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Results for F28D1.1

Gene ID Gene Name Reads Transcripts Annotation
F28D1.1 wdr-46 4050 F28D1.1 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]

Genes with expression patterns similar to F28D1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28D1.1 wdr-46 4050 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
2. K09H9.6 lpd-6 5459 7.687 0.968 0.955 0.948 0.955 0.992 0.934 0.971 0.964 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
3. F14B4.3 rpoa-2 7549 7.685 0.941 0.955 0.957 0.955 0.977 0.963 0.981 0.956 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
4. Y47D3A.26 smc-3 6256 7.667 0.933 0.974 0.958 0.974 0.974 0.954 0.944 0.956 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
5. C04G2.6 dis-3 5048 7.645 0.970 0.954 0.939 0.954 0.946 0.957 0.978 0.947 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
6. C34E10.2 gop-2 5684 7.644 0.932 0.955 0.972 0.955 0.972 0.972 0.929 0.957 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
7. F09F7.3 rpc-2 9751 7.637 0.943 0.934 0.957 0.934 0.987 0.964 0.970 0.948 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
8. C26D10.1 ran-3 11111 7.636 0.913 0.972 0.953 0.972 0.931 0.944 0.975 0.976 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
9. C07E3.2 pro-2 4193 7.615 0.930 0.938 0.946 0.938 0.990 0.967 0.977 0.929 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
10. C15H11.9 rrbs-1 9177 7.612 0.936 0.949 0.932 0.949 0.986 0.962 0.980 0.918 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
11. B0035.12 sart-3 7188 7.61 0.958 0.941 0.934 0.941 0.987 0.952 0.962 0.935 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
12. Y14H12B.2 Y14H12B.2 6496 7.604 0.951 0.947 0.941 0.947 0.994 0.952 0.959 0.913
13. T28D9.2 rsp-5 6460 7.601 0.933 0.959 0.948 0.959 0.979 0.954 0.965 0.904 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
14. Y71G12B.9 lin-65 7476 7.6 0.949 0.946 0.950 0.946 0.984 0.925 0.968 0.932 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
15. Y41D4B.19 npp-8 12992 7.6 0.939 0.956 0.943 0.956 0.957 0.930 0.974 0.945 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
16. T23G11.3 gld-1 41748 7.598 0.907 0.957 0.928 0.957 0.973 0.959 0.959 0.958 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
17. C25A1.10 dao-5 18351 7.597 0.922 0.952 0.943 0.952 0.992 0.952 0.970 0.914 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
18. Y53C12B.3 nos-3 20231 7.596 0.956 0.942 0.935 0.942 0.967 0.944 0.976 0.934 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
19. F55F8.3 F55F8.3 2107 7.596 0.910 0.944 0.958 0.944 0.993 0.926 0.964 0.957 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
20. Y37D8A.11 cec-7 8801 7.588 0.946 0.957 0.962 0.957 0.983 0.948 0.983 0.852 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
21. F55A12.8 nath-10 4253 7.586 0.915 0.949 0.930 0.949 0.984 0.961 0.942 0.956 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
22. F26B1.3 ima-2 18826 7.583 0.910 0.942 0.919 0.942 0.990 0.927 0.980 0.973 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
23. F18A1.8 pid-1 3751 7.583 0.909 0.944 0.959 0.944 0.991 0.959 0.947 0.930 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
24. Y23H5B.6 Y23H5B.6 5886 7.583 0.943 0.955 0.962 0.955 0.973 0.939 0.962 0.894
25. F59A2.1 npp-9 34375 7.582 0.961 0.942 0.918 0.942 0.978 0.945 0.979 0.917 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
26. C23G10.8 C23G10.8 4642 7.58 0.892 0.940 0.931 0.940 0.965 0.970 0.975 0.967
27. Y45G5AM.8 coh-4 2525 7.579 0.905 0.908 0.967 0.908 0.970 0.977 0.982 0.962 COHesin family [Source:RefSeq peptide;Acc:NP_504161]
28. C41C4.6 ulp-4 13338 7.578 0.933 0.956 0.966 0.956 0.975 0.911 0.945 0.936 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
29. Y116A8C.42 snr-1 17062 7.573 0.933 0.957 0.949 0.957 0.975 0.907 0.975 0.920 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
30. K08F4.2 gtbp-1 25222 7.57 0.941 0.963 0.936 0.963 0.957 0.953 0.950 0.907 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
31. F52F12.4 lsl-1 4055 7.569 0.912 0.956 0.935 0.956 0.991 0.919 0.949 0.951 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
32. C30H7.2 C30H7.2 14364 7.569 0.912 0.933 0.954 0.933 0.951 0.981 0.973 0.932
33. C05D2.5 xnd-1 5516 7.568 0.940 0.934 0.923 0.934 0.966 0.965 0.966 0.940 X chromosome NonDisjunction factor [Source:RefSeq peptide;Acc:NP_498207]
34. B0414.5 cpb-3 11584 7.558 0.935 0.936 0.917 0.936 0.962 0.971 0.946 0.955 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
35. ZK1128.6 ttll-4 6059 7.556 0.922 0.949 0.917 0.949 0.986 0.953 0.962 0.918 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
36. Y54E5A.6 Y54E5A.6 770 7.556 0.904 0.940 0.957 0.940 0.973 0.938 0.955 0.949
37. F10E9.7 F10E9.7 1842 7.555 0.930 0.918 0.948 0.918 0.968 0.962 0.965 0.946
38. T23F6.4 rbd-1 5825 7.555 0.883 0.962 0.963 0.962 0.975 0.972 0.938 0.900 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
39. F41H10.10 htp-1 6425 7.554 0.886 0.945 0.928 0.945 0.977 0.951 0.970 0.952 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
40. F53A2.4 nud-1 7818 7.553 0.896 0.918 0.971 0.918 0.981 0.972 0.942 0.955 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
41. Y113G7B.17 prmt-1 43709 7.551 0.934 0.940 0.953 0.940 0.983 0.917 0.979 0.905 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
42. M01E11.5 cey-3 20931 7.55 0.916 0.909 0.938 0.909 0.971 0.990 0.959 0.958 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
43. K04C2.3 K04C2.3 23540 7.548 0.933 0.909 0.934 0.909 0.974 0.985 0.966 0.938
44. W06E11.4 sbds-1 6701 7.546 0.930 0.932 0.954 0.932 0.959 0.957 0.938 0.944 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
45. Y48B6A.3 xrn-2 4881 7.545 0.913 0.929 0.915 0.929 0.989 0.962 0.962 0.946 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
46. Y37D8A.9 mrg-1 14369 7.542 0.923 0.951 0.912 0.951 0.970 0.929 0.977 0.929 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
47. C18E9.3 szy-20 6819 7.542 0.920 0.920 0.941 0.920 0.960 0.965 0.950 0.966 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
48. C06A1.5 rpb-6 7515 7.542 0.947 0.950 0.940 0.950 0.959 0.905 0.969 0.922 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
49. C16A3.3 let-716 8448 7.536 0.886 0.940 0.956 0.940 0.989 0.935 0.962 0.928
50. ZC376.5 trm-1 2057 7.536 0.915 0.958 0.936 0.958 0.976 0.946 0.904 0.943 tRNA (guanine(26)-N(2))-dimethyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q23270]
51. F26H9.1 prom-1 6444 7.53 0.910 0.948 0.912 0.948 0.969 0.964 0.961 0.918 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
52. F32E10.1 nol-10 3225 7.529 0.895 0.951 0.901 0.951 0.957 0.954 0.974 0.946 NucleOLar protein [Source:RefSeq peptide;Acc:NP_501233]
53. F21C3.4 rde-2 6286 7.526 0.920 0.942 0.942 0.942 0.960 0.950 0.968 0.902
54. W06H3.3 ctps-1 8363 7.524 0.880 0.971 0.938 0.971 0.954 0.928 0.940 0.942 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
55. F32H2.1 snpc-4 7581 7.52 0.954 0.943 0.938 0.943 0.954 0.925 0.946 0.917 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
56. B0414.3 hil-5 10816 7.518 0.934 0.950 0.961 0.950 0.971 0.919 0.964 0.869 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
57. R06F6.1 cdl-1 14167 7.517 0.878 0.936 0.899 0.936 0.968 0.969 0.963 0.968 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
58. T01C3.7 fib-1 23572 7.517 0.925 0.946 0.938 0.946 0.984 0.927 0.970 0.881 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
59. ZK1251.9 dcaf-1 10926 7.516 0.959 0.926 0.923 0.926 0.968 0.890 0.973 0.951 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
60. T21B10.7 cct-2 13999 7.516 0.937 0.961 0.948 0.961 0.954 0.943 0.910 0.902 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
61. Y39E4B.2 snpc-1.2 5800 7.515 0.939 0.923 0.907 0.923 0.993 0.951 0.958 0.921 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
62. C50F2.3 C50F2.3 3084 7.515 0.952 0.960 0.896 0.960 0.952 0.971 0.926 0.898
63. T09E8.2 him-17 4153 7.515 0.908 0.920 0.927 0.920 0.957 0.984 0.934 0.965 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
64. C05C8.5 C05C8.5 2655 7.515 0.935 0.904 0.898 0.904 0.979 0.974 0.968 0.953
65. C07H6.5 cgh-1 60576 7.513 0.946 0.890 0.934 0.890 0.961 0.985 0.960 0.947 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
66. T25G3.4 T25G3.4 9394 7.51 0.944 0.935 0.924 0.935 0.978 0.922 0.976 0.896 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
67. T23H2.1 npp-12 12425 7.508 0.934 0.950 0.948 0.950 0.952 0.916 0.938 0.920 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
68. F53F4.12 F53F4.12 2683 7.508 0.918 0.940 0.933 0.940 0.967 0.958 0.971 0.881
69. Y75B8A.22 tim-1 2124 7.504 0.918 0.953 0.907 0.953 0.948 0.940 0.953 0.932 Protein timeless homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EDN3]
70. F10G7.1 tag-151 9031 7.503 0.899 0.932 0.948 0.932 0.983 0.938 0.926 0.945 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
71. W01A8.5 tofu-5 5678 7.499 0.870 0.936 0.895 0.936 0.975 0.969 0.948 0.970 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
72. Y39B6A.35 tgt-2 2364 7.499 0.908 0.925 0.916 0.925 0.940 0.992 0.938 0.955 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
73. H27M09.2 rpb-5 4744 7.494 0.902 0.921 0.941 0.921 0.990 0.950 0.976 0.893 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
74. D2096.8 nap-1 59459 7.493 0.893 0.933 0.919 0.933 0.982 0.938 0.964 0.931 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
75. Y110A7A.16 elpc-1 3641 7.492 0.907 0.942 0.960 0.942 0.949 0.904 0.950 0.938 Elongator complex protein 1 [Source:RefSeq peptide;Acc:NP_491524]
76. Y18D10A.17 car-1 87364 7.492 0.926 0.942 0.909 0.942 0.949 0.954 0.921 0.949 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
77. F56D2.6 ddx-15 12282 7.492 0.956 0.955 0.943 0.955 0.954 0.902 0.913 0.914 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
78. F02A9.6 glp-1 5613 7.491 0.886 0.950 0.941 0.950 0.986 0.901 0.976 0.901
79. W08E3.1 snr-2 14849 7.491 0.912 0.953 0.955 0.953 0.908 0.920 0.942 0.948 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
80. C25A1.4 C25A1.4 15507 7.49 0.878 0.967 0.921 0.967 0.970 0.912 0.948 0.927
81. K01G5.2 hpl-2 6781 7.489 0.937 0.935 0.960 0.935 0.946 0.916 0.949 0.911 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
82. C26E6.4 rpb-2 7053 7.488 0.954 0.955 0.934 0.955 0.949 0.904 0.929 0.908 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
83. E02H1.3 tag-124 2189 7.488 0.928 0.926 0.932 0.926 0.953 0.968 0.912 0.943 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
84. F46F11.2 cey-2 47143 7.488 0.926 0.891 0.917 0.891 0.948 0.977 0.960 0.978 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
85. F44E2.8 F44E2.8 12814 7.487 0.936 0.970 0.942 0.970 0.950 0.906 0.902 0.911
86. ZK381.1 him-3 4913 7.486 0.916 0.946 0.925 0.946 0.957 0.936 0.921 0.939 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
87. C14A4.14 mrps-22 7966 7.486 0.870 0.963 0.903 0.963 0.930 0.962 0.969 0.926 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
88. Y40B1B.6 spr-5 6252 7.485 0.927 0.926 0.928 0.926 0.971 0.960 0.937 0.910 Probable lysine-specific histone demethylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWP6]
89. F58A4.4 pri-1 1493 7.485 0.923 0.944 0.912 0.944 0.966 0.937 0.974 0.885 DNA primase small subunit [Source:UniProtKB/Swiss-Prot;Acc:P34471]
90. R53.2 dtmk-1 6821 7.485 0.898 0.945 0.947 0.945 0.940 0.942 0.910 0.958 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
91. C02F5.4 cids-1 3125 7.484 0.908 0.896 0.919 0.896 0.975 0.970 0.955 0.965 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
92. Y57A10A.25 parn-2 2634 7.482 0.900 0.945 0.925 0.945 0.965 0.965 0.973 0.864 PARN (Poly(A)-specific RiboNuclease) homolog [Source:RefSeq peptide;Acc:NP_496602]
93. F57B10.5 F57B10.5 10176 7.482 0.934 0.903 0.955 0.903 0.965 0.923 0.947 0.952
94. T28D9.10 snr-3 9995 7.481 0.909 0.936 0.928 0.936 0.954 0.962 0.965 0.891 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
95. T10G3.6 gut-2 3374 7.481 0.868 0.949 0.946 0.949 0.955 0.907 0.968 0.939
96. F44G4.4 tdp-1 3335 7.48 0.897 0.927 0.860 0.927 0.982 0.972 0.970 0.945 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
97. H43I07.2 rpac-40 3342 7.477 0.909 0.912 0.958 0.912 0.933 0.962 0.938 0.953 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
98. Y48C3A.7 mac-1 2197 7.476 0.890 0.933 0.900 0.933 0.971 0.957 0.971 0.921 Member of AAA family binding CED-4 [Source:RefSeq peptide;Acc:NP_496814]
99. H02I12.1 cbd-1 54348 7.476 0.910 0.910 0.883 0.910 0.949 0.968 0.965 0.981 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
100. Y111B2A.17 elpc-2 3504 7.476 0.897 0.923 0.948 0.923 0.980 0.963 0.969 0.873 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA