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Results for VC5.4

Gene ID Gene Name Reads Transcripts Annotation
VC5.4 mys-1 3996 VC5.4.1, VC5.4.2 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]

Genes with expression patterns similar to VC5.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. VC5.4 mys-1 3996 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Histone acetyltransferase Tip60 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9TYU5]
2. M106.1 mix-1 7950 7.74 0.944 0.979 0.974 0.979 0.971 0.958 0.976 0.959 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
3. F18E2.3 scc-3 13464 7.739 0.945 0.980 0.974 0.980 0.987 0.959 0.946 0.968 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
4. F12F6.3 rib-1 10524 7.728 0.952 0.980 0.986 0.980 0.976 0.957 0.938 0.959 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
5. F41E6.4 smk-1 22394 7.709 0.945 0.982 0.952 0.982 0.984 0.949 0.951 0.964 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
6. C05C8.4 gei-6 6026 7.701 0.937 0.977 0.982 0.977 0.985 0.943 0.939 0.961 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
7. Y55D9A.1 efa-6 10012 7.695 0.949 0.980 0.957 0.980 0.978 0.933 0.944 0.974 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
8. C32F10.5 hmg-3 5776 7.693 0.942 0.982 0.944 0.982 0.988 0.953 0.964 0.938 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
9. T23B12.4 natc-1 7759 7.69 0.938 0.982 0.960 0.982 0.986 0.947 0.952 0.943 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
10. F35B12.5 sas-5 4606 7.689 0.938 0.955 0.983 0.955 0.970 0.974 0.968 0.946 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
11. C29E4.2 kle-2 5527 7.686 0.941 0.987 0.962 0.987 0.976 0.944 0.946 0.943 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
12. C02F4.1 ced-5 9096 7.685 0.935 0.983 0.972 0.983 0.973 0.942 0.966 0.931 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
13. C13B4.2 usp-14 9000 7.683 0.938 0.987 0.973 0.987 0.984 0.962 0.907 0.945 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
14. F12F6.5 srgp-1 9048 7.683 0.933 0.976 0.979 0.976 0.955 0.973 0.945 0.946 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
15. F16D3.2 rsd-6 8211 7.673 0.922 0.964 0.963 0.964 0.980 0.978 0.969 0.933
16. F32A5.1 ada-2 8343 7.672 0.914 0.974 0.975 0.974 0.974 0.969 0.948 0.944 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
17. K10B2.1 lin-23 15896 7.667 0.917 0.974 0.981 0.974 0.963 0.966 0.952 0.940 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
18. F37A4.8 isw-1 9337 7.666 0.930 0.977 0.962 0.977 0.988 0.961 0.936 0.935 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
19. ZC404.9 gck-2 8382 7.666 0.939 0.974 0.964 0.974 0.984 0.978 0.966 0.887 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
20. F11A10.1 lex-1 13720 7.66 0.922 0.973 0.966 0.973 0.978 0.987 0.951 0.910 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
21. C36B1.8 gls-1 8617 7.659 0.933 0.986 0.981 0.986 0.981 0.934 0.931 0.927 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
22. F38A5.13 dnj-11 19678 7.656 0.906 0.975 0.970 0.975 0.993 0.961 0.934 0.942 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
23. C05C10.6 ufd-3 6304 7.653 0.936 0.984 0.975 0.984 0.962 0.959 0.940 0.913 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
24. C54G10.2 rfc-1 8814 7.648 0.939 0.975 0.981 0.975 0.939 0.960 0.939 0.940 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
25. M01E5.5 top-1 25458 7.648 0.910 0.971 0.957 0.971 0.981 0.970 0.968 0.920 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
26. T10F2.3 ulp-1 8351 7.644 0.905 0.980 0.979 0.980 0.980 0.970 0.914 0.936 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
27. ZK287.5 rbx-1 13546 7.644 0.912 0.976 0.976 0.976 0.983 0.952 0.926 0.943 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
28. Y17G7B.17 Y17G7B.17 11197 7.642 0.907 0.965 0.967 0.965 0.978 0.957 0.972 0.931
29. T20H4.4 adr-2 5495 7.639 0.909 0.964 0.947 0.964 0.981 0.981 0.941 0.952 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
30. T17E9.1 kin-18 8172 7.637 0.927 0.981 0.975 0.981 0.964 0.954 0.950 0.905 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
31. C07G1.4 wsp-1 11226 7.635 0.924 0.980 0.958 0.980 0.948 0.930 0.957 0.958 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
32. T20F5.7 T20F5.7 5210 7.634 0.952 0.975 0.969 0.975 0.985 0.950 0.888 0.940
33. F55G1.4 rod-1 1885 7.632 0.918 0.989 0.978 0.989 0.976 0.925 0.946 0.911 ROD (Drosophila RoughDeal) homolog [Source:RefSeq peptide;Acc:NP_501200]
34. Y111B2A.14 pqn-80 6445 7.632 0.927 0.968 0.962 0.968 0.984 0.938 0.950 0.935 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_001255178]
35. F52C9.8 pqe-1 7546 7.628 0.934 0.960 0.958 0.960 0.981 0.946 0.952 0.937 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
36. R01H2.6 ubc-18 13394 7.627 0.854 0.966 0.956 0.966 0.984 0.978 0.968 0.955 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
37. F35G12.8 smc-4 6202 7.626 0.910 0.979 0.966 0.979 0.977 0.923 0.951 0.941 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
38. T05F1.6 hsr-9 13312 7.625 0.942 0.967 0.949 0.967 0.977 0.940 0.938 0.945
39. F36A2.13 ubr-5 9047 7.624 0.956 0.965 0.965 0.965 0.963 0.940 0.943 0.927 UBR E3 ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_492389]
40. F22D6.5 prpf-4 9522 7.623 0.929 0.976 0.963 0.976 0.949 0.946 0.952 0.932 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
41. F44A2.1 tag-153 16535 7.621 0.918 0.974 0.962 0.974 0.972 0.939 0.922 0.960
42. D1007.7 nrd-1 6738 7.621 0.912 0.979 0.970 0.979 0.969 0.958 0.940 0.914 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
43. F43G9.10 mfap-1 9205 7.62 0.927 0.952 0.944 0.952 0.966 0.958 0.964 0.957 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
44. C14B9.4 plk-1 18785 7.619 0.910 0.984 0.971 0.984 0.964 0.922 0.928 0.956 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
45. W03F9.5 ttb-1 8682 7.617 0.928 0.959 0.986 0.959 0.985 0.960 0.907 0.933 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
46. C12D8.10 akt-1 12100 7.614 0.930 0.970 0.988 0.970 0.941 0.950 0.919 0.946 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
47. F01G4.1 swsn-4 14710 7.613 0.915 0.988 0.989 0.988 0.960 0.943 0.904 0.926 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_502082]
48. C38D4.3 mel-28 3515 7.611 0.933 0.946 0.938 0.946 0.981 0.957 0.958 0.952
49. T06D10.2 chaf-1 8121 7.608 0.900 0.974 0.961 0.974 0.962 0.960 0.954 0.923 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
50. C26E6.5 fsn-1 6615 7.607 0.899 0.982 0.978 0.982 0.963 0.961 0.905 0.937 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
51. ZC395.8 ztf-8 5521 7.607 0.929 0.985 0.962 0.985 0.985 0.946 0.894 0.921 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
52. C47D12.1 trr-1 4646 7.606 0.900 0.981 0.980 0.981 0.976 0.933 0.929 0.926 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
53. C10C6.6 catp-8 8079 7.604 0.936 0.976 0.956 0.976 0.985 0.929 0.938 0.908 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
54. B0334.5 B0334.5 4713 7.603 0.885 0.978 0.968 0.978 0.975 0.930 0.930 0.959
55. K07C5.8 cash-1 10523 7.598 0.923 0.974 0.924 0.974 0.977 0.933 0.939 0.954 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
56. C09G9.6 oma-1 18743 7.596 0.899 0.936 0.973 0.936 0.978 0.984 0.964 0.926
57. Y43C5A.6 rad-51 5327 7.595 0.871 0.989 0.979 0.989 0.992 0.917 0.959 0.899 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
58. T01G1.3 sec-31 10504 7.595 0.929 0.971 0.964 0.971 0.982 0.911 0.933 0.934 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
59. C56C10.1 vps-33.2 2038 7.594 0.900 0.965 0.942 0.965 0.978 0.965 0.945 0.934 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495342]
60. Y105E8A.17 ekl-4 4732 7.593 0.932 0.983 0.965 0.983 0.978 0.901 0.908 0.943
61. F01G4.3 skih-2 3353 7.59 0.912 0.981 0.935 0.981 0.981 0.918 0.933 0.949 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
62. C04A2.7 dnj-5 9618 7.588 0.927 0.978 0.967 0.978 0.935 0.963 0.919 0.921 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
63. D1022.7 aka-1 10681 7.588 0.916 0.972 0.971 0.972 0.975 0.953 0.923 0.906 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
64. Y32F6A.3 pap-1 11972 7.587 0.951 0.969 0.944 0.969 0.967 0.946 0.931 0.910 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
65. EEED8.7 rsp-4 13043 7.585 0.917 0.961 0.962 0.961 0.971 0.951 0.893 0.969 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
66. F46F11.10 F46F11.10 968 7.584 0.922 0.949 0.963 0.949 0.971 0.967 0.914 0.949
67. ZK858.1 gld-4 14162 7.584 0.912 0.955 0.958 0.955 0.979 0.943 0.951 0.931 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
68. F52E1.10 vha-18 3090 7.583 0.884 0.976 0.969 0.976 0.952 0.949 0.957 0.920 Probable V-type proton ATPase subunit H 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20666]
69. D2089.1 rsp-7 11057 7.583 0.928 0.964 0.947 0.964 0.988 0.923 0.938 0.931 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
70. F36D4.3 hum-2 16493 7.582 0.946 0.961 0.969 0.961 0.951 0.933 0.904 0.957 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
71. T28F3.1 nra-1 7034 7.581 0.916 0.959 0.979 0.959 0.958 0.948 0.966 0.896 Nicotinic receptor-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB9]
72. CD4.6 pas-6 18332 7.581 0.878 0.969 0.936 0.969 0.973 0.964 0.926 0.966 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
73. ZK328.5 npp-10 7652 7.577 0.930 0.966 0.946 0.966 0.991 0.951 0.889 0.938 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
74. K10B2.5 ani-2 11397 7.577 0.911 0.970 0.982 0.970 0.967 0.941 0.934 0.902 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
75. C16C10.3 hrde-1 14922 7.577 0.907 0.984 0.981 0.984 0.956 0.893 0.936 0.936 Heritable RNAi Deficient [Source:RefSeq peptide;Acc:NP_497834]
76. T01G9.4 npp-2 5361 7.575 0.912 0.971 0.938 0.971 0.983 0.941 0.894 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
77. T05E11.4 spo-11 2806 7.574 0.886 0.988 0.920 0.988 0.984 0.909 0.943 0.956 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
78. Y106G6H.12 duo-3 2619 7.571 0.881 0.971 0.944 0.971 0.952 0.975 0.957 0.920 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_001293463]
79. Y61A9LA.8 sut-2 11388 7.569 0.911 0.964 0.941 0.964 0.980 0.937 0.930 0.942 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
80. F36F2.3 rbpl-1 15376 7.569 0.862 0.973 0.938 0.973 0.974 0.946 0.945 0.958 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
81. C02F5.9 pbs-6 20120 7.569 0.861 0.975 0.945 0.975 0.965 0.951 0.943 0.954 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
82. T13F2.7 sna-2 4771 7.567 0.946 0.979 0.953 0.979 0.972 0.897 0.901 0.940 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
83. W01B6.9 ndc-80 4670 7.567 0.910 0.957 0.965 0.957 0.974 0.959 0.904 0.941 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
84. M7.2 klc-1 4706 7.567 0.893 0.973 0.968 0.973 0.959 0.968 0.888 0.945 Kinesin Light Chain [Source:RefSeq peptide;Acc:NP_001255535]
85. F23B2.6 aly-2 7301 7.566 0.870 0.932 0.956 0.932 0.991 0.976 0.955 0.954 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
86. ZC308.1 gld-2 9622 7.566 0.930 0.984 0.942 0.984 0.916 0.991 0.915 0.904 Poly(A) RNA polymerase gld-2 [Source:UniProtKB/Swiss-Prot;Acc:O17087]
87. K02F2.1 dpf-3 11465 7.565 0.946 0.965 0.967 0.965 0.982 0.921 0.914 0.905 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
88. C25H3.7 C25H3.7 6334 7.565 0.873 0.964 0.950 0.964 0.977 0.953 0.948 0.936
89. R119.4 pqn-59 16065 7.564 0.911 0.975 0.969 0.975 0.964 0.906 0.902 0.962 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
90. F39H11.5 pbs-7 13631 7.563 0.868 0.985 0.961 0.985 0.984 0.932 0.881 0.967 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
91. Y38A8.2 pbs-3 18117 7.56 0.894 0.975 0.966 0.975 0.986 0.908 0.907 0.949 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
92. C01G5.8 fan-1 1432 7.559 0.841 0.968 0.951 0.968 0.977 0.946 0.957 0.951 Fanconi-associated nuclease 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90740]
93. T07F8.3 gld-3 9324 7.559 0.859 0.971 0.970 0.971 0.977 0.959 0.904 0.948 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
94. Y81G3A.3 gcn-2 5831 7.557 0.925 0.965 0.947 0.965 0.982 0.913 0.933 0.927 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
95. R11A8.7 R11A8.7 15531 7.557 0.937 0.979 0.930 0.979 0.953 0.948 0.920 0.911 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
96. Y2H9A.1 mes-4 3566 7.556 0.949 0.968 0.946 0.968 0.957 0.940 0.950 0.878 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
97. K12D12.1 top-2 18694 7.555 0.962 0.962 0.971 0.962 0.969 0.916 0.868 0.945 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
98. F17C11.10 F17C11.10 4355 7.554 0.921 0.989 0.932 0.989 0.990 0.914 0.894 0.925
99. F56A3.3 npp-6 5425 7.552 0.912 0.978 0.962 0.978 0.967 0.939 0.889 0.927 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
100. T27C4.4 lin-40 16565 7.55 0.923 0.983 0.980 0.983 0.970 0.859 0.943 0.909

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA