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Results for Y55F3AM.1

Gene ID Gene Name Reads Transcripts Annotation
Y55F3AM.1 mrps-25 4611 Y55F3AM.1 Probable 28S ribosomal protein S25, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9N361]

Genes with expression patterns similar to Y55F3AM.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y55F3AM.1 mrps-25 4611 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable 28S ribosomal protein S25, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9N361]
2. Y54H5A.2 Y54H5A.2 2168 7.641 0.928 0.926 0.968 0.926 0.960 0.983 0.982 0.968
3. D2096.8 nap-1 59459 7.612 0.942 0.931 0.947 0.931 0.966 0.970 0.952 0.973 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
4. D2023.5 mpst-1 10328 7.608 0.915 0.925 0.951 0.925 0.992 0.979 0.960 0.961 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
5. R13A5.12 lpd-7 10476 7.587 0.908 0.940 0.963 0.940 0.955 0.994 0.937 0.950 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
6. T28D9.10 snr-3 9995 7.582 0.921 0.914 0.961 0.914 0.983 0.996 0.949 0.944 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
7. Y40G12A.1 ubh-3 4142 7.566 0.938 0.899 0.957 0.899 0.980 0.981 0.957 0.955 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
8. C03D6.8 rpl-24.2 5932 7.558 0.911 0.935 0.887 0.935 0.960 0.983 0.965 0.982 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
9. Y54E10A.11 Y54E10A.11 2415 7.55 0.940 0.914 0.946 0.914 0.974 0.979 0.935 0.948 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
10. F59A2.3 cri-3 15077 7.544 0.939 0.904 0.937 0.904 0.967 0.996 0.945 0.952 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
11. T13H5.5 mrps-18B 3430 7.543 0.909 0.921 0.950 0.921 0.971 0.988 0.942 0.941 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
12. C30C11.1 mrpl-32 5238 7.542 0.904 0.953 0.958 0.953 0.961 0.972 0.914 0.927 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
13. W08E3.1 snr-2 14849 7.539 0.933 0.899 0.948 0.899 0.977 0.977 0.943 0.963 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
14. T03D8.2 mrps-12 8253 7.537 0.928 0.914 0.971 0.914 0.957 0.979 0.937 0.937 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
15. C08F8.1 pfd-1 10199 7.536 0.927 0.926 0.950 0.926 0.974 0.970 0.937 0.926 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
16. C06A1.5 rpb-6 7515 7.528 0.927 0.895 0.951 0.895 0.979 0.981 0.940 0.960 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
17. C15H11.9 rrbs-1 9177 7.526 0.908 0.900 0.961 0.900 0.968 0.990 0.937 0.962 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
18. F13G3.11 mrpl-13 6024 7.525 0.906 0.920 0.933 0.920 0.976 0.976 0.951 0.943 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
19. C14A4.14 mrps-22 7966 7.521 0.934 0.905 0.954 0.905 0.952 0.987 0.932 0.952 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
20. C49H3.10 xpo-3 9101 7.517 0.948 0.914 0.949 0.914 0.939 0.985 0.946 0.922 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
21. B0261.4 mrpl-47 8210 7.517 0.927 0.919 0.941 0.919 0.958 0.964 0.927 0.962 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
22. Y73B6BL.32 lsm-8 11002 7.515 0.935 0.936 0.956 0.936 0.972 0.946 0.919 0.915 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
23. Y53C12B.3 nos-3 20231 7.513 0.915 0.912 0.924 0.912 0.973 0.971 0.945 0.961 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
24. C56C10.8 icd-1 89788 7.513 0.918 0.945 0.953 0.945 0.921 0.939 0.939 0.953 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
25. C05C8.5 C05C8.5 2655 7.511 0.926 0.874 0.950 0.874 0.968 0.986 0.973 0.960
26. W06E11.4 sbds-1 6701 7.509 0.920 0.908 0.968 0.908 0.985 0.988 0.923 0.909 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
27. K08F4.2 gtbp-1 25222 7.509 0.914 0.893 0.940 0.893 0.976 0.986 0.948 0.959 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
28. B0205.11 mrpl-9 9162 7.508 0.940 0.914 0.955 0.914 0.969 0.957 0.934 0.925 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
29. Y37D8A.18 mrps-10 4551 7.507 0.926 0.906 0.966 0.906 0.988 0.985 0.943 0.887 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
30. F56B3.8 mrpl-2 3195 7.507 0.924 0.903 0.942 0.903 0.977 0.976 0.929 0.953 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
31. Y39B6A.35 tgt-2 2364 7.504 0.947 0.882 0.963 0.882 0.972 0.960 0.961 0.937 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
32. T01E8.6 mrps-14 9328 7.501 0.946 0.905 0.952 0.905 0.971 0.980 0.907 0.935 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
33. F21C3.4 rde-2 6286 7.5 0.904 0.891 0.944 0.891 0.959 0.991 0.956 0.964
34. Y116A8C.42 snr-1 17062 7.5 0.935 0.894 0.933 0.894 0.974 0.979 0.959 0.932 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
35. T24H7.1 phb-2 28775 7.497 0.940 0.901 0.945 0.901 0.937 0.985 0.932 0.956 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
36. Y50D7A.9 taco-1 5949 7.497 0.930 0.872 0.948 0.872 0.974 0.985 0.962 0.954 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
37. Y54E5A.6 Y54E5A.6 770 7.495 0.938 0.882 0.946 0.882 0.970 0.992 0.920 0.965
38. Y62E10A.11 mdt-9 5971 7.493 0.935 0.916 0.958 0.916 0.965 0.979 0.931 0.893 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
39. Y49E10.15 snr-6 8505 7.492 0.952 0.874 0.929 0.874 0.990 0.979 0.941 0.953 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
40. C01F6.8 icln-1 6586 7.491 0.897 0.913 0.930 0.913 0.962 0.992 0.951 0.933 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
41. F43C1.6 mrpl-21 2778 7.491 0.941 0.909 0.957 0.909 0.970 0.970 0.891 0.944 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
42. C34E10.11 mrps-26 4649 7.49 0.924 0.922 0.956 0.922 0.932 0.970 0.908 0.956 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
43. B0511.8 mrps-30 5050 7.489 0.932 0.921 0.929 0.921 0.940 0.978 0.935 0.933 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
44. Y113G7B.17 prmt-1 43709 7.486 0.905 0.913 0.943 0.913 0.956 0.941 0.948 0.967 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
45. C07H6.5 cgh-1 60576 7.486 0.912 0.912 0.908 0.912 0.966 0.973 0.968 0.935 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
46. F55H2.6 clu-1 21404 7.486 0.932 0.900 0.928 0.900 0.957 0.989 0.928 0.952 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
47. C26D10.1 ran-3 11111 7.483 0.915 0.911 0.955 0.911 0.956 0.990 0.936 0.909 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
48. ZC410.2 mppb-1 3991 7.483 0.905 0.880 0.966 0.880 0.977 0.964 0.960 0.951 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
49. C26B2.6 elpc-4 3600 7.483 0.938 0.910 0.940 0.910 0.970 0.974 0.918 0.923 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
50. C47B2.9 C47B2.9 4096 7.48 0.935 0.900 0.937 0.900 0.960 0.981 0.958 0.909
51. T02G5.9 kars-1 9763 7.48 0.928 0.901 0.956 0.901 0.961 0.981 0.922 0.930 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
52. Y23H5B.6 Y23H5B.6 5886 7.476 0.932 0.900 0.930 0.900 0.944 0.982 0.929 0.959
53. Y37D8A.11 cec-7 8801 7.472 0.949 0.897 0.941 0.897 0.960 0.977 0.951 0.900 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
54. F33D4.8 mrps-24 2853 7.472 0.935 0.892 0.939 0.892 0.936 0.979 0.964 0.935 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
55. F26F4.11 rpb-8 7601 7.471 0.911 0.909 0.939 0.909 0.984 0.984 0.892 0.943 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
56. R09B3.5 mag-1 7496 7.47 0.897 0.900 0.925 0.900 0.980 0.973 0.940 0.955 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
57. Y48B6A.3 xrn-2 4881 7.468 0.899 0.897 0.956 0.897 0.933 0.978 0.941 0.967 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
58. T01C3.7 fib-1 23572 7.467 0.918 0.888 0.962 0.888 0.940 0.958 0.950 0.963 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
59. K01G5.1 rnf-113 4336 7.466 0.922 0.924 0.958 0.924 0.956 0.973 0.908 0.901 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
60. T07D4.4 ddx-19 7234 7.466 0.933 0.879 0.964 0.879 0.985 0.983 0.914 0.929 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
61. K01G5.2 hpl-2 6781 7.464 0.905 0.897 0.940 0.897 0.977 0.978 0.924 0.946 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
62. Y56A3A.19 Y56A3A.19 9680 7.464 0.908 0.882 0.928 0.882 0.981 0.986 0.935 0.962 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
63. C25A1.13 mrpl-34 3170 7.461 0.890 0.900 0.947 0.900 0.969 0.943 0.939 0.973 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492686]
64. C25A1.10 dao-5 18351 7.46 0.849 0.890 0.945 0.890 0.953 0.982 0.970 0.981 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
65. Y71F9B.4 snr-7 13542 7.46 0.920 0.860 0.933 0.860 0.982 0.990 0.938 0.977 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
66. F41G3.14 exos-8 2300 7.46 0.925 0.903 0.883 0.903 0.966 0.986 0.964 0.930 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
67. H27M09.2 rpb-5 4744 7.459 0.952 0.878 0.948 0.878 0.937 0.984 0.933 0.949 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
68. W06H3.3 ctps-1 8363 7.456 0.942 0.883 0.914 0.883 0.986 0.995 0.908 0.945 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
69. K01G5.4 ran-1 32379 7.453 0.889 0.902 0.928 0.902 0.941 0.979 0.959 0.953 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
70. T06D8.5 cox-15 3892 7.451 0.877 0.900 0.936 0.900 0.985 0.949 0.970 0.934 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]
71. C14A4.1 dohh-1 4890 7.448 0.953 0.861 0.939 0.861 0.970 0.992 0.946 0.926 Deoxyhypusine hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q17949]
72. F59A2.1 npp-9 34375 7.445 0.898 0.882 0.924 0.882 0.964 0.995 0.966 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
73. Y37E3.15 npp-13 7250 7.445 0.894 0.916 0.943 0.916 0.968 0.962 0.905 0.941 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
74. T23B12.3 mrps-2 5434 7.445 0.958 0.903 0.909 0.903 0.950 0.961 0.907 0.954 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
75. C27H6.2 ruvb-1 6291 7.444 0.929 0.892 0.908 0.892 0.951 0.962 0.948 0.962 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
76. M01E11.5 cey-3 20931 7.443 0.918 0.899 0.931 0.899 0.957 0.961 0.960 0.918 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
77. H20J04.5 pfd-2 8082 7.439 0.938 0.892 0.964 0.892 0.963 0.955 0.908 0.927 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
78. F09G2.9 attf-2 14771 7.439 0.923 0.898 0.911 0.898 0.947 0.969 0.923 0.970 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
79. ZK863.6 dpy-30 16177 7.436 0.880 0.894 0.970 0.894 0.976 0.935 0.955 0.932 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
80. C34D4.12 cyn-12 7363 7.436 0.938 0.880 0.927 0.880 0.975 0.980 0.903 0.953 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
81. T23G11.3 gld-1 41748 7.436 0.940 0.885 0.945 0.885 0.946 0.966 0.941 0.928 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
82. F23B2.13 rpb-12 2738 7.435 0.929 0.908 0.914 0.908 0.986 0.981 0.880 0.929 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_001294129]
83. C34E10.2 gop-2 5684 7.435 0.923 0.886 0.941 0.886 0.969 0.979 0.937 0.914 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
84. E02H1.8 mrpl-53 2704 7.435 0.917 0.901 0.951 0.901 0.982 0.981 0.941 0.861 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022058]
85. T21B10.1 mrpl-50 14595 7.434 0.907 0.894 0.955 0.894 0.988 0.983 0.900 0.913 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
86. Y54E10A.7 mrpl-17 2791 7.432 0.950 0.843 0.959 0.843 0.963 0.950 0.964 0.960 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_491114]
87. PAR2.1 mtss-1 4055 7.432 0.927 0.887 0.927 0.887 0.974 0.985 0.928 0.917 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
88. K12H4.4 K12H4.4 8351 7.43 0.916 0.880 0.907 0.880 0.960 0.990 0.927 0.970 Probable signal peptidase complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34525]
89. Y92H12BR.8 mrpl-15 6344 7.43 0.915 0.877 0.908 0.877 0.964 0.977 0.974 0.938 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
90. C05D11.10 mrps-17 4613 7.43 0.898 0.897 0.955 0.897 0.944 0.978 0.903 0.958 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
91. T25G3.4 T25G3.4 9394 7.423 0.926 0.895 0.944 0.895 0.961 0.981 0.955 0.866 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
92. ZK652.1 snr-5 5993 7.422 0.934 0.868 0.951 0.868 0.924 0.982 0.924 0.971 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
93. Y14H12B.2 Y14H12B.2 6496 7.421 0.874 0.904 0.926 0.904 0.932 0.976 0.934 0.971
94. Y111B2A.17 elpc-2 3504 7.421 0.896 0.894 0.968 0.894 0.918 0.965 0.943 0.943 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
95. F25H5.4 eef-2 34846 7.419 0.917 0.903 0.940 0.903 0.928 0.937 0.926 0.965 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
96. H21P03.1 mbf-1 25586 7.419 0.948 0.927 0.966 0.927 0.930 0.917 0.891 0.913 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
97. Y54E10BR.5 Y54E10BR.5 10734 7.419 0.931 0.875 0.930 0.875 0.965 0.980 0.963 0.900 Signal peptidase complex catalytic subunit SEC11 [Source:RefSeq peptide;Acc:NP_491092]
98. F58B3.5 mars-1 6729 7.418 0.921 0.875 0.968 0.875 0.975 0.982 0.922 0.900 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
99. F29C4.6 tut-1 5637 7.418 0.947 0.914 0.958 0.914 0.962 0.973 0.853 0.897 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
100. C09D4.5 rpl-19 56944 7.417 0.918 0.937 0.963 0.937 0.910 0.929 0.894 0.929 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA