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Results for F28F8.3

Gene ID Gene Name Reads Transcripts Annotation
F28F8.3 lsm-5 2445 F28F8.3.1, F28F8.3.2 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_506870]

Genes with expression patterns similar to F28F8.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28F8.3 lsm-5 2445 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_506870]
2. Y40G12A.1 ubh-3 4142 7.464 0.956 0.893 0.956 0.893 0.941 0.949 0.944 0.932 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
3. C34D4.12 cyn-12 7363 7.46 0.955 0.880 0.950 0.880 0.977 0.923 0.962 0.933 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
4. D2023.5 mpst-1 10328 7.449 0.955 0.883 0.961 0.883 0.939 0.929 0.948 0.951 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
5. Y62E10A.12 lsm-3 4322 7.446 0.980 0.871 0.946 0.871 0.983 0.942 0.961 0.892 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
6. Y18D10A.17 car-1 87364 7.445 0.958 0.893 0.951 0.893 0.902 0.966 0.934 0.948 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
7. T23G11.3 gld-1 41748 7.437 0.953 0.885 0.959 0.885 0.927 0.942 0.942 0.944 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
8. Y48B6A.3 xrn-2 4881 7.432 0.905 0.916 0.949 0.916 0.962 0.945 0.926 0.913 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
9. C34E10.2 gop-2 5684 7.432 0.983 0.889 0.934 0.889 0.961 0.967 0.922 0.887 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
10. Y39B6A.35 tgt-2 2364 7.432 0.970 0.855 0.952 0.855 0.977 0.959 0.929 0.935 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
11. W08E3.1 snr-2 14849 7.416 0.975 0.899 0.954 0.899 0.927 0.897 0.945 0.920 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
12. W01A8.5 tofu-5 5678 7.416 0.943 0.875 0.929 0.875 0.953 0.975 0.925 0.941 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
13. T21B10.7 cct-2 13999 7.404 0.962 0.909 0.939 0.909 0.951 0.922 0.947 0.865 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
14. F01F1.8 cct-6 29460 7.399 0.964 0.901 0.939 0.901 0.927 0.941 0.950 0.876 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
15. F09G2.9 attf-2 14771 7.398 0.965 0.883 0.929 0.883 0.963 0.963 0.952 0.860 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
16. F53A2.4 nud-1 7818 7.39 0.970 0.861 0.943 0.861 0.955 0.963 0.953 0.884 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
17. Y14H12B.2 Y14H12B.2 6496 7.387 0.959 0.870 0.949 0.870 0.960 0.955 0.939 0.885
18. C01F6.8 icln-1 6586 7.384 0.969 0.893 0.946 0.893 0.922 0.896 0.929 0.936 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
19. C25A1.13 mrpl-34 3170 7.38 0.971 0.914 0.916 0.914 0.880 0.933 0.938 0.914 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492686]
20. H43I07.2 rpac-40 3342 7.378 0.957 0.849 0.907 0.849 0.946 0.956 0.951 0.963 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
21. Y71F9B.4 snr-7 13542 7.372 0.962 0.880 0.951 0.880 0.975 0.922 0.895 0.907 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
22. C07G2.3 cct-5 44703 7.37 0.971 0.913 0.954 0.913 0.933 0.914 0.946 0.826 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
23. F59A2.1 npp-9 34375 7.363 0.971 0.893 0.961 0.893 0.950 0.931 0.909 0.855 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
24. K07A1.12 lin-53 15817 7.359 0.953 0.859 0.926 0.859 0.978 0.943 0.943 0.898 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
25. M01E11.5 cey-3 20931 7.357 0.971 0.844 0.944 0.844 0.937 0.944 0.933 0.940 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
26. T21B10.1 mrpl-50 14595 7.356 0.952 0.901 0.960 0.901 0.922 0.911 0.938 0.871 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
27. Y54E5A.6 Y54E5A.6 770 7.352 0.954 0.897 0.965 0.897 0.943 0.905 0.887 0.904
28. W06H3.3 ctps-1 8363 7.351 0.966 0.922 0.923 0.922 0.922 0.902 0.900 0.894 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
29. F43G9.5 cfim-1 9169 7.343 0.970 0.843 0.936 0.843 0.947 0.926 0.963 0.915 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
30. B0035.4 pfd-4 5006 7.343 0.949 0.885 0.918 0.885 0.950 0.899 0.946 0.911 Probable prefoldin subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q17435]
31. D2096.8 nap-1 59459 7.341 0.907 0.898 0.947 0.898 0.963 0.868 0.945 0.915 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
32. Y54H5A.2 Y54H5A.2 2168 7.338 0.925 0.849 0.970 0.849 0.986 0.945 0.912 0.902
33. C49H3.10 xpo-3 9101 7.336 0.946 0.862 0.959 0.862 0.982 0.930 0.910 0.885 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
34. F21F3.6 F21F3.6 57056 7.332 0.930 0.873 0.957 0.873 0.917 0.954 0.944 0.884
35. K04C2.3 K04C2.3 23540 7.325 0.906 0.884 0.933 0.884 0.965 0.928 0.917 0.908
36. R09B3.1 exo-3 4401 7.325 0.972 0.853 0.927 0.853 0.925 0.930 0.910 0.955 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
37. B0414.5 cpb-3 11584 7.323 0.963 0.868 0.922 0.868 0.920 0.948 0.930 0.904 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
38. F26F4.11 rpb-8 7601 7.323 0.957 0.887 0.942 0.887 0.927 0.928 0.899 0.896 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
39. Y38C9A.2 cgp-1 11756 7.322 0.939 0.893 0.907 0.893 0.898 0.968 0.924 0.900 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
40. Y55F3AR.3 cct-8 17979 7.321 0.958 0.903 0.949 0.903 0.929 0.926 0.933 0.820 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
41. C48B6.3 C48B6.3 6610 7.321 0.949 0.845 0.938 0.845 0.942 0.960 0.925 0.917
42. C07H6.5 cgh-1 60576 7.318 0.959 0.844 0.938 0.844 0.934 0.938 0.943 0.918 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
43. W06E11.4 sbds-1 6701 7.315 0.960 0.883 0.968 0.883 0.934 0.921 0.870 0.896 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
44. K08F4.2 gtbp-1 25222 7.315 0.947 0.869 0.955 0.869 0.965 0.911 0.959 0.840 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
45. C26D10.1 ran-3 11111 7.314 0.955 0.918 0.946 0.918 0.908 0.891 0.886 0.892 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
46. C15H11.8 rpoa-12 2257 7.314 0.948 0.838 0.907 0.838 0.934 0.975 0.938 0.936 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_506572]
47. B0205.9 B0205.9 3651 7.314 0.969 0.860 0.959 0.860 0.903 0.979 0.907 0.877
48. T01B7.4 cyn-11 2088 7.313 0.978 0.878 0.842 0.878 0.968 0.962 0.924 0.883 Peptidyl-prolyl cis-trans isomerase 11 [Source:UniProtKB/Swiss-Prot;Acc:P52018]
49. R07E5.14 rnp-4 11659 7.312 0.974 0.856 0.955 0.856 0.931 0.917 0.934 0.889 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
50. C15H11.6 nxf-2 1545 7.311 0.952 0.898 0.893 0.898 0.909 0.918 0.934 0.909 Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]
51. F18A1.8 pid-1 3751 7.311 0.962 0.900 0.933 0.900 0.946 0.909 0.829 0.932 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
52. M18.5 ddb-1 3823 7.311 0.933 0.899 0.952 0.899 0.955 0.941 0.905 0.827 DNA damage-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21554]
53. B0285.4 B0285.4 3474 7.31 0.928 0.851 0.922 0.851 0.920 0.932 0.943 0.963 Probable leucine carboxyl methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46554]
54. R13A5.12 lpd-7 10476 7.308 0.906 0.892 0.949 0.892 0.958 0.935 0.898 0.878 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
55. B0024.13 B0024.13 4311 7.306 0.945 0.863 0.900 0.863 0.964 0.946 0.930 0.895 Polyprenol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17428]
56. C18E9.3 szy-20 6819 7.303 0.966 0.840 0.931 0.840 0.946 0.958 0.902 0.920 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
57. C26B2.6 elpc-4 3600 7.302 0.945 0.849 0.955 0.849 0.943 0.938 0.913 0.910 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
58. T28D9.10 snr-3 9995 7.3 0.964 0.867 0.962 0.867 0.954 0.927 0.928 0.831 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
59. C07E3.2 pro-2 4193 7.299 0.869 0.925 0.934 0.925 0.959 0.903 0.896 0.888 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
60. ZK856.10 rpc-25 3282 7.299 0.925 0.880 0.949 0.880 0.904 0.960 0.925 0.876 RNA Polymerase, Class III (C) [Source:RefSeq peptide;Acc:NP_505625]
61. F52B5.3 F52B5.3 2077 7.298 0.964 0.869 0.912 0.869 0.896 0.939 0.958 0.891
62. Y73B6BL.3 exos-2 2624 7.296 0.963 0.886 0.921 0.886 0.980 0.885 0.927 0.848 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
63. Y54E10A.11 Y54E10A.11 2415 7.292 0.955 0.842 0.955 0.842 0.980 0.947 0.934 0.837 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
64. C42C1.13 C42C1.13 1509 7.292 0.965 0.863 0.937 0.863 0.921 0.934 0.884 0.925 Protein-lysine methyltransferase C42C1.13 [Source:UniProtKB/Swiss-Prot;Acc:A7IQW5]
65. F26B1.3 ima-2 18826 7.29 0.941 0.912 0.923 0.912 0.956 0.847 0.910 0.889 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
66. Y39G10AR.20 tbca-1 4155 7.29 0.960 0.893 0.958 0.893 0.933 0.843 0.919 0.891 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
67. F52F12.4 lsl-1 4055 7.289 0.942 0.890 0.899 0.890 0.973 0.883 0.886 0.926 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
68. R09B3.5 mag-1 7496 7.287 0.955 0.917 0.931 0.917 0.929 0.872 0.860 0.906 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
69. C15H11.9 rrbs-1 9177 7.287 0.893 0.893 0.945 0.893 0.959 0.940 0.901 0.863 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
70. Y71F9AM.5 nxt-1 5223 7.284 0.949 0.887 0.914 0.887 0.930 0.918 0.954 0.845 NTF2-related export protein [Source:UniProtKB/Swiss-Prot;Acc:Q9U757]
71. F43C1.6 mrpl-21 2778 7.281 0.949 0.842 0.924 0.842 0.923 0.964 0.960 0.877 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
72. Y37D8A.9 mrg-1 14369 7.279 0.953 0.886 0.914 0.886 0.955 0.892 0.898 0.895 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
73. F32A5.7 lsm-4 3785 7.279 0.977 0.876 0.958 0.876 0.923 0.924 0.881 0.864 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
74. B0513.2 B0513.2 3641 7.279 0.931 0.870 0.922 0.870 0.985 0.951 0.929 0.821
75. C17H12.13 anat-1 12995 7.277 0.966 0.887 0.919 0.887 0.927 0.940 0.954 0.797 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
76. F28D1.1 wdr-46 4050 7.272 0.900 0.899 0.937 0.899 0.951 0.945 0.855 0.886 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
77. C34E10.11 mrps-26 4649 7.269 0.925 0.907 0.940 0.907 0.977 0.855 0.883 0.875 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
78. K01G5.2 hpl-2 6781 7.269 0.961 0.879 0.960 0.879 0.956 0.863 0.903 0.868 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
79. H27M09.2 rpb-5 4744 7.267 0.978 0.848 0.946 0.848 0.963 0.959 0.904 0.821 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
80. T14G10.6 tsp-12 10308 7.265 0.918 0.873 0.884 0.873 0.908 0.975 0.927 0.907 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
81. Y55F3AM.1 mrps-25 4611 7.265 0.936 0.864 0.970 0.864 0.931 0.927 0.871 0.902 Probable 28S ribosomal protein S25, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9N361]
82. Y37D8A.11 cec-7 8801 7.265 0.961 0.888 0.960 0.888 0.958 0.879 0.895 0.836 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
83. F23B2.13 rpb-12 2738 7.264 0.972 0.923 0.922 0.923 0.924 0.882 0.850 0.868 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_001294129]
84. Y53C12B.2 Y53C12B.2 6115 7.264 0.947 0.877 0.914 0.877 0.968 0.952 0.939 0.790 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
85. F15D4.1 btf-1 2519 7.263 0.923 0.886 0.918 0.886 0.960 0.918 0.909 0.863 BTAF (TBP-associated factor) homolog [Source:RefSeq peptide;Acc:NP_496802]
86. F21C3.4 rde-2 6286 7.261 0.950 0.862 0.943 0.862 0.966 0.923 0.881 0.874
87. C46A5.6 C46A5.6 2321 7.26 0.874 0.901 0.923 0.901 0.962 0.924 0.837 0.938
88. T09E8.2 him-17 4153 7.259 0.928 0.869 0.898 0.869 0.958 0.962 0.846 0.929 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
89. Y56A3A.19 Y56A3A.19 9680 7.256 0.925 0.854 0.904 0.854 0.974 0.929 0.916 0.900 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
90. C06A1.5 rpb-6 7515 7.255 0.974 0.868 0.943 0.868 0.946 0.901 0.878 0.877 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
91. W02B12.11 W02B12.11 8336 7.254 0.965 0.817 0.905 0.817 0.949 0.957 0.914 0.930 N-acetyllactosamine synthase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGS9]
92. Y37E3.3 rpb-10 4051 7.253 0.960 0.917 0.918 0.917 0.949 0.867 0.891 0.834 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
93. K11H3.6 mrpl-36 7328 7.252 0.952 0.873 0.933 0.873 0.960 0.874 0.908 0.879 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
94. C28A5.1 C28A5.1 1076 7.252 0.961 0.832 0.944 0.832 0.968 0.951 0.892 0.872
95. ZC410.2 mppb-1 3991 7.251 0.965 0.867 0.942 0.867 0.912 0.909 0.908 0.881 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
96. T28D9.2 rsp-5 6460 7.25 0.973 0.902 0.920 0.902 0.961 0.919 0.854 0.819 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
97. C36A4.5 maph-1.3 15493 7.25 0.923 0.849 0.891 0.849 0.955 0.976 0.949 0.858 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
98. C17G10.2 C17G10.2 2288 7.249 0.973 0.876 0.912 0.876 0.919 0.967 0.916 0.810
99. T13C2.4 ssup-72 1634 7.249 0.950 0.896 0.910 0.896 0.948 0.898 0.918 0.833 SSU (yeast Suppressor of SUa7) Protein homolog [Source:RefSeq peptide;Acc:NP_495386]
100. C03D6.8 rpl-24.2 5932 7.248 0.907 0.880 0.875 0.880 0.979 0.900 0.917 0.910 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA