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Results for R53.6

Gene ID Gene Name Reads Transcripts Annotation
R53.6 psf-1 4721 R53.6.1, R53.6.2 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]

Genes with expression patterns similar to R53.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R53.6 psf-1 4721 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
2. K06A5.7 cdc-25.1 14961 7.731 0.946 0.955 0.981 0.955 0.991 0.958 0.967 0.978 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
3. F26B1.3 ima-2 18826 7.722 0.960 0.961 0.971 0.961 0.984 0.985 0.974 0.926 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
4. C33H5.15 sgo-1 3674 7.715 0.962 0.957 0.953 0.957 0.976 0.982 0.938 0.990 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
5. F23F1.1 nfyc-1 9983 7.714 0.947 0.949 0.959 0.949 0.988 0.981 0.963 0.978 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
6. Y37D8A.9 mrg-1 14369 7.709 0.963 0.962 0.949 0.962 0.990 0.989 0.957 0.937 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
7. F52C9.7 mog-3 9880 7.705 0.968 0.965 0.952 0.965 0.989 0.958 0.950 0.958 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
8. K01G5.4 ran-1 32379 7.698 0.966 0.962 0.963 0.962 0.951 0.965 0.985 0.944 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
9. F32D1.10 mcm-7 21233 7.697 0.950 0.969 0.957 0.969 0.969 0.988 0.941 0.954 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
10. C26E6.7 eri-9 8069 7.694 0.964 0.962 0.957 0.962 0.983 0.975 0.955 0.936 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
11. EEED8.1 tofu-6 3962 7.684 0.960 0.952 0.978 0.952 0.966 0.980 0.965 0.931 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
12. W03D2.4 pcn-1 20288 7.684 0.957 0.962 0.982 0.962 0.951 0.963 0.962 0.945 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
13. K04G7.11 K04G7.11 6153 7.683 0.944 0.968 0.970 0.968 0.950 0.979 0.942 0.962 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
14. B0035.3 B0035.3 4118 7.682 0.972 0.973 0.936 0.973 0.961 0.947 0.937 0.983
15. C25A1.4 C25A1.4 15507 7.681 0.961 0.947 0.968 0.947 0.988 0.970 0.948 0.952
16. R06F6.1 cdl-1 14167 7.68 0.941 0.965 0.964 0.965 0.990 0.990 0.949 0.916 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
17. F33H2.5 pole-1 3734 7.678 0.951 0.966 0.945 0.966 0.953 0.988 0.945 0.964 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
18. F10E9.7 F10E9.7 1842 7.672 0.955 0.951 0.960 0.951 0.981 0.969 0.959 0.946
19. C25D7.6 mcm-3 15241 7.672 0.938 0.963 0.988 0.963 0.962 0.954 0.971 0.933 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
20. F21D5.2 otub-3 8469 7.671 0.930 0.953 0.982 0.953 0.975 0.954 0.977 0.947 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_001255319]
21. Y17G7A.1 hmg-12 29989 7.668 0.936 0.944 0.940 0.944 0.972 0.983 0.955 0.994 HMG [Source:RefSeq peptide;Acc:NP_496544]
22. T23H2.1 npp-12 12425 7.665 0.937 0.953 0.957 0.953 0.972 0.983 0.947 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
23. R12C12.2 ran-5 14517 7.664 0.952 0.952 0.956 0.952 0.969 0.952 0.972 0.959 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
24. C27B7.1 spr-2 14958 7.662 0.968 0.962 0.959 0.962 0.946 0.962 0.918 0.985 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
25. F48E8.7 skpt-1 2308 7.659 0.930 0.937 0.985 0.937 0.970 0.985 0.955 0.960 SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
26. ZK632.1 mcm-6 9164 7.655 0.955 0.975 0.976 0.975 0.968 0.990 0.951 0.865 DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
27. C37A2.4 cye-1 4158 7.653 0.940 0.964 0.942 0.964 0.985 0.991 0.913 0.954 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
28. T26A5.7 set-1 6948 7.653 0.945 0.965 0.948 0.965 0.963 0.971 0.956 0.940 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
29. F53A3.2 polh-1 2467 7.653 0.892 0.956 0.947 0.956 0.978 0.972 0.969 0.983 POLH (DNA polymerase eta) homolog [Source:RefSeq peptide;Acc:NP_497480]
30. Y37D8A.11 cec-7 8801 7.65 0.903 0.952 0.926 0.952 0.986 0.978 0.985 0.968 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
31. C05C8.6 hpo-9 8263 7.648 0.947 0.950 0.955 0.950 0.966 0.968 0.934 0.978
32. Y41D4B.19 npp-8 12992 7.648 0.942 0.943 0.936 0.943 0.986 0.972 0.972 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
33. C02B10.5 C02B10.5 9171 7.644 0.961 0.950 0.948 0.950 0.954 0.970 0.935 0.976
34. F59A2.1 npp-9 34375 7.642 0.946 0.930 0.928 0.930 0.978 0.992 0.973 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
35. Y17G7B.5 mcm-2 6246 7.64 0.950 0.948 0.941 0.948 0.975 0.966 0.943 0.969 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
36. B0252.4 cyn-10 3765 7.638 0.978 0.955 0.960 0.955 0.958 0.928 0.942 0.962 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
37. F58F6.4 rfc-2 2074 7.638 0.930 0.954 0.938 0.954 0.989 0.980 0.939 0.954 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
38. F25B3.6 rtfo-1 11965 7.637 0.958 0.961 0.961 0.961 0.972 0.964 0.963 0.897 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
39. F37A4.9 bath-41 2558 7.637 0.965 0.972 0.964 0.972 0.915 0.975 0.915 0.959 BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
40. K07A12.2 egg-6 18331 7.636 0.935 0.970 0.970 0.970 0.979 0.972 0.933 0.907 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
41. R07E5.14 rnp-4 11659 7.636 0.962 0.950 0.942 0.950 0.989 0.966 0.938 0.939 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
42. W03G1.6 pig-1 5015 7.633 0.927 0.949 0.978 0.949 0.976 0.976 0.933 0.945 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
43. W01G7.3 rpb-11 7826 7.633 0.951 0.947 0.977 0.947 0.937 0.976 0.956 0.942 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
44. F45E12.2 brf-1 4667 7.632 0.936 0.972 0.940 0.972 0.974 0.967 0.940 0.931 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
45. C09G9.2 npp-23 2886 7.632 0.951 0.957 0.951 0.957 0.954 0.974 0.938 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_501537]
46. T28D9.2 rsp-5 6460 7.632 0.945 0.920 0.920 0.920 0.988 0.992 0.978 0.969 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
47. JC8.6 lin-54 5789 7.632 0.936 0.956 0.976 0.956 0.972 0.944 0.959 0.933
48. B0240.4 npp-22 5510 7.629 0.944 0.970 0.978 0.970 0.976 0.975 0.912 0.904 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
49. Y113G7B.5 fog-2 2753 7.629 0.962 0.925 0.920 0.925 0.982 0.980 0.972 0.963 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
50. Y55F3AM.12 dcap-1 8679 7.627 0.940 0.964 0.961 0.964 0.991 0.968 0.918 0.921 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
51. F31E3.3 rfc-4 3828 7.627 0.965 0.949 0.970 0.949 0.944 0.971 0.957 0.922 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
52. C18G1.5 hil-4 21692 7.626 0.959 0.968 0.981 0.968 0.943 0.944 0.927 0.936 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
53. F10E9.8 sas-4 3703 7.624 0.935 0.951 0.960 0.951 0.983 0.964 0.947 0.933 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
54. Y46G5A.5 pisy-1 13040 7.622 0.927 0.941 0.962 0.941 0.971 0.956 0.948 0.976 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
55. Y106G6H.15 ska-1 2362 7.621 0.975 0.944 0.967 0.944 0.923 0.972 0.943 0.953 Spindle and kinetochore-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWS0]
56. D1081.8 cdc-5L 8553 7.62 0.958 0.964 0.958 0.964 0.931 0.968 0.886 0.991 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
57. ZK1010.3 frg-1 3533 7.62 0.956 0.960 0.936 0.960 0.974 0.936 0.960 0.938 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
58. C41D11.5 cmt-1 2725 7.619 0.949 0.984 0.977 0.984 0.959 0.970 0.873 0.923 p31CoMeT related [Source:RefSeq peptide;Acc:NP_491373]
59. T23B5.1 prmt-3 10677 7.619 0.955 0.970 0.951 0.970 0.967 0.925 0.938 0.943 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
60. K07A1.12 lin-53 15817 7.617 0.955 0.963 0.966 0.963 0.975 0.965 0.950 0.880 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
61. W02D9.1 pri-2 6048 7.617 0.952 0.954 0.967 0.954 0.960 0.932 0.933 0.965 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
62. Y69A2AR.30 mdf-2 6403 7.616 0.950 0.947 0.959 0.947 0.977 0.980 0.932 0.924 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
63. M03C11.4 hat-1 3839 7.616 0.942 0.949 0.990 0.949 0.966 0.964 0.939 0.917 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
64. Y43C5A.5 thk-1 2504 7.616 0.957 0.944 0.951 0.944 0.950 0.959 0.964 0.947 Thymidine kinase [Source:RefSeq peptide;Acc:NP_001255477]
65. C35D10.9 ced-4 3446 7.616 0.927 0.962 0.933 0.962 0.971 0.940 0.972 0.949 Cell death protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P30429]
66. T09A5.8 cec-3 5813 7.615 0.936 0.962 0.992 0.962 0.965 0.936 0.930 0.932 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
67. T25G3.3 T25G3.3 7285 7.615 0.979 0.912 0.969 0.912 0.969 0.950 0.941 0.983
68. B0336.1 wrm-1 8284 7.614 0.956 0.921 0.963 0.921 0.983 0.976 0.927 0.967 Armadillo repeat-containing protein wrm-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10953]
69. T24D1.5 har-2 2882 7.614 0.958 0.957 0.968 0.957 0.950 0.937 0.975 0.912
70. F58A4.4 pri-1 1493 7.614 0.923 0.960 0.928 0.960 0.980 0.961 0.939 0.963 DNA primase small subunit [Source:UniProtKB/Swiss-Prot;Acc:P34471]
71. Y47G6A.8 crn-1 3494 7.613 0.939 0.973 0.960 0.973 0.920 0.965 0.909 0.974 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
72. Y65B4BL.2 deps-1 18277 7.613 0.943 0.953 0.967 0.953 0.948 0.965 0.907 0.977
73. Y73B6BL.38 puf-11 15511 7.611 0.941 0.915 0.971 0.915 0.961 0.964 0.971 0.973 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_741425]
74. K02F3.11 rnp-5 6205 7.611 0.958 0.948 0.959 0.948 0.947 0.986 0.924 0.941 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
75. K07A1.2 dut-1 5203 7.61 0.938 0.955 0.971 0.955 0.956 0.997 0.945 0.893 DeoxyUTPase [Source:RefSeq peptide;Acc:NP_001021553]
76. F10B5.5 pch-2 2299 7.609 0.970 0.965 0.917 0.965 0.929 0.965 0.950 0.948 Putative pachytene checkpoint protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09535]
77. T05H4.14 gad-1 7979 7.606 0.960 0.956 0.968 0.956 0.969 0.975 0.910 0.912 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
78. C55B7.1 glh-2 3622 7.605 0.961 0.924 0.941 0.924 0.973 0.978 0.960 0.944 ATP-dependent RNA helicase glh-2 [Source:UniProtKB/Swiss-Prot;Acc:Q966L9]
79. T22C1.3 T22C1.3 2305 7.605 0.940 0.949 0.963 0.949 0.977 0.941 0.932 0.954
80. F53F10.5 npp-11 3378 7.605 0.944 0.971 0.930 0.971 0.951 0.991 0.894 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
81. Y48G1A.5 xpo-2 11748 7.602 0.916 0.945 0.971 0.945 0.992 0.971 0.950 0.912 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
82. Y43E12A.1 cyb-2.1 12500 7.601 0.943 0.964 0.948 0.964 0.973 0.969 0.932 0.908 CYclin B [Source:RefSeq peptide;Acc:NP_502047]
83. F41H10.4 F41H10.4 3295 7.6 0.956 0.950 0.908 0.950 0.960 0.966 0.954 0.956
84. K08E7.1 eak-7 18960 7.6 0.967 0.965 0.954 0.965 0.965 0.921 0.928 0.935 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
85. Y71G12B.9 lin-65 7476 7.598 0.917 0.935 0.951 0.935 0.990 0.986 0.955 0.929 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
86. F59E10.1 orc-2 4698 7.598 0.953 0.956 0.965 0.956 0.973 0.955 0.950 0.890 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
87. F30F8.3 gras-1 5902 7.598 0.961 0.950 0.971 0.950 0.964 0.967 0.876 0.959 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
88. Y37E3.3 rpb-10 4051 7.596 0.924 0.955 0.932 0.955 0.984 0.984 0.942 0.920 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
89. C48B4.11 C48B4.11 4384 7.595 0.905 0.946 0.978 0.946 0.959 0.972 0.960 0.929
90. C02F5.4 cids-1 3125 7.595 0.971 0.949 0.943 0.949 0.946 0.971 0.957 0.909 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
91. Y32F6A.1 set-22 2474 7.595 0.928 0.943 0.964 0.943 0.969 0.944 0.914 0.990 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]
92. F10G7.3 unc-85 5206 7.595 0.917 0.955 0.912 0.955 0.971 0.991 0.956 0.938 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
93. Y39G10AR.7 ekl-7 7072 7.593 0.877 0.938 0.950 0.938 0.964 0.991 0.954 0.981
94. F43G9.9 cpn-1 14505 7.593 0.963 0.960 0.943 0.960 0.928 0.962 0.904 0.973 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
95. T19B4.2 npp-7 13073 7.593 0.922 0.961 0.905 0.961 0.961 0.962 0.970 0.951 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
96. Y54E2A.3 tac-1 6308 7.592 0.955 0.960 0.953 0.960 0.956 0.916 0.931 0.961 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
97. T24H10.3 dnj-23 11446 7.59 0.962 0.975 0.971 0.975 0.962 0.950 0.931 0.864 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
98. F18A11.1 puf-6 11201 7.59 0.934 0.948 0.962 0.948 0.933 0.936 0.949 0.980 Pumilio domain-containing protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O01322]
99. R53.2 dtmk-1 6821 7.589 0.965 0.952 0.924 0.952 0.963 0.988 0.923 0.922 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
100. Y56A3A.17 npp-16 5391 7.588 0.964 0.940 0.922 0.940 0.962 0.971 0.922 0.967 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA