C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for B0035.4

Gene ID Gene Name Reads Transcripts Annotation
B0035.4 pfd-4 5006 B0035.4 Probable prefoldin subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q17435]

Genes with expression patterns similar to B0035.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0035.4 pfd-4 5006 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable prefoldin subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q17435]
2. T05C12.7 cct-1 41264 7.68 0.962 0.965 0.954 0.965 0.944 0.965 0.965 0.960 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
3. F01F1.8 cct-6 29460 7.641 0.940 0.958 0.968 0.958 0.953 0.935 0.962 0.967 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
4. C07G2.3 cct-5 44703 7.637 0.944 0.957 0.942 0.957 0.955 0.980 0.942 0.960 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
5. T21B10.7 cct-2 13999 7.622 0.939 0.954 0.970 0.954 0.957 0.930 0.934 0.984 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
6. T21B10.1 mrpl-50 14595 7.585 0.935 0.967 0.956 0.967 0.929 0.929 0.930 0.972 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
7. C08F8.1 pfd-1 10199 7.579 0.955 0.945 0.933 0.945 0.966 0.952 0.929 0.954 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
8. C36A4.5 maph-1.3 15493 7.573 0.912 0.953 0.947 0.953 0.958 0.948 0.957 0.945 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
9. Y40G12A.1 ubh-3 4142 7.572 0.963 0.946 0.946 0.946 0.933 0.933 0.955 0.950 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
10. R07E5.14 rnp-4 11659 7.566 0.957 0.949 0.952 0.949 0.945 0.943 0.949 0.922 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
11. ZK863.6 dpy-30 16177 7.562 0.940 0.948 0.961 0.948 0.951 0.953 0.939 0.922 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
12. K08F4.2 gtbp-1 25222 7.561 0.942 0.950 0.968 0.950 0.950 0.910 0.970 0.921 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
13. F54A3.3 cct-3 25183 7.56 0.941 0.955 0.923 0.955 0.934 0.966 0.952 0.934 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
14. T24F1.1 raga-1 16171 7.558 0.928 0.950 0.951 0.950 0.933 0.983 0.953 0.910 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
15. F09G2.9 attf-2 14771 7.554 0.948 0.950 0.952 0.950 0.969 0.946 0.940 0.899 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
16. C49H3.10 xpo-3 9101 7.548 0.934 0.954 0.957 0.954 0.950 0.915 0.926 0.958 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
17. Y55F3AR.3 cct-8 17979 7.548 0.925 0.944 0.960 0.944 0.963 0.934 0.945 0.933 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
18. M01B12.3 arx-7 7584 7.546 0.942 0.944 0.937 0.944 0.923 0.976 0.938 0.942 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
19. C17H12.13 anat-1 12995 7.545 0.945 0.956 0.953 0.956 0.958 0.882 0.969 0.926 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
20. T06G6.9 pfd-3 10945 7.543 0.927 0.937 0.937 0.937 0.959 0.973 0.919 0.954 Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
21. K07D4.3 rpn-11 8834 7.539 0.915 0.945 0.959 0.945 0.958 0.960 0.913 0.944 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
22. W08E3.1 snr-2 14849 7.537 0.952 0.974 0.960 0.974 0.920 0.863 0.953 0.941 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
23. K07C5.1 arx-2 20142 7.536 0.953 0.940 0.958 0.940 0.937 0.946 0.914 0.948 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
24. R06A4.4 imb-2 10302 7.529 0.943 0.920 0.941 0.920 0.955 0.936 0.944 0.970 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
25. F43G9.5 cfim-1 9169 7.525 0.972 0.929 0.949 0.929 0.949 0.904 0.944 0.949 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
26. Y73B6BL.32 lsm-8 11002 7.525 0.960 0.951 0.951 0.951 0.958 0.896 0.938 0.920 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
27. C41C4.6 ulp-4 13338 7.523 0.886 0.948 0.945 0.948 0.951 0.936 0.939 0.970 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
28. ZC410.2 mppb-1 3991 7.521 0.960 0.946 0.900 0.946 0.927 0.929 0.964 0.949 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
29. Y62E10A.12 lsm-3 4322 7.521 0.950 0.947 0.911 0.947 0.957 0.914 0.955 0.940 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
30. D2023.5 mpst-1 10328 7.52 0.929 0.949 0.945 0.949 0.945 0.877 0.977 0.949 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
31. Y55F3AM.12 dcap-1 8679 7.52 0.970 0.946 0.945 0.946 0.959 0.899 0.952 0.903 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
32. K07A1.12 lin-53 15817 7.519 0.909 0.937 0.948 0.937 0.960 0.934 0.956 0.938 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
33. C52E4.3 snr-4 19308 7.51 0.959 0.952 0.939 0.952 0.933 0.960 0.886 0.929 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
34. F53A2.4 nud-1 7818 7.51 0.962 0.938 0.941 0.938 0.956 0.892 0.960 0.923 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
35. T03F6.5 lis-1 8818 7.506 0.957 0.942 0.938 0.942 0.919 0.977 0.888 0.943 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
36. K11H3.6 mrpl-36 7328 7.504 0.963 0.956 0.949 0.956 0.951 0.904 0.912 0.913 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
37. Y71F9B.4 snr-7 13542 7.501 0.942 0.950 0.927 0.950 0.965 0.927 0.900 0.940 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
38. Y39G10AR.20 tbca-1 4155 7.499 0.925 0.946 0.886 0.946 0.934 0.968 0.942 0.952 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
39. C34E10.2 gop-2 5684 7.497 0.943 0.948 0.954 0.948 0.953 0.898 0.920 0.933 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
40. B0205.11 mrpl-9 9162 7.491 0.959 0.961 0.926 0.961 0.930 0.923 0.891 0.940 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
41. R151.9 pfd-5 6951 7.49 0.951 0.955 0.929 0.955 0.927 0.962 0.892 0.919 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
42. Y38C9A.2 cgp-1 11756 7.489 0.926 0.941 0.900 0.941 0.937 0.929 0.956 0.959 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
43. F38A5.1 odr-8 5283 7.487 0.934 0.952 0.955 0.952 0.894 0.961 0.897 0.942 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
44. T10B5.5 cct-7 24616 7.485 0.908 0.960 0.928 0.960 0.937 0.941 0.903 0.948 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
45. F21C3.4 rde-2 6286 7.483 0.916 0.934 0.948 0.934 0.955 0.901 0.932 0.963
46. K08E7.1 eak-7 18960 7.483 0.955 0.939 0.950 0.939 0.920 0.954 0.872 0.954 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
47. F43G6.9 patr-1 23000 7.482 0.885 0.924 0.901 0.924 0.955 0.972 0.938 0.983 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
48. Y105E8A.22 exc-4 6168 7.482 0.937 0.952 0.940 0.952 0.944 0.956 0.908 0.893 Chloride intracellular channel exc-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8WQA4]
49. T26E3.3 par-6 8650 7.481 0.935 0.947 0.935 0.947 0.927 0.968 0.875 0.947 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
50. Y14H12B.2 Y14H12B.2 6496 7.481 0.925 0.948 0.954 0.948 0.946 0.878 0.977 0.905
51. W06E11.4 sbds-1 6701 7.481 0.922 0.959 0.942 0.959 0.952 0.892 0.882 0.973 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
52. Y71F9AM.5 nxt-1 5223 7.479 0.894 0.916 0.964 0.916 0.956 0.966 0.938 0.929 NTF2-related export protein [Source:UniProtKB/Swiss-Prot;Acc:Q9U757]
53. R07B7.3 pqn-53 10459 7.477 0.950 0.938 0.952 0.938 0.931 0.951 0.885 0.932 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
54. B0285.1 cdk-12 5900 7.472 0.961 0.922 0.945 0.922 0.937 0.950 0.889 0.946 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
55. T28D9.10 snr-3 9995 7.472 0.961 0.946 0.918 0.946 0.945 0.895 0.960 0.901 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
56. T20D3.7 vps-26 9349 7.471 0.970 0.936 0.941 0.936 0.920 0.925 0.938 0.905 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
57. B0205.9 B0205.9 3651 7.47 0.943 0.944 0.882 0.944 0.939 0.936 0.959 0.923
58. Y116A8C.42 snr-1 17062 7.467 0.946 0.957 0.958 0.957 0.941 0.850 0.944 0.914 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
59. T24H10.3 dnj-23 11446 7.463 0.904 0.919 0.931 0.919 0.950 0.937 0.972 0.931 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
60. C01F6.8 icln-1 6586 7.463 0.926 0.936 0.933 0.936 0.943 0.901 0.968 0.920 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
61. F59E12.11 sam-4 8179 7.461 0.961 0.938 0.954 0.938 0.945 0.923 0.882 0.920
62. Y62E10A.11 mdt-9 5971 7.459 0.950 0.943 0.939 0.943 0.933 0.926 0.894 0.931 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
63. R09B3.5 mag-1 7496 7.457 0.942 0.948 0.962 0.948 0.919 0.915 0.886 0.937 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
64. ZK1128.6 ttll-4 6059 7.456 0.909 0.960 0.942 0.960 0.956 0.876 0.899 0.954 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
65. T25G3.4 T25G3.4 9394 7.456 0.929 0.942 0.946 0.942 0.956 0.916 0.943 0.882 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
66. Y41D4B.13 ced-2 10100 7.454 0.911 0.916 0.928 0.916 0.939 0.954 0.934 0.956 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
67. B0303.15 mrpl-11 9889 7.454 0.959 0.923 0.959 0.923 0.933 0.939 0.906 0.912 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
68. K04G2.2 aho-3 15189 7.454 0.899 0.918 0.933 0.918 0.967 0.927 0.941 0.951
69. Y41D4B.19 npp-8 12992 7.454 0.896 0.958 0.935 0.958 0.950 0.904 0.929 0.924 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
70. W08E3.3 ola-1 20885 7.451 0.915 0.936 0.921 0.936 0.932 0.969 0.898 0.944 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
71. R74.8 R74.8 7722 7.45 0.949 0.943 0.967 0.943 0.941 0.939 0.937 0.831
72. C55A6.2 ttll-5 5158 7.448 0.943 0.942 0.896 0.942 0.924 0.954 0.898 0.949 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
73. T20D3.5 T20D3.5 3036 7.447 0.906 0.905 0.926 0.905 0.960 0.941 0.940 0.964
74. Y49E10.6 his-72 32293 7.441 0.911 0.940 0.916 0.940 0.935 0.948 0.883 0.968 Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
75. B0280.1 ggtb-1 3076 7.44 0.951 0.921 0.938 0.921 0.942 0.940 0.920 0.907 Probable geranylgeranyl transferase type-2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P41992]
76. C34D4.12 cyn-12 7363 7.44 0.973 0.948 0.935 0.948 0.951 0.855 0.939 0.891 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
77. Y71G12B.12 atg-5 5575 7.439 0.956 0.926 0.930 0.926 0.914 0.971 0.884 0.932 Autophagy protein 5 [Source:RefSeq peptide;Acc:NP_001293440]
78. T26A5.9 dlc-1 59038 7.438 0.958 0.946 0.971 0.946 0.873 0.967 0.872 0.905 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
79. Y54E5A.6 Y54E5A.6 770 7.438 0.897 0.962 0.948 0.962 0.942 0.909 0.884 0.934
80. T12G3.5 mrpl-51 5192 7.437 0.972 0.943 0.954 0.943 0.856 0.908 0.937 0.924 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
81. Y37D8A.9 mrg-1 14369 7.437 0.918 0.946 0.943 0.946 0.954 0.880 0.934 0.916 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
82. F59A2.1 npp-9 34375 7.437 0.926 0.952 0.916 0.952 0.948 0.885 0.957 0.901 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
83. B0261.4 mrpl-47 8210 7.434 0.920 0.961 0.916 0.961 0.901 0.915 0.894 0.966 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
84. C26D10.1 ran-3 11111 7.433 0.904 0.958 0.941 0.958 0.914 0.870 0.946 0.942 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
85. Y18D10A.17 car-1 87364 7.433 0.955 0.931 0.915 0.931 0.922 0.870 0.969 0.940 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
86. H20J04.8 mog-2 3084 7.431 0.961 0.963 0.943 0.963 0.926 0.832 0.904 0.939 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
87. ZK637.3 lnkn-1 16095 7.429 0.957 0.944 0.966 0.944 0.912 0.953 0.842 0.911 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
88. C43E11.10 cdc-6 5331 7.428 0.939 0.936 0.893 0.936 0.913 0.888 0.970 0.953 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
89. C26E6.7 eri-9 8069 7.427 0.915 0.942 0.910 0.942 0.955 0.895 0.922 0.946 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
90. C07H6.5 cgh-1 60576 7.427 0.912 0.925 0.906 0.925 0.953 0.878 0.965 0.963 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
91. M88.7 cisd-3.1 5713 7.426 0.921 0.934 0.971 0.934 0.945 0.914 0.876 0.931 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
92. Y116A8C.34 cyn-13 2972 7.424 0.958 0.927 0.938 0.927 0.922 0.909 0.912 0.931 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
93. F32A5.7 lsm-4 3785 7.421 0.953 0.937 0.952 0.937 0.908 0.932 0.891 0.911 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
94. F58E10.3 ddx-17 15107 7.421 0.936 0.950 0.953 0.950 0.909 0.910 0.905 0.908 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
95. W01A8.5 tofu-5 5678 7.421 0.915 0.938 0.924 0.938 0.958 0.873 0.934 0.941 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
96. F28H1.3 aars-2 13537 7.421 0.928 0.955 0.958 0.955 0.911 0.934 0.891 0.889 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
97. Y119C1B.4 mrpl-19 2634 7.42 0.946 0.884 0.953 0.884 0.926 0.936 0.968 0.923 Probable 39S ribosomal protein L19, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Y83]
98. C15H11.8 rpoa-12 2257 7.419 0.950 0.926 0.954 0.926 0.947 0.885 0.944 0.887 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_506572]
99. ZK1058.4 ccdc-47 8879 7.417 0.946 0.949 0.958 0.949 0.924 0.936 0.820 0.935 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
100. C06A1.5 rpb-6 7515 7.414 0.952 0.930 0.948 0.930 0.935 0.875 0.911 0.933 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]

There are 1050 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA