C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F23B2.13

Gene ID Gene Name Reads Transcripts Annotation
F23B2.13 rpb-12 2738 F23B2.13a, F23B2.13b RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_001294129]

Genes with expression patterns similar to F23B2.13

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F23B2.13 rpb-12 2738 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_001294129]
2. W06H3.3 ctps-1 8363 7.598 0.969 0.934 0.900 0.934 0.973 0.986 0.926 0.976 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
3. R09B3.5 mag-1 7496 7.572 0.976 0.916 0.937 0.916 0.983 0.978 0.929 0.937 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
4. F32H2.1 snpc-4 7581 7.57 0.967 0.909 0.929 0.909 0.938 0.974 0.961 0.983 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
5. K01G5.4 ran-1 32379 7.568 0.965 0.930 0.963 0.930 0.931 0.975 0.933 0.941 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
6. T28D9.2 rsp-5 6460 7.56 0.958 0.924 0.923 0.924 0.967 0.982 0.935 0.947 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
7. W06E11.4 sbds-1 6701 7.559 0.940 0.934 0.935 0.934 0.986 0.974 0.936 0.920 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
8. K12C11.2 smo-1 12784 7.551 0.972 0.919 0.954 0.919 0.933 0.954 0.937 0.963 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
9. Y54E5A.6 Y54E5A.6 770 7.547 0.951 0.921 0.916 0.921 0.960 0.982 0.959 0.937
10. Y41D4B.19 npp-8 12992 7.546 0.935 0.919 0.927 0.919 0.971 0.984 0.936 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
11. C48B4.11 C48B4.11 4384 7.54 0.959 0.916 0.952 0.916 0.922 0.968 0.959 0.948
12. Y37E3.3 rpb-10 4051 7.54 0.983 0.922 0.897 0.922 0.975 0.983 0.919 0.939 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
13. F23F1.1 nfyc-1 9983 7.537 0.962 0.900 0.943 0.900 0.969 0.980 0.947 0.936 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
14. Y116A8C.42 snr-1 17062 7.537 0.966 0.910 0.929 0.910 0.975 0.977 0.927 0.943 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
15. C06A1.5 rpb-6 7515 7.536 0.965 0.890 0.936 0.890 0.985 0.975 0.943 0.952 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
16. T28D9.10 snr-3 9995 7.533 0.980 0.921 0.899 0.921 0.979 0.977 0.890 0.966 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
17. T01E8.6 mrps-14 9328 7.527 0.974 0.925 0.887 0.925 0.971 0.984 0.912 0.949 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
18. W08E3.1 snr-2 14849 7.526 0.969 0.923 0.922 0.923 0.977 0.981 0.891 0.940 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
19. Y53C12B.3 nos-3 20231 7.525 0.943 0.929 0.892 0.929 0.965 0.947 0.946 0.974 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
20. T21B10.1 mrpl-50 14595 7.523 0.957 0.918 0.915 0.918 0.970 0.968 0.935 0.942 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
21. W01G7.3 rpb-11 7826 7.516 0.966 0.916 0.940 0.916 0.929 0.986 0.933 0.930 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
22. PAR2.1 mtss-1 4055 7.512 0.960 0.936 0.907 0.936 0.959 0.964 0.916 0.934 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
23. Y62E10A.11 mdt-9 5971 7.509 0.974 0.923 0.931 0.923 0.972 0.965 0.902 0.919 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
24. B0035.3 B0035.3 4118 7.506 0.942 0.928 0.898 0.928 0.948 0.976 0.944 0.942
25. Y55F3AM.12 dcap-1 8679 7.505 0.958 0.890 0.938 0.890 0.975 0.974 0.918 0.962 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
26. R13A5.12 lpd-7 10476 7.504 0.934 0.917 0.904 0.917 0.946 0.977 0.935 0.974 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
27. F53F4.3 tbcb-1 6442 7.504 0.975 0.917 0.929 0.917 0.987 0.940 0.881 0.958 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
28. F26F4.11 rpb-8 7601 7.503 0.968 0.897 0.942 0.897 0.972 0.978 0.897 0.952 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
29. D2023.5 mpst-1 10328 7.501 0.966 0.918 0.894 0.918 0.988 0.978 0.898 0.941 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
30. T21B10.7 cct-2 13999 7.501 0.961 0.928 0.909 0.928 0.964 0.961 0.910 0.940 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
31. T06A10.4 lsy-13 7631 7.5 0.965 0.925 0.912 0.925 0.940 0.992 0.947 0.894
32. B0261.4 mrpl-47 8210 7.499 0.934 0.933 0.907 0.933 0.947 0.962 0.940 0.943 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
33. C34E10.2 gop-2 5684 7.498 0.969 0.905 0.931 0.905 0.965 0.943 0.922 0.958 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
34. B0464.7 baf-1 10161 7.497 0.961 0.908 0.941 0.908 0.954 0.951 0.928 0.946 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
35. C25A1.4 C25A1.4 15507 7.496 0.957 0.922 0.926 0.922 0.975 0.976 0.897 0.921
36. F10G7.3 unc-85 5206 7.494 0.952 0.909 0.881 0.909 0.978 0.983 0.934 0.948 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
37. C26E6.4 rpb-2 7053 7.491 0.946 0.907 0.912 0.907 0.931 0.983 0.937 0.968 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
38. ZK328.2 eftu-2 7040 7.491 0.900 0.922 0.945 0.922 0.959 0.961 0.915 0.967 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
39. Y17G7A.1 hmg-12 29989 7.49 0.960 0.913 0.947 0.913 0.928 0.978 0.924 0.927 HMG [Source:RefSeq peptide;Acc:NP_496544]
40. K01G5.2 hpl-2 6781 7.489 0.944 0.925 0.941 0.925 0.964 0.983 0.870 0.937 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
41. ZC434.5 ears-1 4725 7.488 0.912 0.926 0.929 0.926 0.951 0.965 0.932 0.947 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
42. Y73B6BL.32 lsm-8 11002 7.487 0.981 0.926 0.932 0.926 0.964 0.966 0.848 0.944 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
43. T04A8.11 mrpl-16 5998 7.485 0.965 0.915 0.892 0.915 0.944 0.967 0.942 0.945 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
44. F58B3.5 mars-1 6729 7.485 0.958 0.933 0.893 0.933 0.976 0.985 0.913 0.894 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
45. C08F8.1 pfd-1 10199 7.483 0.969 0.917 0.909 0.917 0.969 0.965 0.926 0.911 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
46. C26D10.1 ran-3 11111 7.483 0.926 0.926 0.939 0.926 0.960 0.978 0.883 0.945 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
47. Y47D3A.26 smc-3 6256 7.482 0.910 0.926 0.935 0.926 0.961 0.962 0.912 0.950 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
48. C33H5.12 rsp-6 23342 7.481 0.944 0.913 0.928 0.913 0.934 0.965 0.942 0.942 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
49. F42A6.7 hrp-1 28201 7.48 0.962 0.913 0.930 0.913 0.943 0.944 0.931 0.944 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
50. K08F4.2 gtbp-1 25222 7.48 0.953 0.901 0.917 0.901 0.969 0.950 0.921 0.968 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
51. F52C9.7 mog-3 9880 7.479 0.932 0.899 0.927 0.899 0.972 0.976 0.915 0.959 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
52. Y71G12B.9 lin-65 7476 7.478 0.918 0.914 0.937 0.914 0.959 0.989 0.910 0.937 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
53. F56F3.1 ifet-1 25772 7.476 0.947 0.904 0.918 0.904 0.953 0.986 0.894 0.970 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
54. ZK381.1 him-3 4913 7.476 0.970 0.936 0.905 0.936 0.931 0.983 0.896 0.919 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
55. Y37E3.15 npp-13 7250 7.475 0.964 0.905 0.924 0.905 0.961 0.962 0.903 0.951 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
56. T02G5.9 kars-1 9763 7.475 0.950 0.896 0.914 0.896 0.958 0.990 0.919 0.952 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
57. T23H2.1 npp-12 12425 7.473 0.963 0.896 0.930 0.896 0.948 0.989 0.911 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
58. K02F3.11 rnp-5 6205 7.472 0.937 0.901 0.961 0.901 0.931 0.996 0.917 0.928 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
59. Y37D8A.18 mrps-10 4551 7.47 0.951 0.900 0.913 0.900 0.984 0.986 0.942 0.894 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
60. F32A5.7 lsm-4 3785 7.47 0.974 0.864 0.953 0.864 0.955 0.973 0.943 0.944 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
61. C15H11.9 rrbs-1 9177 7.47 0.916 0.909 0.877 0.909 0.967 0.971 0.954 0.967 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
62. F59A2.1 npp-9 34375 7.468 0.952 0.894 0.931 0.894 0.948 0.987 0.909 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
63. H12I13.4 fbf-1 5587 7.468 0.941 0.925 0.932 0.925 0.972 0.944 0.933 0.896 Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
64. C49H3.4 C49H3.4 648 7.468 0.977 0.845 0.940 0.845 0.978 0.975 0.937 0.971
65. C27H6.2 ruvb-1 6291 7.466 0.939 0.921 0.937 0.921 0.954 0.932 0.955 0.907 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
66. Y54E10A.11 Y54E10A.11 2415 7.466 0.954 0.910 0.907 0.910 0.964 0.955 0.930 0.936 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
67. Y51H1A.6 mcd-1 3250 7.466 0.929 0.909 0.941 0.909 0.958 0.981 0.917 0.922 Modifier of Cell Death phenotype [Source:RefSeq peptide;Acc:NP_001254412]
68. F10E9.7 F10E9.7 1842 7.466 0.965 0.869 0.943 0.869 0.952 0.963 0.933 0.972
69. Y18D10A.1 attf-6 6942 7.465 0.858 0.940 0.924 0.940 0.947 0.953 0.949 0.954 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
70. T25G3.3 T25G3.3 7285 7.465 0.953 0.893 0.897 0.893 0.963 0.967 0.951 0.948
71. F21C3.4 rde-2 6286 7.464 0.955 0.888 0.940 0.888 0.946 0.970 0.933 0.944
72. C01F6.8 icln-1 6586 7.462 0.969 0.921 0.903 0.921 0.969 0.988 0.896 0.895 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
73. K01G5.1 rnf-113 4336 7.462 0.933 0.918 0.912 0.918 0.943 0.943 0.963 0.932 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
74. Y71F9B.4 snr-7 13542 7.461 0.970 0.897 0.903 0.897 0.978 0.968 0.919 0.929 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
75. C47B2.9 C47B2.9 4096 7.461 0.976 0.919 0.890 0.919 0.950 0.992 0.874 0.941
76. R07E5.14 rnp-4 11659 7.46 0.974 0.872 0.923 0.872 0.987 0.968 0.915 0.949 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
77. F28B3.8 imb-1 7515 7.459 0.925 0.892 0.936 0.892 0.961 0.965 0.944 0.944 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
78. B0414.3 hil-5 10816 7.458 0.921 0.928 0.942 0.928 0.951 0.951 0.911 0.926 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
79. T03D8.2 mrps-12 8253 7.458 0.913 0.900 0.903 0.900 0.949 0.989 0.942 0.962 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
80. B0252.4 cyn-10 3765 7.454 0.953 0.898 0.925 0.898 0.951 0.941 0.918 0.970 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
81. Y39G10AR.7 ekl-7 7072 7.454 0.940 0.886 0.909 0.886 0.940 0.989 0.953 0.951
82. R53.2 dtmk-1 6821 7.453 0.955 0.907 0.941 0.907 0.953 0.986 0.876 0.928 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
83. C34D4.12 cyn-12 7363 7.453 0.957 0.898 0.940 0.898 0.960 0.960 0.928 0.912 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
84. W02B12.3 rsp-1 9235 7.451 0.974 0.895 0.952 0.895 0.907 0.984 0.926 0.918 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
85. T10F2.4 prp-19 11298 7.451 0.959 0.915 0.951 0.915 0.918 0.947 0.870 0.976 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
86. Y37D8A.11 cec-7 8801 7.451 0.944 0.903 0.942 0.903 0.950 0.958 0.928 0.923 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
87. C49H3.10 xpo-3 9101 7.451 0.926 0.907 0.947 0.907 0.919 0.975 0.929 0.941 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
88. C14A4.14 mrps-22 7966 7.45 0.927 0.903 0.890 0.903 0.954 0.968 0.953 0.952 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
89. R13F6.10 cra-1 11610 7.448 0.933 0.929 0.899 0.929 0.929 0.969 0.902 0.958 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
90. T19B4.2 npp-7 13073 7.447 0.955 0.887 0.907 0.887 0.933 0.987 0.918 0.973 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
91. Y37D8A.9 mrg-1 14369 7.446 0.937 0.889 0.897 0.889 0.973 0.983 0.914 0.964 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
92. ZC410.2 mppb-1 3991 7.446 0.963 0.888 0.938 0.888 0.979 0.962 0.868 0.960 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
93. F56D12.5 vig-1 42594 7.446 0.933 0.915 0.886 0.915 0.950 0.960 0.935 0.952 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
94. K09H9.6 lpd-6 5459 7.446 0.921 0.918 0.915 0.918 0.944 0.979 0.917 0.934 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
95. T13H5.5 mrps-18B 3430 7.443 0.954 0.895 0.867 0.895 0.971 0.983 0.946 0.932 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
96. F28H1.3 aars-2 13537 7.443 0.949 0.903 0.904 0.903 0.952 0.970 0.920 0.942 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
97. C17G10.2 C17G10.2 2288 7.442 0.984 0.911 0.948 0.911 0.933 0.931 0.884 0.940
98. C53D5.6 imb-3 28921 7.441 0.950 0.927 0.938 0.927 0.875 0.915 0.942 0.967 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
99. H20J04.8 mog-2 3084 7.439 0.981 0.899 0.914 0.899 0.944 0.982 0.872 0.948 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
100. C04G2.6 dis-3 5048 7.438 0.927 0.922 0.930 0.922 0.981 0.956 0.932 0.868 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]

There are 1713 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA