0.973 0.942 0.908 0.940 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
24. R144.7 larp-1 24669 7.328 0.913 0.895 0.883 0.895 0.933 0.914 0.967 0.928 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
25. Y54E5A.4 npp-4 6288 7.326 0.922 0.841 0.956 0.841 0.971 0.954 0.902 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
26. ZK686.4 snu-23 9040 7.326 0.903 0.848 0.921 0.848 0.969 0.951 0.942 0.944 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
27. T11G6.1 hars-1 7908 7.321 0.925 0.891 0.896 0.891 0.961 0.930 0.902 0.925 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
28. W01G7.3 rpb-11 7826 7.32 0.870 0.886 0.915 0.886 0.964 0.964 0.913 0.922 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
29. T10B5.5 cct-7 24616 7.319 0.911 0.909 0.908 0.909 0.966 0.931 0.875 0.910 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
30. C25D7.8 otub-1 7941 7.317 0.933 0.873 0.924 0.873 0.978 0.902 0.928 0.906 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
31. F32E10.6 cec-5 10643 7.316 0.915 0.877 0.919 0.877 0.964 0.928 0.962 0.874 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
32. C26D10.2 hel-1 28697 7.313 0.923 0.858 0.921 0.858 0.927 0.961 0.935 0.930 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
33. W08E3.3 ola-1 20885 7.312 0.917 0.905 0.888 0.905 0.983 0.932 0.892 0.890 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
34. R12C12.2 ran-5 14517 7.312 0.902 0.843 0.939 0.843 0.983 0.971 0.912 0.919 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
35. C06A5.1 inst-1 5068 7.311 0.935 0.843 0.893 0.843 0.954 0.978 0.916 0.949 INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
36. F43G9.9 cpn-1 14505 7.31 0.864 0.858 0.936 0.858 0.978 0.982 0.915 0.919 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
37. F58B3.5 mars-1 6729 7.31 0.938 0.891 0.873 0.891 0.968 0.953 0.852 0.944 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
38. Y71G12B.9 lin-65 7476 7.309 0.915 0.885 0.907 0.885 0.962 0.960 0.854 0.941 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
39. T17E9.2 nmt-1 8017 7.308 0.886 0.898 0.919 0.898 0.922 0.951 0.942 0.892 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
40. T19B4.2 npp-7 13073 7.307 0.936 0.867 0.948 0.867 0.966 0.951 0.870 0.902 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
41. Y37A1B.1 lst-3 10739 7.307 0.880 0.878 0.955 0.878 0.934 0.909 0.953 0.920 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
42. F32H2.4 thoc-3 3861 7.306 0.864 0.877 0.948 0.877 0.944 0.959 0.921 0.916 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
43. Y37E3.15 npp-13 7250 7.302 0.913 0.827 0.931 0.827 0.980 0.960 0.909 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
44. F58E10.3 ddx-17 15107 7.3 0.919 0.890 0.938 0.890 0.961 0.922 0.844 0.936 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
45. W03B1.4 sars-2 2356 7.3 0.823 0.917 0.922 0.917 0.955 0.953 0.922 0.891 Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
46. F56D12.5 vig-1 42594 7.298 0.866 0.870 0.883 0.870 0.983 0.932 0.944 0.950 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
47. D2030.4 D2030.4 13261 7.298 0.881 0.887 0.967 0.887 0.948 0.927 0.911 0.890 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:P90789]
48. C46A5.9 hcf-1 6295 7.297 0.868 0.893 0.910 0.893 0.984 0.941 0.922 0.886 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
49. D2030.1 mans-1 7029 7.296 0.857 0.869 0.946 0.869 0.962 0.957 0.924 0.912 alpha-1,2-Mannosidase [Source:RefSeq peptide;Acc:NP_492116]
50. C33H5.12 rsp-6 23342 7.295 0.873 0.887 0.919 0.887 0.959 0.935 0.946 0.889 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
51. F56F3.1 ifet-1 25772 7.294 0.921 0.867 0.943 0.867 0.962 0.959 0.900 0.875 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
52. Y32F6A.1 set-22 2474 7.293 0.899 0.860 0.882 0.860 0.976 0.978 0.933 0.905 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]
53. C16C10.6 ccdc-55 3581 7.293 0.898 0.868 0.890 0.868 0.968 0.948 0.949 0.904 Nuclear speckle splicing regulatory protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09252]
54. B0035.3 B0035.3 4118 7.292 0.897 0.820 0.942 0.820 0.974 0.958 0.960 0.921
55. Y37E3.3 rpb-10 4051 7.292 0.935 0.867 0.911 0.867 0.976 0.971 0.863 0.902 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
56. Y116A8C.42 snr-1 17062 7.29 0.925 0.867 0.917 0.867 0.981 0.957 0.868 0.908 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
57. Y53C12B.3 nos-3 20231 7.286 0.906 0.866 0.960 0.866 0.979 0.906 0.898 0.905 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
58. T28D9.2 rsp-5 6460 7.286 0.922 0.869 0.916 0.869 0.958 0.928 0.925 0.899 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
59. F22D6.3 nars-1 18624 7.283 0.873 0.888 0.913 0.888 0.949 0.960 0.918 0.894 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
60. Y34D9A.1 mrpl-38 5291 7.283 0.897 0.874 0.888 0.874 0.933 0.951 0.944 0.922 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
61. C34E10.5 prmt-5 12277 7.282 0.931 0.892 0.927 0.892 0.962 0.929 0.914 0.835 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
62. T23H2.1 npp-12 12425 7.28 0.923 0.845 0.919 0.845 0.978 0.963 0.913 0.894 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
63. C48B4.11 C48B4.11 4384 7.276 0.933 0.855 0.900 0.855 0.969 0.947 0.934 0.883
64. T10F2.4 prp-19 11298 7.276 0.911 0.865 0.905 0.865 0.954 0.940 0.924 0.912 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
65. T01E8.6 mrps-14 9328 7.274 0.900 0.892 0.911 0.892 0.972 0.927 0.921 0.859 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
66. Y50D7A.9 taco-1 5949 7.274 0.905 0.895 0.855 0.895 0.985 0.973 0.890 0.876 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
67. B0464.7 baf-1 10161 7.273 0.872 0.880 0.857 0.880 0.985 0.960 0.937 0.902 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
68. T02G5.9 kars-1 9763 7.272 0.891 0.905 0.843 0.905 0.969 0.965 0.898 0.896 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
69. B0303.15 mrpl-11 9889 7.271 0.901 0.918 0.923 0.918 0.968 0.897 0.874 0.872 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
70. F32H2.1 snpc-4 7581 7.27 0.909 0.860 0.881 0.860 0.983 0.935 0.938 0.904 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
71. Y41D4B.19 npp-8 12992 7.27 0.899 0.858 0.956 0.858 0.962 0.947 0.892 0.898 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
72. C18E9.6 tomm-40 13426 7.27 0.873 0.891 0.881 0.891 0.930 0.958 0.953 0.893 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
73. ZK652.9 coq-5 5143 7.27 0.896 0.906 0.860 0.906 0.952 0.965 0.885 0.900 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34666]
74. C08B11.5 sap-49 10553 7.269 0.925 0.859 0.896 0.859 0.956 0.957 0.934 0.883 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
75. B0261.4 mrpl-47 8210 7.268 0.919 0.867 0.919 0.867 0.972 0.946 0.913 0.865 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
76. C04H5.6 mog-4 4517 7.267 0.848 0.855 0.926 0.855 0.967 0.943 0.934 0.939 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
77. Y54G11A.8 ddl-3 2734 7.266 0.885 0.905 0.845 0.905 0.943 0.961 0.916 0.906 Daf-16-Dependent Longevity (WT but not daf-16 lifespan increased) [Source:RefSeq peptide;Acc:NP_001022475]
78. ZK686.2 ZK686.2 3064 7.266 0.841 0.899 0.919 0.899 0.955 0.916 0.887 0.950 Putative ATP-dependent RNA helicase ZK686.2 [Source:UniProtKB/Swiss-Prot;Acc:P34668]
79. F01F1.7 ddx-23 4217 7.265 0.938 0.842 0.872 0.842 0.941 0.954 0.924 0.952 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
80. ZK742.1 xpo-1 20741 7.264 0.887 0.853 0.930 0.853 0.969 0.957 0.891 0.924 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
81. C15F1.4 ppp-1 1774 7.262 0.917 0.883 0.924 0.883 0.936 0.914 0.962 0.843 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
82. W04B5.4 mrpl-30 4938 7.261 0.809 0.920 0.888 0.920 0.957 0.948 0.854 0.965 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497550]
83. F17C11.9 eef-1G 37911 7.261 0.908 0.905 0.846 0.905 0.973 0.887 0.942 0.895 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
84. F52C9.7 mog-3 9880 7.261 0.881 0.851 0.942 0.851 0.966 0.940 0.938 0.892 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
85. Y113G7A.8 fre-1 1485 7.258 0.888 0.870 0.904 0.870 0.959 0.954 0.908 0.905 NADPH-dependent diflavin oxidoreductase 1 [Source:RefSeq peptide;Acc:NP_507875]
86. F29C12.4 gfm-1 8964 7.257 0.878 0.889 0.806 0.889 0.986 0.953 0.902 0.954 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
87. F56C9.6 F56C9.6 4303 7.257 0.887 0.850 0.907 0.850 0.971 0.975 0.926 0.891
88. R09B3.5 mag-1 7496 7.257 0.920 0.857 0.900 0.857 0.969 0.949 0.926 0.879 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
89. Y18D10A.1 attf-6 6942 7.256 0.874 0.863 0.928 0.863 0.955 0.917 0.936 0.920 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
90. B0035.11 leo-1 2968 7.256 0.948 0.853 0.882 0.853 0.949 0.925 0.960 0.886 RNA polymerase-associated protein LEO1 [Source:UniProtKB/Swiss-Prot;Acc:Q17431]
91. T06A10.4 lsy-13 7631 7.256 0.923 0.861 0.928 0.861 0.969 0.961 0.885 0.868
92. Y56A3A.29 ung-1 1900 7.255 0.870 0.857 0.921 0.857 0.972 0.921 0.911 0.946 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
93. Y37H2A.5 fbxa-210 2230 7.255 0.871 0.873 0.936 0.873 0.954 0.955 0.889 0.904 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
94. C47B2.9 C47B2.9 4096 7.253 0.907 0.872 0.890 0.872 0.971 0.970 0.828 0.943
95. Y23H5B.6 Y23H5B.6 5886 7.248 0.919 0.887 0.902 0.887 0.968 0.911 0.885 0.889
96. B0464.2 ctr-9 7610 7.246 0.886 0.846 0.878 0.846 0.965 0.939 0.957 0.929 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
97. F59E12.11 sam-4 8179 7.246 0.881 0.841 0.910 0.841 0.971 0.963 0.886 0.953
98. F55H2.6 clu-1 21404 7.244 0.862 0.894 0.866 0.894 0.969 0.941 0.879 0.939 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
99. R53.2 dtmk-1 6821 7.244 0.857 0.861 0.922 0.861 0.978 0.952 0.930 0.883 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
100. B0511.8 mrps-30 5050 7.243 0.899 0.886 0.907 0.886 0.975 0.925 0.898 0.867 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]

There are 906 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA