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Results for ZK856.10

Gene ID Gene Name Reads Transcripts Annotation
ZK856.10 rpc-25 3282 ZK856.10 RNA Polymerase, Class III (C) [Source:RefSeq peptide;Acc:NP_505625]

Genes with expression patterns similar to ZK856.10

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK856.10 rpc-25 3282 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA Polymerase, Class III (C) [Source:RefSeq peptide;Acc:NP_505625]
2. T23B12.2 mrpl-4 3820 7.696 0.927 0.964 0.961 0.964 0.964 0.987 0.974 0.955 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_505181]
3. C05C8.5 C05C8.5 2655 7.644 0.927 0.964 0.947 0.964 0.944 0.972 0.948 0.978
4. F21C3.4 rde-2 6286 7.63 0.937 0.962 0.949 0.962 0.924 0.964 0.952 0.980
5. R09B3.1 exo-3 4401 7.63 0.965 0.968 0.934 0.968 0.942 0.984 0.963 0.906 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
6. Y48B6A.3 xrn-2 4881 7.609 0.908 0.914 0.973 0.914 0.977 0.981 0.962 0.980 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
7. T28D9.10 snr-3 9995 7.606 0.956 0.964 0.972 0.964 0.897 0.961 0.959 0.933 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
8. F35D11.5 F35D11.5 14785 7.605 0.949 0.965 0.933 0.965 0.926 0.987 0.946 0.934
9. Y71F9B.4 snr-7 13542 7.601 0.977 0.964 0.932 0.964 0.909 0.943 0.939 0.973 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
10. Y111B2A.17 elpc-2 3504 7.596 0.902 0.960 0.953 0.960 0.968 0.970 0.933 0.950 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
11. F55A12.5 F55A12.5 6612 7.593 0.914 0.967 0.962 0.967 0.970 0.931 0.950 0.932
12. F53A2.4 nud-1 7818 7.589 0.937 0.978 0.939 0.978 0.920 0.979 0.957 0.901 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
13. T23G11.3 gld-1 41748 7.581 0.915 0.956 0.967 0.956 0.946 0.961 0.955 0.925 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
14. M01E11.5 cey-3 20931 7.576 0.915 0.959 0.942 0.959 0.944 0.980 0.957 0.920 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
15. Y14H12B.2 Y14H12B.2 6496 7.572 0.901 0.944 0.932 0.944 0.962 0.971 0.948 0.970
16. K08F4.2 gtbp-1 25222 7.567 0.927 0.950 0.949 0.950 0.900 0.953 0.977 0.961 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
17. C26B2.6 elpc-4 3600 7.563 0.911 0.965 0.936 0.965 0.943 0.964 0.933 0.946 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
18. R13A5.12 lpd-7 10476 7.562 0.924 0.950 0.949 0.950 0.923 0.962 0.951 0.953 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
19. Y54E10A.11 Y54E10A.11 2415 7.562 0.944 0.914 0.974 0.914 0.925 0.974 0.959 0.958 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
20. T05H4.11 T05H4.11 12835 7.561 0.889 0.959 0.916 0.959 0.946 0.987 0.955 0.950
21. K01G5.8 K01G5.8 4694 7.561 0.887 0.962 0.976 0.962 0.906 0.945 0.961 0.962
22. Y116A8C.42 snr-1 17062 7.558 0.948 0.960 0.961 0.960 0.916 0.911 0.967 0.935 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
23. D2023.5 mpst-1 10328 7.558 0.953 0.944 0.962 0.944 0.891 0.934 0.976 0.954 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
24. C48B6.3 C48B6.3 6610 7.555 0.925 0.950 0.943 0.950 0.942 0.955 0.973 0.917
25. Y40B1B.8 Y40B1B.8 4877 7.551 0.958 0.934 0.946 0.934 0.944 0.942 0.943 0.950
26. C34E10.2 gop-2 5684 7.55 0.918 0.955 0.929 0.955 0.921 0.987 0.948 0.937 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
27. K07A1.12 lin-53 15817 7.549 0.883 0.960 0.912 0.960 0.952 0.949 0.968 0.965 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
28. Y54E5A.6 Y54E5A.6 770 7.546 0.941 0.932 0.967 0.932 0.941 0.935 0.921 0.977
29. F59A2.1 npp-9 34375 7.543 0.889 0.952 0.949 0.952 0.956 0.946 0.968 0.931 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
30. Y18D10A.17 car-1 87364 7.543 0.912 0.943 0.950 0.943 0.949 0.970 0.952 0.924 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
31. Y53C12B.3 nos-3 20231 7.542 0.907 0.971 0.952 0.971 0.918 0.917 0.942 0.964 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
32. Y53C12B.2 Y53C12B.2 6115 7.542 0.933 0.952 0.933 0.952 0.962 0.950 0.937 0.923 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
33. E02H1.2 E02H1.2 2194 7.542 0.909 0.960 0.951 0.960 0.892 0.978 0.952 0.940 Uncharacterized GTP-binding protein E02H1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09523]
34. B0513.2 B0513.2 3641 7.539 0.874 0.939 0.958 0.939 0.931 0.986 0.945 0.967
35. Y92H12BR.8 mrpl-15 6344 7.539 0.939 0.943 0.945 0.943 0.900 0.948 0.974 0.947 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
36. C01F6.8 icln-1 6586 7.535 0.925 0.977 0.941 0.977 0.921 0.921 0.969 0.904 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
37. C34D4.12 cyn-12 7363 7.527 0.878 0.967 0.939 0.967 0.926 0.967 0.948 0.935 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
38. K04C2.3 K04C2.3 23540 7.527 0.868 0.949 0.944 0.949 0.930 0.973 0.955 0.959
39. Y57A10A.28 Y57A10A.28 4310 7.524 0.952 0.918 0.957 0.918 0.929 0.966 0.933 0.951
40. R07E5.14 rnp-4 11659 7.52 0.926 0.950 0.947 0.950 0.900 0.929 0.959 0.959 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
41. F09G2.9 attf-2 14771 7.519 0.887 0.957 0.917 0.957 0.923 0.955 0.960 0.963 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
42. F53F4.12 F53F4.12 2683 7.518 0.945 0.923 0.953 0.923 0.914 0.968 0.930 0.962
43. F01F1.8 cct-6 29460 7.516 0.935 0.946 0.945 0.946 0.898 0.957 0.952 0.937 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
44. Y40G12A.1 ubh-3 4142 7.516 0.928 0.941 0.973 0.941 0.867 0.949 0.957 0.960 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
45. Y62E10A.12 lsm-3 4322 7.514 0.909 0.915 0.957 0.915 0.920 0.972 0.944 0.982 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
46. Y39B6A.35 tgt-2 2364 7.513 0.902 0.951 0.924 0.951 0.893 0.977 0.963 0.952 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
47. W01A8.5 tofu-5 5678 7.508 0.872 0.960 0.928 0.960 0.922 0.978 0.938 0.950 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
48. F56D1.3 mrps-16 2309 7.507 0.947 0.934 0.937 0.934 0.938 0.966 0.950 0.901 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
49. Y54H5A.2 Y54H5A.2 2168 7.507 0.912 0.886 0.981 0.886 0.942 0.973 0.978 0.949
50. B0035.12 sart-3 7188 7.505 0.911 0.954 0.958 0.954 0.930 0.954 0.952 0.892 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
51. C06A1.5 rpb-6 7515 7.505 0.925 0.940 0.956 0.940 0.875 0.930 0.958 0.981 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
52. D2096.8 nap-1 59459 7.501 0.894 0.911 0.953 0.911 0.957 0.934 0.971 0.970 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
53. R06C7.5 adsl-1 3236 7.501 0.913 0.946 0.892 0.946 0.938 0.967 0.949 0.950 Adenylosuccinate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q21774]
54. C14A4.14 mrps-22 7966 7.498 0.927 0.955 0.955 0.955 0.864 0.954 0.918 0.970 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
55. B0205.9 B0205.9 3651 7.497 0.964 0.951 0.948 0.951 0.852 0.942 0.969 0.920
56. T25G3.4 T25G3.4 9394 7.496 0.896 0.961 0.975 0.961 0.936 0.927 0.956 0.884 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
57. F41G3.14 exos-8 2300 7.495 0.932 0.933 0.894 0.933 0.922 0.927 0.983 0.971 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
58. W02B12.11 W02B12.11 8336 7.494 0.934 0.905 0.912 0.905 0.967 0.977 0.971 0.923 N-acetyllactosamine synthase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGS9]
59. Y23H5B.6 Y23H5B.6 5886 7.493 0.903 0.961 0.908 0.961 0.940 0.937 0.919 0.964
60. C15H11.9 rrbs-1 9177 7.492 0.899 0.906 0.967 0.906 0.942 0.959 0.946 0.967 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
61. C08F8.1 pfd-1 10199 7.491 0.955 0.947 0.955 0.947 0.912 0.899 0.943 0.933 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
62. C07E3.2 pro-2 4193 7.491 0.830 0.956 0.944 0.956 0.948 0.957 0.965 0.935 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
63. C07H6.5 cgh-1 60576 7.491 0.858 0.940 0.930 0.940 0.940 0.967 0.972 0.944 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
64. W06E11.4 sbds-1 6701 7.487 0.884 0.963 0.959 0.963 0.894 0.950 0.924 0.950 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
65. H27M09.2 rpb-5 4744 7.487 0.912 0.917 0.949 0.917 0.940 0.950 0.942 0.960 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
66. C14A4.5 crn-5 1759 7.487 0.933 0.947 0.906 0.947 0.939 0.911 0.946 0.958 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
67. Y62E10A.11 mdt-9 5971 7.487 0.938 0.973 0.944 0.973 0.859 0.933 0.939 0.928 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
68. F10G7.1 tag-151 9031 7.486 0.883 0.953 0.970 0.953 0.937 0.933 0.929 0.928 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
69. F26F4.11 rpb-8 7601 7.485 0.961 0.944 0.935 0.944 0.903 0.937 0.909 0.952 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
70. F35G12.12 F35G12.12 5761 7.484 0.900 0.970 0.951 0.970 0.931 0.940 0.952 0.870
71. C18E9.3 szy-20 6819 7.483 0.939 0.958 0.934 0.958 0.915 0.955 0.937 0.887 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
72. K07C5.6 K07C5.6 7375 7.479 0.808 0.959 0.937 0.959 0.969 0.948 0.941 0.958 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
73. F43G9.5 cfim-1 9169 7.476 0.909 0.943 0.927 0.943 0.905 0.937 0.955 0.957 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
74. B0285.4 B0285.4 3474 7.475 0.926 0.959 0.899 0.959 0.959 0.929 0.955 0.889 Probable leucine carboxyl methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46554]
75. C30C11.1 mrpl-32 5238 7.475 0.951 0.947 0.980 0.947 0.889 0.863 0.938 0.960 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
76. F54B3.3 atad-3 9583 7.474 0.953 0.927 0.921 0.927 0.925 0.937 0.928 0.956 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
77. Y73B6BL.32 lsm-8 11002 7.473 0.946 0.954 0.972 0.954 0.920 0.854 0.950 0.923 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
78. Y50D7A.9 taco-1 5949 7.472 0.916 0.949 0.966 0.949 0.893 0.898 0.957 0.944 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
79. C25A1.10 dao-5 18351 7.471 0.854 0.911 0.951 0.911 0.949 0.951 0.966 0.978 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
80. F09F7.3 rpc-2 9751 7.471 0.886 0.946 0.929 0.946 0.948 0.952 0.957 0.907 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
81. Y56A3A.19 Y56A3A.19 9680 7.469 0.937 0.925 0.925 0.925 0.904 0.923 0.962 0.968 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
82. Y71G12B.9 lin-65 7476 7.469 0.860 0.973 0.939 0.973 0.941 0.909 0.923 0.951 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
83. ZK1128.6 ttll-4 6059 7.468 0.884 0.967 0.906 0.967 0.938 0.953 0.887 0.966 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
84. C02F5.4 cids-1 3125 7.468 0.866 0.969 0.881 0.969 0.955 0.965 0.933 0.930 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
85. F56F3.1 ifet-1 25772 7.467 0.923 0.973 0.957 0.973 0.893 0.875 0.925 0.948 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
86. F13G3.11 mrpl-13 6024 7.466 0.950 0.914 0.941 0.914 0.916 0.944 0.951 0.936 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
87. Y37D8A.11 cec-7 8801 7.466 0.879 0.970 0.943 0.970 0.944 0.943 0.961 0.856 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
88. R144.12 R144.12 1583 7.463 0.914 0.912 0.962 0.912 0.888 0.980 0.917 0.978
89. W08E3.1 snr-2 14849 7.463 0.910 0.944 0.963 0.944 0.831 0.930 0.965 0.976 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
90. C44E4.5 C44E4.5 919 7.461 0.883 0.895 0.963 0.895 0.960 0.947 0.974 0.944
91. C05D11.10 mrps-17 4613 7.461 0.968 0.925 0.945 0.925 0.898 0.917 0.928 0.955 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
92. H20J04.8 mog-2 3084 7.459 0.954 0.931 0.935 0.931 0.914 0.894 0.930 0.970 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
93. W06H3.3 ctps-1 8363 7.457 0.953 0.935 0.928 0.935 0.898 0.924 0.927 0.957 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
94. Y55F3AR.3 cct-8 17979 7.457 0.948 0.899 0.952 0.899 0.922 0.950 0.945 0.942 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
95. F46F11.2 cey-2 47143 7.453 0.875 0.969 0.916 0.969 0.923 0.954 0.953 0.894 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
96. Y95D11A.3 Y95D11A.3 1480 7.451 0.836 0.932 0.968 0.932 0.941 0.969 0.942 0.931
97. Y57A10A.25 parn-2 2634 7.451 0.880 0.952 0.929 0.952 0.914 0.959 0.948 0.917 PARN (Poly(A)-specific RiboNuclease) homolog [Source:RefSeq peptide;Acc:NP_496602]
98. T21B10.1 mrpl-50 14595 7.449 0.915 0.952 0.969 0.952 0.877 0.934 0.937 0.913 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
99. ZK652.1 snr-5 5993 7.449 0.951 0.943 0.968 0.943 0.855 0.915 0.928 0.946 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
100. ZK856.9 zhit-3 2552 7.448 0.921 0.947 0.927 0.947 0.931 0.954 0.924 0.897 Zinc finger, HIT-type [Source:RefSeq peptide;Acc:NP_505627]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA