C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for B0252.4

Gene ID Gene Name Reads Transcripts Annotation
B0252.4 cyn-10 3765 B0252.4a, B0252.4b Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]

Genes with expression patterns similar to B0252.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0252.4 cyn-10 3765 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
2. F23F1.1 nfyc-1 9983 7.734 0.975 0.970 0.935 0.970 0.976 0.970 0.979 0.959 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
3. C18G1.5 hil-4 21692 7.728 0.965 0.968 0.955 0.968 0.967 0.988 0.959 0.958 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
4. T09A5.8 cec-3 5813 7.722 0.940 0.969 0.952 0.969 0.976 0.986 0.966 0.964 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
5. W02F12.6 sna-1 7338 7.72 0.976 0.971 0.951 0.971 0.989 0.965 0.962 0.935 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
6. Y73F8A.34 tag-349 7966 7.717 0.993 0.973 0.932 0.973 0.963 0.987 0.949 0.947
7. Y71G12B.1 chaf-2 3451 7.693 0.969 0.971 0.955 0.971 0.955 0.956 0.955 0.961 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
8. K12C11.2 smo-1 12784 7.692 0.976 0.937 0.945 0.937 0.972 0.984 0.986 0.955 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
9. F52C9.7 mog-3 9880 7.688 0.973 0.979 0.904 0.979 0.977 0.946 0.979 0.951 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
10. C36B1.3 rpb-3 4442 7.687 0.960 0.969 0.950 0.969 0.972 0.976 0.962 0.929 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
11. T12D8.3 acbp-5 6816 7.686 0.961 0.964 0.945 0.964 0.965 0.933 0.972 0.982 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
12. Y65B4BL.2 deps-1 18277 7.682 0.972 0.967 0.934 0.967 0.976 0.961 0.957 0.948
13. C39E9.13 rfc-3 9443 7.679 0.970 0.970 0.935 0.970 0.973 0.981 0.973 0.907 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
14. C27B7.1 spr-2 14958 7.679 0.983 0.972 0.918 0.972 0.968 0.928 0.968 0.970 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
15. C48B4.11 C48B4.11 4384 7.678 0.949 0.973 0.957 0.973 0.958 0.958 0.967 0.943
16. K01G5.4 ran-1 32379 7.675 0.975 0.975 0.934 0.975 0.967 0.952 0.961 0.936 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
17. T20G5.11 rde-4 3966 7.666 0.956 0.957 0.922 0.957 0.963 0.976 0.953 0.982 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
18. Y47G6A.8 crn-1 3494 7.666 0.968 0.960 0.920 0.960 0.960 0.964 0.955 0.979 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
19. F58F6.4 rfc-2 2074 7.665 0.951 0.969 0.936 0.969 0.956 0.959 0.963 0.962 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
20. Y110A7A.8 prp-31 4436 7.664 0.971 0.949 0.914 0.949 0.968 0.969 0.973 0.971 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
21. E01A2.4 let-504 9788 7.662 0.913 0.961 0.926 0.961 0.984 0.974 0.957 0.986
22. Y17G7A.1 hmg-12 29989 7.661 0.960 0.967 0.933 0.967 0.951 0.948 0.973 0.962 HMG [Source:RefSeq peptide;Acc:NP_496544]
23. F33H2.5 pole-1 3734 7.657 0.963 0.981 0.913 0.981 0.944 0.943 0.984 0.948 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
24. W01G7.3 rpb-11 7826 7.655 0.958 0.953 0.941 0.953 0.968 0.952 0.983 0.947 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
25. Y54E5A.4 npp-4 6288 7.654 0.948 0.968 0.908 0.968 0.971 0.964 0.972 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
26. W03D2.4 pcn-1 20288 7.652 0.954 0.964 0.948 0.964 0.950 0.966 0.934 0.972 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
27. EEED8.1 tofu-6 3962 7.652 0.969 0.962 0.971 0.962 0.961 0.935 0.933 0.959 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
28. Y111B2A.18 rsp-3 43731 7.651 0.971 0.965 0.943 0.965 0.973 0.941 0.966 0.927 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
29. F43E2.2 rpb-4 2812 7.645 0.977 0.960 0.908 0.960 0.962 0.982 0.966 0.930 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_495544]
30. F32H2.4 thoc-3 3861 7.645 0.961 0.966 0.911 0.966 0.988 0.938 0.949 0.966 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
31. W03G1.6 pig-1 5015 7.642 0.951 0.964 0.928 0.964 0.986 0.966 0.988 0.895 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
32. C16C8.5 C16C8.5 1129 7.64 0.969 0.934 0.934 0.934 0.958 0.960 0.971 0.980
33. T26A5.7 set-1 6948 7.64 0.956 0.968 0.900 0.968 0.978 0.954 0.956 0.960 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
34. C48E7.3 lpd-2 10330 7.64 0.968 0.948 0.938 0.948 0.962 0.954 0.957 0.965 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
35. C49C3.7 C49C3.7 3004 7.638 0.974 0.966 0.940 0.966 0.951 0.973 0.915 0.953
36. R53.6 psf-1 4721 7.638 0.978 0.955 0.960 0.955 0.958 0.928 0.942 0.962 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
37. T10C6.4 srx-44 8454 7.636 0.968 0.973 0.905 0.973 0.960 0.946 0.964 0.947 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
38. B0035.3 B0035.3 4118 7.635 0.983 0.968 0.886 0.968 0.972 0.944 0.948 0.966
39. M03C11.4 hat-1 3839 7.635 0.957 0.951 0.938 0.951 0.970 0.957 0.954 0.957 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
40. C36A4.8 brc-1 1664 7.633 0.927 0.945 0.921 0.945 0.984 0.960 0.979 0.972 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
41. C14B1.9 C14B1.9 6483 7.633 0.979 0.938 0.961 0.938 0.955 0.967 0.961 0.934
42. B0205.1 B0205.1 2403 7.633 0.977 0.955 0.961 0.955 0.946 0.960 0.933 0.946
43. W02D9.1 pri-2 6048 7.632 0.955 0.960 0.930 0.960 0.963 0.968 0.961 0.935 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
44. D1081.8 cdc-5L 8553 7.631 0.974 0.957 0.920 0.957 0.954 0.963 0.949 0.957 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
45. W02B12.3 rsp-1 9235 7.63 0.964 0.968 0.919 0.968 0.948 0.962 0.965 0.936 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
46. C09G4.3 cks-1 17852 7.629 0.985 0.963 0.911 0.963 0.983 0.946 0.950 0.928 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
47. Y47G6A.2 inx-22 3576 7.629 0.962 0.988 0.879 0.988 0.975 0.946 0.936 0.955 Innexin [Source:RefSeq peptide;Acc:NP_491186]
48. T10F2.4 prp-19 11298 7.629 0.957 0.956 0.906 0.956 0.977 0.958 0.959 0.960 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
49. B0495.6 moa-2 6366 7.627 0.976 0.957 0.922 0.957 0.979 0.942 0.942 0.952
50. F56D1.7 daz-1 23684 7.627 0.935 0.941 0.901 0.941 0.976 0.978 0.982 0.973 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
51. W01B6.9 ndc-80 4670 7.624 0.965 0.973 0.885 0.973 0.971 0.958 0.934 0.965 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
52. F10B5.5 pch-2 2299 7.624 0.961 0.959 0.918 0.959 0.954 0.978 0.952 0.943 Putative pachytene checkpoint protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09535]
53. K02F3.11 rnp-5 6205 7.623 0.978 0.966 0.919 0.966 0.978 0.959 0.931 0.926 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
54. Y54E2A.3 tac-1 6308 7.623 0.964 0.930 0.936 0.930 0.985 0.962 0.974 0.942 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
55. F35G12.9 apc-11 2538 7.622 0.955 0.941 0.968 0.941 0.978 0.901 0.968 0.970 Anaphase Promoting Complex; see also mat [Source:RefSeq peptide;Acc:NP_497937]
56. F32A5.7 lsm-4 3785 7.62 0.979 0.964 0.916 0.964 0.982 0.916 0.960 0.939 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
57. Y53H1A.5 nfya-2 4166 7.619 0.965 0.941 0.937 0.941 0.947 0.978 0.940 0.970 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
58. F32D1.10 mcm-7 21233 7.618 0.951 0.960 0.910 0.960 0.956 0.937 0.964 0.980 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
59. C08B11.5 sap-49 10553 7.616 0.955 0.957 0.851 0.957 0.982 0.961 0.980 0.973 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
60. C08B11.6 arp-6 4646 7.613 0.973 0.938 0.931 0.938 0.957 0.971 0.949 0.956 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
61. T23B5.1 prmt-3 10677 7.612 0.968 0.968 0.910 0.968 0.955 0.954 0.940 0.949 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
62. B0464.9 B0464.9 2997 7.612 0.944 0.947 0.947 0.947 0.981 0.956 0.943 0.947 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
63. T24F1.2 samp-1 8422 7.609 0.974 0.935 0.946 0.935 0.960 0.955 0.922 0.982 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
64. T05H10.2 apn-1 5628 7.608 0.964 0.960 0.921 0.960 0.967 0.948 0.968 0.920 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
65. B0025.2 csn-2 5205 7.608 0.944 0.967 0.878 0.967 0.976 0.958 0.977 0.941 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
66. F28B3.8 imb-1 7515 7.607 0.933 0.950 0.924 0.950 0.975 0.979 0.980 0.916 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
67. F36A2.1 cids-2 4551 7.606 0.963 0.937 0.946 0.937 0.957 0.946 0.978 0.942 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
68. F55G1.8 plk-3 12036 7.604 0.969 0.949 0.905 0.949 0.979 0.967 0.948 0.938 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
69. F10E9.7 F10E9.7 1842 7.603 0.968 0.938 0.926 0.938 0.968 0.938 0.955 0.972
70. Y34D9A.4 spd-1 3396 7.603 0.966 0.946 0.937 0.946 0.937 0.960 0.957 0.954 SPD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED58]
71. C03D6.4 npp-14 4889 7.602 0.943 0.968 0.939 0.968 0.973 0.967 0.923 0.921 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
72. F53F10.5 npp-11 3378 7.601 0.960 0.960 0.894 0.960 0.975 0.933 0.961 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
73. F31E3.3 rfc-4 3828 7.6 0.964 0.959 0.918 0.959 0.983 0.947 0.984 0.886 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
74. K02F2.3 teg-4 3873 7.6 0.935 0.945 0.914 0.945 0.971 0.983 0.972 0.935 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
75. Y61A9LA.8 sut-2 11388 7.599 0.933 0.961 0.941 0.961 0.966 0.967 0.942 0.928 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
76. F42A6.7 hrp-1 28201 7.599 0.956 0.960 0.887 0.960 0.981 0.966 0.965 0.924 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
77. T01G9.4 npp-2 5361 7.599 0.961 0.959 0.920 0.959 0.947 0.966 0.936 0.951 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
78. F18E2.3 scc-3 13464 7.598 0.965 0.957 0.901 0.957 0.938 0.975 0.924 0.981 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
79. T23H2.1 npp-12 12425 7.598 0.960 0.960 0.931 0.960 0.956 0.935 0.958 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
80. F10E9.8 sas-4 3703 7.596 0.965 0.959 0.932 0.959 0.962 0.960 0.947 0.912 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
81. K11D12.2 pqn-51 15951 7.595 0.965 0.964 0.893 0.964 0.985 0.941 0.948 0.935 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
82. F26B1.3 ima-2 18826 7.595 0.963 0.967 0.940 0.967 0.931 0.936 0.943 0.948 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
83. C05C8.6 hpo-9 8263 7.594 0.970 0.947 0.903 0.947 0.985 0.944 0.973 0.925
84. T05F1.6 hsr-9 13312 7.593 0.958 0.971 0.900 0.971 0.938 0.959 0.929 0.967
85. T21D12.3 pqbp-1.1 5755 7.593 0.970 0.940 0.909 0.940 0.962 0.979 0.987 0.906 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
86. Y38F2AR.1 eri-5 1443 7.591 0.965 0.946 0.926 0.946 0.970 0.979 0.889 0.970 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_500199]
87. ZK328.2 eftu-2 7040 7.591 0.902 0.968 0.927 0.968 0.960 0.959 0.940 0.967 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
88. C26E6.5 fsn-1 6615 7.59 0.968 0.962 0.884 0.962 0.958 0.959 0.933 0.964 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
89. H27M09.3 syp-4 5331 7.59 0.917 0.960 0.883 0.960 0.973 0.973 0.968 0.956
90. C25D7.8 otub-1 7941 7.589 0.955 0.960 0.913 0.960 0.981 0.932 0.948 0.940 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
91. C25D7.6 mcm-3 15241 7.589 0.946 0.963 0.968 0.963 0.953 0.931 0.917 0.948 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
92. R12C12.2 ran-5 14517 7.589 0.967 0.960 0.922 0.960 0.968 0.919 0.959 0.934 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
93. ZK970.3 mdt-22 1925 7.588 0.969 0.940 0.877 0.940 0.967 0.968 0.950 0.977 Mediator of RNA polymerase II transcription subunit 22 [Source:UniProtKB/Swiss-Prot;Acc:Q23679]
94. Y49E10.3 pph-4.2 8662 7.586 0.959 0.960 0.950 0.960 0.935 0.923 0.941 0.958 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
95. C17E4.10 C17E4.10 7034 7.585 0.952 0.932 0.910 0.932 0.954 0.986 0.956 0.963
96. Y37E3.15 npp-13 7250 7.585 0.960 0.966 0.883 0.966 0.960 0.922 0.971 0.957 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
97. F32H2.1 snpc-4 7581 7.584 0.950 0.963 0.882 0.963 0.956 0.949 0.957 0.964 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
98. K06A5.7 cdc-25.1 14961 7.581 0.954 0.948 0.941 0.948 0.962 0.915 0.941 0.972 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
99. F25B5.2 nop-1 4127 7.581 0.950 0.945 0.915 0.945 0.982 0.985 0.920 0.939 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
100. Y38A10A.6 smut-1 1589 7.58 0.925 0.942 0.948 0.942 0.974 0.962 0.939 0.948 Synthetic MUTator [Source:RefSeq peptide;Acc:NP_504574]

There are 2634 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA