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Results for F56A3.3

Gene ID Gene Name Reads Transcripts Annotation
F56A3.3 npp-6 5425 F56A3.3a.1, F56A3.3a.2, F56A3.3b Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]

Genes with expression patterns similar to F56A3.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56A3.3 npp-6 5425 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
2. T05F1.6 hsr-9 13312 7.747 0.970 0.962 0.976 0.962 0.983 0.973 0.955 0.966
3. F18E2.3 scc-3 13464 7.737 0.976 0.979 0.978 0.979 0.948 0.975 0.955 0.947 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
4. K12D12.1 top-2 18694 7.725 0.960 0.965 0.963 0.965 0.962 0.993 0.961 0.956 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
5. D1081.9 D1081.9 3792 7.722 0.955 0.967 0.964 0.967 0.943 0.991 0.971 0.964
6. T23B12.4 natc-1 7759 7.72 0.957 0.985 0.971 0.985 0.959 0.962 0.955 0.946 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
7. R02D3.5 fnta-1 5258 7.719 0.967 0.974 0.976 0.974 0.979 0.958 0.942 0.949 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
8. F35G12.8 smc-4 6202 7.712 0.952 0.980 0.972 0.980 0.974 0.981 0.904 0.969 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
9. F28B3.7 him-1 18274 7.709 0.958 0.976 0.976 0.976 0.954 0.953 0.955 0.961 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
10. F01G4.3 skih-2 3353 7.707 0.956 0.984 0.957 0.984 0.964 0.976 0.929 0.957 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
11. D1007.7 nrd-1 6738 7.705 0.950 0.976 0.988 0.976 0.943 0.981 0.929 0.962 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
12. C36B1.8 gls-1 8617 7.705 0.950 0.985 0.977 0.985 0.977 0.951 0.944 0.936 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
13. T07C4.10 T07C4.10 1563 7.704 0.954 0.963 0.992 0.963 0.979 0.948 0.954 0.951
14. C05C8.4 gei-6 6026 7.699 0.939 0.980 0.964 0.980 0.945 0.992 0.958 0.941 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
15. Y55D9A.1 efa-6 10012 7.698 0.936 0.983 0.977 0.983 0.943 0.983 0.960 0.933 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
16. F17C11.10 F17C11.10 4355 7.695 0.952 0.969 0.959 0.969 0.974 0.987 0.963 0.922
17. Y43C5A.6 rad-51 5327 7.691 0.957 0.971 0.970 0.971 0.973 0.984 0.905 0.960 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
18. F52E1.10 vha-18 3090 7.684 0.960 0.964 0.984 0.964 0.950 0.958 0.931 0.973 Probable V-type proton ATPase subunit H 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20666]
19. T17E9.1 kin-18 8172 7.68 0.958 0.969 0.977 0.969 0.938 0.983 0.932 0.954 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
20. W03F9.5 ttb-1 8682 7.679 0.960 0.964 0.980 0.964 0.977 0.989 0.958 0.887 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
21. F41E6.4 smk-1 22394 7.679 0.960 0.977 0.965 0.977 0.944 0.981 0.948 0.927 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
22. T01G9.4 npp-2 5361 7.675 0.963 0.975 0.957 0.975 0.946 0.951 0.945 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
23. F46A9.4 skr-2 16831 7.67 0.945 0.950 0.966 0.950 0.984 0.976 0.951 0.948 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
24. D2089.1 rsp-7 11057 7.669 0.956 0.967 0.979 0.967 0.949 0.980 0.924 0.947 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
25. ZK328.5 npp-10 7652 7.664 0.956 0.968 0.985 0.968 0.973 0.982 0.921 0.911 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
26. C50C3.6 prp-8 19582 7.663 0.963 0.951 0.968 0.951 0.972 0.969 0.939 0.950 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
27. T10F2.1 gars-1 7204 7.661 0.946 0.963 0.961 0.963 0.954 0.990 0.942 0.942 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
28. T26A5.6 T26A5.6 9194 7.661 0.944 0.960 0.975 0.960 0.922 0.975 0.963 0.962
29. R06F6.5 npp-19 5067 7.66 0.945 0.964 0.977 0.964 0.976 0.969 0.944 0.921 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
30. F44A2.1 tag-153 16535 7.659 0.960 0.979 0.960 0.979 0.945 0.961 0.927 0.948
31. T10F2.3 ulp-1 8351 7.658 0.948 0.970 0.977 0.970 0.924 0.973 0.954 0.942 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
32. F46B6.3 smg-4 4959 7.658 0.972 0.966 0.970 0.966 0.975 0.941 0.923 0.945 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
33. T06D8.6 cchl-1 26292 7.657 0.955 0.962 0.963 0.962 0.946 0.979 0.964 0.926 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
34. Y61A9LA.8 sut-2 11388 7.656 0.937 0.963 0.970 0.963 0.965 0.977 0.953 0.928 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
35. Y73F8A.34 tag-349 7966 7.655 0.974 0.935 0.988 0.935 0.956 0.974 0.920 0.973
36. B0205.1 B0205.1 2403 7.655 0.957 0.969 0.964 0.969 0.959 0.982 0.909 0.946
37. C43E11.1 acin-1 7781 7.654 0.927 0.968 0.985 0.968 0.978 0.953 0.955 0.920 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
38. C14B9.4 plk-1 18785 7.653 0.954 0.965 0.981 0.965 0.948 0.973 0.902 0.965 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
39. ZK381.4 pgl-1 20651 7.651 0.935 0.956 0.956 0.956 0.990 0.959 0.968 0.931 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
40. C39E9.13 rfc-3 9443 7.65 0.951 0.955 0.973 0.955 0.972 0.955 0.936 0.953 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
41. F37A4.8 isw-1 9337 7.649 0.980 0.957 0.974 0.957 0.962 0.982 0.916 0.921 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
42. W01B6.9 ndc-80 4670 7.648 0.948 0.943 0.961 0.943 0.942 0.985 0.973 0.953 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
43. Y43H11AL.3 pqn-85 2924 7.647 0.925 0.973 0.966 0.973 0.928 0.963 0.972 0.947 Nipped-B-like protein pqn-85 [Source:UniProtKB/Swiss-Prot;Acc:Q95XZ5]
44. F39H11.5 pbs-7 13631 7.645 0.942 0.971 0.984 0.971 0.961 0.969 0.916 0.931 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
45. C29E4.2 kle-2 5527 7.645 0.954 0.967 0.961 0.967 0.951 0.983 0.909 0.953 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
46. T01G1.3 sec-31 10504 7.645 0.966 0.973 0.968 0.973 0.961 0.980 0.891 0.933 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
47. F56D1.7 daz-1 23684 7.645 0.948 0.949 0.981 0.949 0.959 0.957 0.964 0.938 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
48. Y81G3A.3 gcn-2 5831 7.644 0.960 0.969 0.980 0.969 0.930 0.982 0.930 0.924 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
49. C25A1.5 C25A1.5 9135 7.644 0.948 0.947 0.968 0.947 0.946 0.988 0.943 0.957
50. F12F6.3 rib-1 10524 7.643 0.944 0.956 0.966 0.956 0.969 0.966 0.928 0.958 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
51. ZC404.9 gck-2 8382 7.642 0.940 0.981 0.975 0.981 0.953 0.976 0.901 0.935 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
52. B0334.5 B0334.5 4713 7.642 0.948 0.974 0.964 0.974 0.956 0.980 0.938 0.908
53. ZK1127.4 ZK1127.4 3088 7.641 0.951 0.960 0.966 0.960 0.969 0.942 0.942 0.951 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
54. F58A4.8 tbg-1 2839 7.641 0.962 0.959 0.935 0.959 0.950 0.959 0.954 0.963 Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
55. Y48G8AL.6 smg-2 12561 7.64 0.943 0.965 0.966 0.965 0.958 0.978 0.939 0.926 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
56. T04A8.14 emb-5 11746 7.639 0.958 0.960 0.975 0.960 0.970 0.941 0.943 0.932 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
57. Y54E10A.9 vbh-1 28746 7.638 0.923 0.953 0.952 0.953 0.983 0.961 0.953 0.960 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
58. C13B4.2 usp-14 9000 7.637 0.967 0.966 0.964 0.966 0.926 0.960 0.928 0.960 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
59. Y71F9B.16 dnj-30 4262 7.637 0.933 0.969 0.975 0.969 0.957 0.949 0.950 0.935 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
60. F48E8.6 disl-2 8774 7.636 0.943 0.970 0.962 0.970 0.962 0.984 0.944 0.901 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
61. T06D10.2 chaf-1 8121 7.636 0.955 0.958 0.956 0.958 0.941 0.972 0.961 0.935 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
62. CD4.6 pas-6 18332 7.634 0.952 0.964 0.964 0.964 0.963 0.974 0.908 0.945 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
63. C06E7.1 sams-3 26921 7.632 0.950 0.943 0.959 0.943 0.981 0.962 0.966 0.928 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
64. T13H5.7 rnh-2 3204 7.631 0.968 0.971 0.971 0.971 0.945 0.981 0.883 0.941 Ribonuclease H2 subunit A [Source:UniProtKB/Swiss-Prot;Acc:Q9U6P6]
65. F58B6.3 par-2 3914 7.627 0.947 0.952 0.962 0.952 0.956 0.983 0.916 0.959
66. C17E4.5 pabp-2 12843 7.627 0.942 0.970 0.968 0.970 0.935 0.972 0.947 0.923 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
67. R06C1.1 hda-3 1998 7.625 0.971 0.966 0.963 0.966 0.959 0.968 0.903 0.929 Histone deacetylase [Source:RefSeq peptide;Acc:NP_493026]
68. Y49E10.19 ani-1 12757 7.625 0.954 0.953 0.976 0.953 0.925 0.985 0.924 0.955 Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
69. Y113G7B.23 swsn-1 13766 7.625 0.964 0.955 0.973 0.955 0.958 0.942 0.938 0.940 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
70. Y47G6A.20 rnp-6 5542 7.623 0.945 0.975 0.965 0.975 0.949 0.969 0.942 0.903 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
71. T10B5.6 knl-3 3516 7.62 0.945 0.962 0.976 0.962 0.946 0.972 0.924 0.933 Kinetochore NuLl [Source:RefSeq peptide;Acc:NP_503520]
72. F46F11.10 F46F11.10 968 7.62 0.969 0.932 0.968 0.932 0.958 0.974 0.949 0.938
73. T20F5.7 T20F5.7 5210 7.619 0.954 0.947 0.982 0.947 0.961 0.986 0.944 0.898
74. Y92C3B.2 uaf-1 14981 7.618 0.955 0.968 0.968 0.968 0.945 0.965 0.931 0.918 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
75. C18G1.5 hil-4 21692 7.618 0.943 0.951 0.974 0.951 0.966 0.949 0.942 0.942 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
76. C03D6.4 npp-14 4889 7.618 0.933 0.968 0.957 0.968 0.946 0.971 0.925 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
77. EEED8.7 rsp-4 13043 7.617 0.941 0.946 0.973 0.946 0.975 0.995 0.933 0.908 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
78. C09G4.3 cks-1 17852 7.617 0.952 0.945 0.973 0.945 0.960 0.962 0.936 0.944 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
79. K10D2.3 cid-1 7175 7.616 0.927 0.954 0.974 0.954 0.954 0.986 0.933 0.934 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
80. F52C9.8 pqe-1 7546 7.615 0.938 0.966 0.980 0.966 0.942 0.975 0.931 0.917 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
81. F57B1.2 sun-1 5721 7.613 0.943 0.971 0.958 0.971 0.964 0.975 0.934 0.897 Sun domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20924]
82. C39E9.12 C39E9.12 3588 7.613 0.953 0.966 0.941 0.966 0.943 0.961 0.922 0.961
83. C26E6.5 fsn-1 6615 7.612 0.958 0.962 0.956 0.962 0.928 0.984 0.917 0.945 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
84. F31D4.3 fkb-6 21313 7.612 0.956 0.960 0.953 0.960 0.937 0.986 0.933 0.927 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
85. R01H2.6 ubc-18 13394 7.612 0.945 0.948 0.955 0.948 0.965 0.975 0.930 0.946 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
86. Y65B4BL.2 deps-1 18277 7.611 0.961 0.958 0.983 0.958 0.952 0.921 0.936 0.942
87. C16C10.2 C16C10.2 2303 7.611 0.954 0.950 0.976 0.950 0.938 0.954 0.945 0.944 Probable U3 small nucleolar RNA-associated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q09462]
88. F25B5.2 nop-1 4127 7.611 0.964 0.958 0.976 0.958 0.958 0.947 0.935 0.915 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
89. R11A8.7 R11A8.7 15531 7.611 0.934 0.977 0.952 0.977 0.927 0.946 0.954 0.944 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
90. T21E12.4 dhc-1 20370 7.611 0.972 0.958 0.979 0.958 0.954 0.957 0.898 0.935 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
91. F10G8.3 rae-1 7542 7.61 0.941 0.966 0.964 0.966 0.963 0.941 0.947 0.922 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
92. R06C7.1 wago-1 4303 7.609 0.941 0.935 0.960 0.935 0.970 0.979 0.966 0.923 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
93. C18G1.4 pgl-3 5291 7.609 0.950 0.958 0.973 0.958 0.968 0.943 0.913 0.946 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
94. Y38C1AA.2 csn-3 3451 7.609 0.968 0.957 0.981 0.957 0.893 0.964 0.946 0.943 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]
95. ZK1098.8 mut-7 4940 7.609 0.940 0.958 0.971 0.958 0.966 0.937 0.946 0.933 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
96. K02F2.3 teg-4 3873 7.606 0.931 0.974 0.983 0.974 0.946 0.926 0.959 0.913 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
97. T05E11.4 spo-11 2806 7.605 0.954 0.978 0.928 0.978 0.951 0.952 0.930 0.934 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
98. C07A9.7 set-3 2026 7.605 0.920 0.964 0.947 0.964 0.972 0.956 0.960 0.922 SET domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P34318]
99. F59B2.7 rab-6.1 10749 7.605 0.957 0.930 0.979 0.930 0.951 0.964 0.934 0.960 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
100. C53D5.6 imb-3 28921 7.605 0.933 0.955 0.948 0.955 0.980 0.965 0.949 0.920 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA