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Results for F28C6.3

Gene ID Gene Name Reads Transcripts Annotation
F28C6.3 cpf-1 1583 F28C6.3 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_495822]

Genes with expression patterns similar to F28C6.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28C6.3 cpf-1 1583 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_495822]
2. F53F10.5 npp-11 3378 7.609 0.966 0.934 0.960 0.934 0.912 0.988 0.957 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
3. T12G3.5 mrpl-51 5192 7.578 0.953 0.947 0.913 0.947 0.958 0.951 0.954 0.955 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
4. Y54E5A.4 npp-4 6288 7.57 0.958 0.929 0.952 0.929 0.918 0.940 0.979 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
5. T28D9.2 rsp-5 6460 7.554 0.957 0.891 0.960 0.891 0.947 0.978 0.958 0.972 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
6. Y71G12B.9 lin-65 7476 7.551 0.937 0.915 0.950 0.915 0.936 0.980 0.952 0.966 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
7. Y37D8A.9 mrg-1 14369 7.546 0.953 0.909 0.927 0.909 0.937 0.988 0.961 0.962 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
8. K02F3.11 rnp-5 6205 7.544 0.957 0.918 0.971 0.918 0.966 0.974 0.899 0.941 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
9. F23F1.1 nfyc-1 9983 7.541 0.954 0.905 0.959 0.905 0.969 0.974 0.915 0.960 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
10. Y38A8.3 ulp-2 7403 7.539 0.942 0.941 0.954 0.941 0.933 0.973 0.945 0.910 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
11. Y39G10AR.7 ekl-7 7072 7.534 0.918 0.933 0.945 0.933 0.942 0.985 0.918 0.960
12. PAR2.1 mtss-1 4055 7.532 0.921 0.896 0.922 0.896 0.969 0.974 0.966 0.988 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
13. F58F6.4 rfc-2 2074 7.531 0.940 0.921 0.908 0.921 0.933 0.981 0.950 0.977 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
14. F32A5.7 lsm-4 3785 7.531 0.971 0.895 0.970 0.895 0.953 0.959 0.932 0.956 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
15. F52C9.7 mog-3 9880 7.528 0.964 0.917 0.951 0.917 0.954 0.942 0.954 0.929 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
16. Y17G7A.1 hmg-12 29989 7.525 0.966 0.918 0.960 0.918 0.901 0.988 0.919 0.955 HMG [Source:RefSeq peptide;Acc:NP_496544]
17. ZK632.1 mcm-6 9164 7.518 0.942 0.915 0.916 0.915 0.935 0.983 0.966 0.946 DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
18. F49E8.1 nprl-2 1851 7.516 0.936 0.941 0.947 0.941 0.921 0.933 0.937 0.960 LOW QUALITY PROTEIN: Nitrogen Permease Regulator Like homolog [Source:RefSeq peptide;Acc:NP_001294159]
19. Y37D8A.11 cec-7 8801 7.515 0.936 0.920 0.949 0.920 0.935 0.986 0.945 0.924 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
20. W02F12.6 sna-1 7338 7.514 0.967 0.929 0.921 0.929 0.952 0.926 0.965 0.925 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
21. F59E12.11 sam-4 8179 7.514 0.962 0.916 0.944 0.916 0.909 0.944 0.957 0.966
22. ZK742.1 xpo-1 20741 7.513 0.943 0.912 0.945 0.912 0.934 0.957 0.944 0.966 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
23. F33D4.5 mrpl-1 5337 7.513 0.918 0.916 0.927 0.916 0.965 0.960 0.940 0.971 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
24. T28D9.10 snr-3 9995 7.511 0.943 0.916 0.896 0.916 0.928 0.983 0.951 0.978 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
25. Y39G10AR.13 icp-1 3445 7.511 0.950 0.904 0.949 0.904 0.905 0.977 0.948 0.974 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
26. K01G5.4 ran-1 32379 7.509 0.972 0.913 0.952 0.913 0.913 0.965 0.930 0.951 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
27. Y18D10A.16 Y18D10A.16 2881 7.506 0.945 0.891 0.926 0.891 0.929 0.983 0.975 0.966
28. Y41D4B.19 npp-8 12992 7.504 0.943 0.907 0.958 0.907 0.945 0.959 0.947 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
29. F48C1.6 F48C1.6 4064 7.503 0.944 0.953 0.937 0.953 0.900 0.959 0.947 0.910
30. Y55F3AM.12 dcap-1 8679 7.503 0.970 0.916 0.958 0.916 0.941 0.962 0.886 0.954 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
31. EEED8.1 tofu-6 3962 7.501 0.961 0.915 0.942 0.915 0.905 0.981 0.918 0.964 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
32. C08B11.5 sap-49 10553 7.501 0.962 0.905 0.922 0.905 0.933 0.965 0.942 0.967 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
33. Y43C5A.5 thk-1 2504 7.5 0.935 0.916 0.950 0.916 0.881 0.970 0.952 0.980 Thymidine kinase [Source:RefSeq peptide;Acc:NP_001255477]
34. C02B10.5 C02B10.5 9171 7.5 0.976 0.920 0.945 0.920 0.899 0.958 0.926 0.956
35. T22C1.3 T22C1.3 2305 7.5 0.966 0.946 0.947 0.946 0.937 0.922 0.897 0.939
36. C36B1.3 rpb-3 4442 7.498 0.959 0.932 0.963 0.932 0.945 0.951 0.880 0.936 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
37. Y73F8A.34 tag-349 7966 7.496 0.957 0.944 0.963 0.944 0.914 0.917 0.901 0.956
38. Y51H1A.6 mcd-1 3250 7.494 0.942 0.926 0.973 0.926 0.974 0.960 0.898 0.895 Modifier of Cell Death phenotype [Source:RefSeq peptide;Acc:NP_001254412]
39. C05C8.6 hpo-9 8263 7.492 0.944 0.927 0.936 0.927 0.942 0.953 0.960 0.903
40. ZK1128.6 ttll-4 6059 7.492 0.925 0.922 0.942 0.922 0.934 0.978 0.927 0.942 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
41. F25B5.2 nop-1 4127 7.49 0.951 0.939 0.957 0.939 0.946 0.947 0.884 0.927 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
42. C06A8.4 skr-17 2589 7.489 0.954 0.921 0.975 0.921 0.932 0.929 0.947 0.910 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
43. C01B10.9 C01B10.9 4049 7.489 0.941 0.926 0.941 0.926 0.939 0.947 0.909 0.960
44. C27B7.1 spr-2 14958 7.488 0.951 0.915 0.964 0.915 0.904 0.946 0.934 0.959 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
45. Y53C12B.3 nos-3 20231 7.488 0.932 0.924 0.935 0.924 0.914 0.944 0.942 0.973 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
46. C52E4.6 cyl-1 6405 7.488 0.969 0.906 0.941 0.906 0.951 0.942 0.956 0.917 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
47. Y62E10A.11 mdt-9 5971 7.487 0.927 0.932 0.952 0.932 0.921 0.962 0.951 0.910 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
48. F46B6.3 smg-4 4959 7.486 0.947 0.952 0.934 0.952 0.910 0.931 0.904 0.956 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
49. Y37E3.3 rpb-10 4051 7.485 0.936 0.900 0.916 0.900 0.940 0.975 0.953 0.965 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
50. F59A2.1 npp-9 34375 7.485 0.950 0.895 0.942 0.895 0.912 0.986 0.953 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
51. R12C12.2 ran-5 14517 7.485 0.968 0.910 0.961 0.910 0.903 0.939 0.954 0.940 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
52. R53.6 psf-1 4721 7.485 0.957 0.896 0.921 0.896 0.953 0.990 0.927 0.945 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
53. F56F3.1 ifet-1 25772 7.484 0.932 0.910 0.940 0.910 0.929 0.951 0.961 0.951 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
54. B0464.9 B0464.9 2997 7.483 0.915 0.917 0.946 0.917 0.955 0.977 0.906 0.950 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
55. R07E5.14 rnp-4 11659 7.482 0.975 0.899 0.938 0.899 0.935 0.953 0.933 0.950 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
56. T23H2.1 npp-12 12425 7.481 0.944 0.911 0.956 0.911 0.913 0.981 0.940 0.925 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
57. F32H2.4 thoc-3 3861 7.48 0.923 0.912 0.946 0.912 0.958 0.938 0.934 0.957 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
58. B0414.3 hil-5 10816 7.48 0.945 0.885 0.957 0.885 0.931 0.976 0.947 0.954 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
59. Y113G7B.5 fog-2 2753 7.479 0.954 0.886 0.944 0.886 0.929 0.953 0.976 0.951 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
60. F33H2.5 pole-1 3734 7.478 0.934 0.915 0.956 0.915 0.886 0.983 0.956 0.933 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
61. T12E12.2 cec-6 4758 7.478 0.889 0.901 0.953 0.901 0.944 0.970 0.969 0.951 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
62. Y116A8C.42 snr-1 17062 7.477 0.918 0.908 0.934 0.908 0.921 0.986 0.953 0.949 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
63. W08E3.1 snr-2 14849 7.477 0.972 0.890 0.944 0.890 0.930 0.979 0.949 0.923 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
64. Y37E3.15 npp-13 7250 7.475 0.951 0.899 0.927 0.899 0.915 0.945 0.972 0.967 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
65. W01G7.3 rpb-11 7826 7.475 0.961 0.901 0.953 0.901 0.911 0.961 0.949 0.938 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
66. B0240.4 npp-22 5510 7.474 0.915 0.910 0.952 0.910 0.928 0.954 0.955 0.950 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
67. C36B1.5 prp-4 2714 7.474 0.925 0.917 0.916 0.917 0.919 0.972 0.963 0.945 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
68. T06A10.4 lsy-13 7631 7.473 0.935 0.937 0.938 0.937 0.926 0.962 0.927 0.911
69. B0252.4 cyn-10 3765 7.472 0.947 0.915 0.893 0.915 0.953 0.926 0.953 0.970 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
70. K05C4.7 K05C4.7 3429 7.47 0.886 0.921 0.956 0.921 0.909 0.980 0.941 0.956 Armadillo repeat-containing protein 1 [Source:RefSeq peptide;Acc:NP_493565]
71. F10E9.8 sas-4 3703 7.468 0.934 0.920 0.926 0.920 0.967 0.949 0.944 0.908 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
72. C33H5.15 sgo-1 3674 7.466 0.947 0.888 0.911 0.888 0.932 0.960 0.980 0.960 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
73. F52F12.4 lsl-1 4055 7.466 0.908 0.905 0.947 0.905 0.914 0.977 0.968 0.942 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
74. C48B4.11 C48B4.11 4384 7.466 0.919 0.914 0.957 0.914 0.907 0.979 0.924 0.952
75. C06A1.5 rpb-6 7515 7.465 0.937 0.889 0.920 0.889 0.956 0.991 0.945 0.938 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
76. C34E10.2 gop-2 5684 7.465 0.954 0.912 0.959 0.912 0.910 0.955 0.944 0.919 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
77. W02B12.3 rsp-1 9235 7.465 0.968 0.905 0.969 0.905 0.893 0.988 0.887 0.950 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
78. T01E8.6 mrps-14 9328 7.465 0.930 0.903 0.906 0.903 0.956 0.962 0.964 0.941 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
79. F58E10.3 ddx-17 15107 7.464 0.961 0.895 0.962 0.895 0.898 0.957 0.935 0.961 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
80. C26D10.1 ran-3 11111 7.464 0.958 0.907 0.950 0.907 0.898 0.984 0.951 0.909 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
81. ZK686.4 snu-23 9040 7.463 0.958 0.928 0.961 0.928 0.926 0.920 0.916 0.926 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
82. F26B1.3 ima-2 18826 7.463 0.952 0.893 0.955 0.893 0.911 0.979 0.933 0.947 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
83. Y43F4B.4 npp-18 4780 7.461 0.956 0.903 0.921 0.903 0.976 0.943 0.932 0.927 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
84. C18G1.5 hil-4 21692 7.461 0.954 0.917 0.956 0.917 0.902 0.942 0.901 0.972 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
85. CC4.3 smu-1 4169 7.46 0.966 0.882 0.947 0.882 0.935 0.949 0.942 0.957 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
86. Y116A8C.34 cyn-13 2972 7.46 0.963 0.905 0.933 0.905 0.891 0.961 0.968 0.934 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
87. F28H1.3 aars-2 13537 7.459 0.951 0.899 0.931 0.899 0.920 0.951 0.939 0.969 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
88. T23B5.1 prmt-3 10677 7.459 0.941 0.915 0.968 0.915 0.906 0.943 0.926 0.945 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
89. T14B4.3 T14B4.3 2875 7.459 0.902 0.907 0.935 0.907 0.946 0.948 0.939 0.975
90. F56D2.6 ddx-15 12282 7.458 0.909 0.918 0.942 0.918 0.904 0.976 0.909 0.982 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
91. Y47D3A.26 smc-3 6256 7.458 0.901 0.893 0.968 0.893 0.959 0.954 0.964 0.926 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
92. K11D12.2 pqn-51 15951 7.457 0.941 0.934 0.950 0.934 0.940 0.914 0.935 0.909 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
93. C09G9.2 npp-23 2886 7.457 0.945 0.920 0.916 0.920 0.871 0.980 0.964 0.941 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_501537]
94. F14D2.13 bath-28 1965 7.457 0.900 0.958 0.911 0.958 0.959 0.956 0.946 0.869 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_871999]
95. K07A1.12 lin-53 15817 7.456 0.965 0.916 0.947 0.916 0.937 0.957 0.914 0.904 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
96. F10E9.7 F10E9.7 1842 7.456 0.968 0.869 0.942 0.869 0.926 0.959 0.953 0.970
97. Y73B6BL.3 exos-2 2624 7.455 0.963 0.914 0.940 0.914 0.958 0.935 0.939 0.892 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
98. K02F2.4 ulp-5 3433 7.455 0.897 0.915 0.955 0.915 0.903 0.976 0.955 0.939 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
99. K04G7.11 K04G7.11 6153 7.454 0.916 0.925 0.928 0.925 0.944 0.953 0.924 0.939 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
100. R06F6.1 cdl-1 14167 7.453 0.908 0.902 0.927 0.902 0.932 0.977 0.956 0.949 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA