C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C15H11.8

Gene ID Gene Name Reads Transcripts Annotation
C15H11.8 rpoa-12 2257 C15H11.8.1, C15H11.8.2 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_506572]

Genes with expression patterns similar to C15H11.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C15H11.8 rpoa-12 2257 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_506572]
2. F43G9.5 cfim-1 9169 7.689 0.970 0.956 0.991 0.956 0.963 0.937 0.960 0.956 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
3. W01A8.5 tofu-5 5678 7.676 0.977 0.965 0.973 0.965 0.967 0.964 0.946 0.919 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
4. K07A1.12 lin-53 15817 7.65 0.954 0.954 0.988 0.954 0.960 0.950 0.953 0.937 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
5. Y14H12B.2 Y14H12B.2 6496 7.634 0.937 0.947 0.986 0.947 0.956 0.965 0.944 0.952
6. C36A4.5 maph-1.3 15493 7.633 0.960 0.955 0.992 0.955 0.969 0.956 0.950 0.896 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
7. R07E5.14 rnp-4 11659 7.629 0.971 0.946 0.975 0.946 0.951 0.928 0.962 0.950 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
8. F53A2.4 nud-1 7818 7.616 0.927 0.950 0.953 0.950 0.972 0.964 0.955 0.945 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
9. C34E10.2 gop-2 5684 7.613 0.943 0.951 0.968 0.951 0.950 0.961 0.958 0.931 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
10. C34D4.12 cyn-12 7363 7.599 0.934 0.957 0.948 0.957 0.949 0.925 0.944 0.985 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
11. F58G11.6 ccz-1 5655 7.595 0.959 0.960 0.978 0.960 0.934 0.978 0.935 0.891
12. M01E11.5 cey-3 20931 7.591 0.939 0.929 0.973 0.929 0.959 0.931 0.960 0.971 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
13. C48E7.2 let-611 2191 7.591 0.919 0.965 0.962 0.965 0.949 0.977 0.888 0.966
14. F52B5.3 F52B5.3 2077 7.586 0.968 0.940 0.994 0.940 0.920 0.954 0.956 0.914
15. W08E3.1 snr-2 14849 7.576 0.947 0.938 0.968 0.938 0.936 0.922 0.960 0.967 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
16. Y41D4B.13 ced-2 10100 7.569 0.956 0.958 0.982 0.958 0.948 0.950 0.928 0.889 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
17. F09G2.9 attf-2 14771 7.567 0.936 0.954 0.981 0.954 0.943 0.954 0.935 0.910 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
18. R06A4.4 imb-2 10302 7.567 0.964 0.959 0.989 0.959 0.966 0.899 0.937 0.894 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
19. Y37D8A.9 mrg-1 14369 7.565 0.961 0.942 0.985 0.942 0.961 0.903 0.920 0.951 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
20. F59A2.1 npp-9 34375 7.554 0.936 0.941 0.957 0.941 0.947 0.943 0.946 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
21. T14G10.6 tsp-12 10308 7.549 0.956 0.933 0.974 0.933 0.953 0.958 0.912 0.930 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
22. F21D5.6 F21D5.6 1798 7.546 0.942 0.963 0.981 0.963 0.955 0.939 0.885 0.918
23. F01F1.8 cct-6 29460 7.54 0.927 0.952 0.967 0.952 0.949 0.943 0.966 0.884 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
24. Y62E10A.12 lsm-3 4322 7.539 0.958 0.928 0.945 0.928 0.962 0.939 0.951 0.928 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
25. C06A8.4 skr-17 2589 7.538 0.959 0.944 0.956 0.944 0.944 0.959 0.892 0.940 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
26. Y87G2A.6 cyn-15 2566 7.537 0.916 0.963 0.972 0.963 0.916 0.932 0.946 0.929 CYclophyliN [Source:RefSeq peptide;Acc:NP_493378]
27. C37A2.4 cye-1 4158 7.534 0.949 0.906 0.984 0.906 0.952 0.919 0.965 0.953 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
28. Y38C9A.2 cgp-1 11756 7.533 0.936 0.947 0.962 0.947 0.957 0.942 0.934 0.908 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
29. R09B3.1 exo-3 4401 7.533 0.946 0.919 0.971 0.919 0.933 0.922 0.956 0.967 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
30. F44G4.4 tdp-1 3335 7.529 0.959 0.944 0.967 0.944 0.956 0.945 0.933 0.881 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
31. D2023.5 mpst-1 10328 7.528 0.897 0.929 0.937 0.929 0.954 0.955 0.958 0.969 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
32. C26E6.7 eri-9 8069 7.528 0.953 0.948 0.971 0.948 0.962 0.937 0.919 0.890 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
33. Y71F9B.4 snr-7 13542 7.527 0.914 0.955 0.939 0.955 0.960 0.919 0.937 0.948 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
34. R06F6.1 cdl-1 14167 7.527 0.920 0.952 0.976 0.952 0.957 0.922 0.928 0.920 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
35. B0240.4 npp-22 5510 7.525 0.941 0.943 0.950 0.943 0.945 0.928 0.938 0.937 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
36. C48B4.7 C48B4.7 4006 7.525 0.928 0.954 0.947 0.954 0.957 0.856 0.958 0.971
37. T23G11.3 gld-1 41748 7.525 0.882 0.944 0.951 0.944 0.953 0.949 0.949 0.953 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
38. B0205.9 B0205.9 3651 7.523 0.934 0.938 0.925 0.938 0.918 0.975 0.955 0.940
39. F54D5.11 F54D5.11 2756 7.52 0.947 0.961 0.973 0.961 0.962 0.925 0.921 0.870 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
40. F56D1.3 mrps-16 2309 7.517 0.892 0.948 0.946 0.948 0.947 0.974 0.910 0.952 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
41. C18E9.3 szy-20 6819 7.516 0.930 0.930 0.978 0.930 0.961 0.948 0.938 0.901 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
42. C01F6.8 icln-1 6586 7.514 0.912 0.938 0.953 0.938 0.953 0.906 0.945 0.969 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
43. B0414.5 cpb-3 11584 7.514 0.940 0.941 0.985 0.941 0.951 0.935 0.939 0.882 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
44. C26B2.6 elpc-4 3600 7.512 0.907 0.950 0.940 0.950 0.945 0.951 0.934 0.935 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
45. C16C10.4 C16C10.4 3439 7.51 0.920 0.969 0.961 0.969 0.952 0.899 0.884 0.956 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
46. D1007.5 D1007.5 7940 7.505 0.918 0.952 0.941 0.952 0.965 0.954 0.941 0.882
47. Y40G12A.1 ubh-3 4142 7.504 0.916 0.932 0.942 0.932 0.928 0.950 0.964 0.940 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
48. H27M09.2 rpb-5 4744 7.502 0.945 0.934 0.935 0.934 0.948 0.954 0.925 0.927 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
49. C14B1.5 dph-1 1253 7.502 0.957 0.924 0.942 0.924 0.899 0.954 0.949 0.953 Diphthamide biosynthesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P49958]
50. Y75B8A.16 Y75B8A.16 1406 7.5 0.955 0.965 0.926 0.965 0.908 0.949 0.872 0.960
51. K04G2.2 aho-3 15189 7.5 0.957 0.922 0.979 0.922 0.970 0.882 0.950 0.918
52. F32A5.7 lsm-4 3785 7.498 0.972 0.959 0.961 0.959 0.917 0.933 0.914 0.883 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
53. Y66D12A.7 Y66D12A.7 1746 7.496 0.959 0.890 0.976 0.890 0.942 0.930 0.939 0.970 Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BI40]
54. Y47D3A.26 smc-3 6256 7.496 0.900 0.934 0.969 0.934 0.961 0.949 0.939 0.910 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
55. C14B1.4 wdr-5.1 4424 7.496 0.940 0.953 0.975 0.953 0.927 0.954 0.950 0.844 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
56. C25A1.4 C25A1.4 15507 7.495 0.977 0.941 0.986 0.941 0.954 0.937 0.916 0.843
57. M01E11.2 M01E11.2 1878 7.495 0.953 0.923 0.987 0.923 0.931 0.959 0.920 0.899
58. B0035.12 sart-3 7188 7.494 0.916 0.958 0.953 0.958 0.961 0.903 0.901 0.944 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
59. Y18D10A.17 car-1 87364 7.493 0.912 0.914 0.957 0.914 0.922 0.969 0.953 0.952 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
60. F52F12.4 lsl-1 4055 7.491 0.915 0.952 0.952 0.952 0.954 0.892 0.937 0.937 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
61. Y73B6BL.33 hrpf-2 4443 7.491 0.959 0.943 0.984 0.943 0.931 0.919 0.922 0.890 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
62. T10G3.6 gut-2 3374 7.489 0.945 0.930 0.966 0.930 0.952 0.926 0.908 0.932
63. C17H12.13 anat-1 12995 7.488 0.953 0.962 0.985 0.962 0.973 0.958 0.952 0.743 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
64. CC4.3 smu-1 4169 7.487 0.965 0.932 0.972 0.932 0.947 0.958 0.925 0.856 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
65. T28D9.2 rsp-5 6460 7.487 0.952 0.938 0.968 0.938 0.949 0.933 0.895 0.914 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
66. F26F4.11 rpb-8 7601 7.486 0.948 0.907 0.955 0.907 0.935 0.943 0.929 0.962 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
67. F16D3.4 tbcd-1 2159 7.485 0.948 0.922 0.960 0.922 0.958 0.965 0.930 0.880 TuBulin folding Cofactor D homolog [Source:RefSeq peptide;Acc:NP_492270]
68. F46F11.2 cey-2 47143 7.484 0.919 0.950 0.919 0.950 0.940 0.928 0.941 0.937 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
69. R74.8 R74.8 7722 7.481 0.958 0.952 0.975 0.952 0.944 0.955 0.928 0.817
70. K08F4.2 gtbp-1 25222 7.48 0.921 0.946 0.957 0.946 0.944 0.900 0.969 0.897 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
71. F21C3.4 rde-2 6286 7.478 0.889 0.947 0.964 0.947 0.954 0.926 0.937 0.914
72. F58E10.3 ddx-17 15107 7.478 0.949 0.957 0.978 0.957 0.895 0.915 0.918 0.909 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
73. C02F5.4 cids-1 3125 7.476 0.961 0.947 0.971 0.947 0.942 0.923 0.893 0.892 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
74. C48B6.3 C48B6.3 6610 7.476 0.898 0.912 0.966 0.912 0.922 0.960 0.951 0.955
75. H43I07.2 rpac-40 3342 7.474 0.919 0.938 0.926 0.938 0.921 0.956 0.927 0.949 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
76. T20D3.7 vps-26 9349 7.474 0.966 0.945 0.986 0.945 0.930 0.939 0.942 0.821 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
77. F41H10.11 sand-1 5039 7.471 0.960 0.944 0.966 0.944 0.944 0.919 0.942 0.852 SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
78. F43G6.9 patr-1 23000 7.468 0.927 0.963 0.972 0.963 0.950 0.892 0.906 0.895 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
79. C28A5.1 C28A5.1 1076 7.467 0.925 0.937 0.914 0.937 0.957 0.930 0.935 0.932
80. C46A5.9 hcf-1 6295 7.466 0.955 0.969 0.979 0.969 0.942 0.889 0.895 0.868 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
81. C04G2.6 dis-3 5048 7.465 0.886 0.970 0.956 0.970 0.955 0.901 0.894 0.933 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
82. Y39B6A.35 tgt-2 2364 7.465 0.944 0.927 0.882 0.927 0.950 0.932 0.955 0.948 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
83. R03D7.7 nos-1 8407 7.465 0.921 0.940 0.952 0.940 0.948 0.907 0.928 0.929 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
84. H26D21.2 msh-2 2115 7.464 0.960 0.902 0.966 0.902 0.947 0.956 0.888 0.943 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491202]
85. C36B1.7 dhfr-1 2900 7.462 0.954 0.922 0.958 0.922 0.952 0.900 0.924 0.930 Putative dihydrofolate reductase [Source:UniProtKB/Swiss-Prot;Acc:Q93341]
86. K07D4.3 rpn-11 8834 7.462 0.961 0.958 0.986 0.958 0.946 0.874 0.944 0.835 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
87. C23G10.8 C23G10.8 4642 7.462 0.873 0.956 0.954 0.956 0.947 0.922 0.929 0.925
88. Y43F4B.4 npp-18 4780 7.461 0.970 0.944 0.980 0.944 0.952 0.910 0.899 0.862 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
89. Y43F4B.3 set-25 8036 7.461 0.918 0.946 0.973 0.946 0.946 0.920 0.889 0.923 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
90. F35D11.5 F35D11.5 14785 7.458 0.925 0.951 0.927 0.951 0.912 0.952 0.918 0.922
91. F53F10.5 npp-11 3378 7.458 0.952 0.942 0.976 0.942 0.898 0.931 0.895 0.922 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
92. Y73B6BL.3 exos-2 2624 7.457 0.956 0.917 0.963 0.917 0.949 0.915 0.935 0.905 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
93. Y116A8C.42 snr-1 17062 7.455 0.910 0.948 0.962 0.948 0.942 0.867 0.950 0.928 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
94. ZK1128.6 ttll-4 6059 7.455 0.926 0.964 0.976 0.964 0.956 0.918 0.843 0.908 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
95. ZK863.6 dpy-30 16177 7.455 0.948 0.950 0.951 0.950 0.934 0.859 0.965 0.898 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
96. W03F8.4 W03F8.4 20285 7.454 0.915 0.949 0.974 0.949 0.971 0.859 0.922 0.915
97. Y73B6BL.32 lsm-8 11002 7.453 0.927 0.932 0.957 0.932 0.958 0.892 0.928 0.927 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
98. T12G3.5 mrpl-51 5192 7.452 0.966 0.920 0.955 0.920 0.895 0.936 0.944 0.916 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
99. F26B1.3 ima-2 18826 7.452 0.948 0.939 0.972 0.939 0.940 0.856 0.924 0.934 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
100. Y39E4B.2 snpc-1.2 5800 7.452 0.909 0.967 0.976 0.967 0.954 0.876 0.899 0.904 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]

There are 2300 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA