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Results for B0240.4

Gene ID Gene Name Reads Transcripts Annotation
B0240.4 npp-22 5510 B0240.4 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]

Genes with expression patterns similar to B0240.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0240.4 npp-22 5510 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
2. R06F6.1 cdl-1 14167 7.872 0.976 0.988 0.980 0.988 0.985 0.988 0.977 0.990 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
3. Y48G1A.5 xpo-2 11748 7.804 0.963 0.976 0.983 0.976 0.984 0.984 0.968 0.970 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
4. Y69A2AR.30 mdf-2 6403 7.775 0.948 0.979 0.961 0.979 0.982 0.971 0.981 0.974 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
5. Y37D8A.9 mrg-1 14369 7.764 0.959 0.969 0.967 0.969 0.984 0.974 0.961 0.981 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
6. W01A8.5 tofu-5 5678 7.751 0.968 0.974 0.941 0.974 0.981 0.972 0.973 0.968 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
7. F32D1.10 mcm-7 21233 7.751 0.977 0.983 0.979 0.983 0.971 0.944 0.962 0.952 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
8. F26B1.3 ima-2 18826 7.727 0.937 0.984 0.976 0.984 0.946 0.963 0.949 0.988 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
9. Y41D4B.13 ced-2 10100 7.712 0.958 0.972 0.969 0.972 0.967 0.964 0.956 0.954 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
10. EEED8.1 tofu-6 3962 7.707 0.948 0.984 0.960 0.984 0.968 0.961 0.945 0.957 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
11. ZK632.1 mcm-6 9164 7.706 0.955 0.974 0.967 0.974 0.985 0.969 0.915 0.967 DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
12. K04G2.2 aho-3 15189 7.696 0.970 0.972 0.969 0.972 0.956 0.955 0.958 0.944
13. F21D5.2 otub-3 8469 7.695 0.969 0.981 0.985 0.981 0.992 0.954 0.928 0.905 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_001255319]
14. F53G12.5 mex-3 29076 7.693 0.962 0.980 0.969 0.980 0.942 0.956 0.918 0.986 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
15. F43G9.5 cfim-1 9169 7.69 0.889 0.981 0.962 0.981 0.984 0.967 0.956 0.970 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
16. R07E5.14 rnp-4 11659 7.689 0.923 0.966 0.946 0.966 0.986 0.967 0.968 0.967 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
17. K07A1.2 dut-1 5203 7.687 0.974 0.962 0.981 0.962 0.957 0.969 0.935 0.947 DeoxyUTPase [Source:RefSeq peptide;Acc:NP_001021553]
18. K07A1.12 lin-53 15817 7.679 0.939 0.979 0.974 0.979 0.959 0.956 0.957 0.936 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
19. C37A2.4 cye-1 4158 7.678 0.977 0.941 0.961 0.941 0.965 0.967 0.974 0.952 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
20. C26E6.7 eri-9 8069 7.674 0.938 0.974 0.953 0.974 0.985 0.982 0.948 0.920 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
21. F53F10.5 npp-11 3378 7.673 0.919 0.978 0.951 0.978 0.955 0.974 0.947 0.971 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
22. M03C11.4 hat-1 3839 7.673 0.979 0.953 0.984 0.953 0.987 0.965 0.888 0.964 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
23. C34E10.2 gop-2 5684 7.671 0.891 0.964 0.946 0.964 0.976 0.978 0.982 0.970 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
24. W03D2.4 pcn-1 20288 7.671 0.965 0.981 0.987 0.981 0.943 0.923 0.937 0.954 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
25. T24D1.5 har-2 2882 7.669 0.932 0.975 0.976 0.975 0.963 0.966 0.912 0.970
26. F48E8.7 skpt-1 2308 7.666 0.967 0.958 0.974 0.958 0.952 0.972 0.943 0.942 SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
27. ZK353.1 cyy-1 5745 7.659 0.956 0.968 0.948 0.968 0.980 0.979 0.938 0.922 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
28. F59B2.6 zif-1 10453 7.657 0.964 0.974 0.982 0.974 0.935 0.933 0.942 0.953 Zinc finger-interacting factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P34482]
29. T14G10.6 tsp-12 10308 7.655 0.974 0.988 0.957 0.988 0.931 0.957 0.933 0.927 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
30. JC8.6 lin-54 5789 7.651 0.920 0.962 0.963 0.962 0.975 0.965 0.935 0.969
31. K07A12.2 egg-6 18331 7.65 0.941 0.977 0.978 0.977 0.970 0.960 0.944 0.903 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
32. Y41D4B.19 npp-8 12992 7.649 0.947 0.950 0.942 0.950 0.976 0.982 0.961 0.941 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
33. F25B3.6 rtfo-1 11965 7.641 0.962 0.980 0.982 0.980 0.973 0.963 0.926 0.875 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
34. C25D7.6 mcm-3 15241 7.641 0.975 0.976 0.971 0.976 0.949 0.911 0.931 0.952 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
35. H26D21.2 msh-2 2115 7.641 0.967 0.941 0.942 0.941 0.979 0.947 0.933 0.991 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491202]
36. R03D7.7 nos-1 8407 7.64 0.921 0.963 0.979 0.963 0.930 0.980 0.968 0.936 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
37. K04G7.11 K04G7.11 6153 7.638 0.934 0.973 0.973 0.973 0.917 0.987 0.952 0.929 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
38. W03G1.6 pig-1 5015 7.638 0.965 0.991 0.981 0.991 0.972 0.955 0.889 0.894 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
39. K06A5.7 cdc-25.1 14961 7.634 0.970 0.971 0.985 0.971 0.970 0.922 0.929 0.916 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
40. F54D5.11 F54D5.11 2756 7.632 0.957 0.923 0.986 0.923 0.961 0.979 0.968 0.935 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
41. R08C7.10 wapl-1 4967 7.632 0.958 0.961 0.984 0.961 0.959 0.968 0.931 0.910 WAPL (Drosophila Wings APart-Like cohesin interactor) [Source:RefSeq peptide;Acc:NP_500567]
42. C36B1.7 dhfr-1 2900 7.63 0.930 0.948 0.932 0.948 0.980 0.968 0.946 0.978 Putative dihydrofolate reductase [Source:UniProtKB/Swiss-Prot;Acc:Q93341]
43. R53.6 psf-1 4721 7.629 0.944 0.970 0.978 0.970 0.976 0.975 0.912 0.904 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
44. C33H5.15 sgo-1 3674 7.628 0.969 0.973 0.961 0.973 0.942 0.956 0.927 0.927 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
45. F44G4.4 tdp-1 3335 7.627 0.931 0.961 0.942 0.961 0.966 0.986 0.953 0.927 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
46. C55B7.1 glh-2 3622 7.627 0.953 0.937 0.971 0.937 0.957 0.967 0.933 0.972 ATP-dependent RNA helicase glh-2 [Source:UniProtKB/Swiss-Prot;Acc:Q966L9]
47. C36A4.5 maph-1.3 15493 7.627 0.968 0.936 0.963 0.936 0.977 0.953 0.959 0.935 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
48. Y53C10A.12 hsf-1 7899 7.626 0.928 0.960 0.987 0.960 0.941 0.935 0.952 0.963 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
49. F32A5.7 lsm-4 3785 7.626 0.930 0.975 0.951 0.975 0.954 0.957 0.938 0.946 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
50. K08E7.1 eak-7 18960 7.625 0.931 0.983 0.964 0.983 0.954 0.926 0.934 0.950 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
51. C38D4.6 pal-1 7627 7.623 0.975 0.971 0.964 0.971 0.958 0.950 0.895 0.939 Homeobox protein pal-1 [Source:UniProtKB/Swiss-Prot;Acc:P34766]
52. F59A2.1 npp-9 34375 7.621 0.903 0.960 0.917 0.960 0.963 0.984 0.973 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
53. Y113G7B.5 fog-2 2753 7.621 0.953 0.943 0.939 0.943 0.981 0.963 0.945 0.954 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
54. Y55F3AM.12 dcap-1 8679 7.62 0.893 0.974 0.973 0.974 0.980 0.974 0.935 0.917 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
55. CC4.3 smu-1 4169 7.619 0.943 0.959 0.945 0.959 0.968 0.959 0.957 0.929 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
56. T24H10.3 dnj-23 11446 7.618 0.965 0.978 0.986 0.978 0.940 0.966 0.931 0.874 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
57. C48B4.7 C48B4.7 4006 7.615 0.861 0.966 0.916 0.966 0.992 0.959 0.974 0.981
58. T26A8.1 T26A8.1 4387 7.615 0.913 0.974 0.944 0.974 0.984 0.971 0.917 0.938
59. B0336.6 abi-1 3184 7.614 0.918 0.972 0.979 0.972 0.968 0.966 0.951 0.888 ABl Interactor homolog [Source:RefSeq peptide;Acc:NP_498224]
60. T26A5.7 set-1 6948 7.614 0.985 0.984 0.961 0.984 0.932 0.951 0.887 0.930 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
61. C41D11.5 cmt-1 2725 7.613 0.957 0.967 0.989 0.967 0.959 0.981 0.875 0.918 p31CoMeT related [Source:RefSeq peptide;Acc:NP_491373]
62. R06A4.4 imb-2 10302 7.609 0.908 0.958 0.969 0.958 0.967 0.969 0.926 0.954 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
63. F52F12.4 lsl-1 4055 7.609 0.869 0.949 0.959 0.949 0.949 0.971 0.981 0.982 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
64. Y73B6BL.38 puf-11 15511 7.608 0.954 0.952 0.979 0.952 0.921 0.935 0.953 0.962 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_741425]
65. C03C10.3 rnr-2 8430 7.607 0.935 0.935 0.978 0.935 0.981 0.954 0.935 0.954 Ribonucleoside-diphosphate reductase small chain [Source:UniProtKB/Swiss-Prot;Acc:P42170]
66. C46A5.9 hcf-1 6295 7.607 0.923 0.949 0.935 0.949 0.990 0.981 0.945 0.935 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
67. Y56A3A.29 ung-1 1900 7.606 0.938 0.933 0.956 0.933 0.962 0.983 0.945 0.956 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
68. Y49E10.14 pie-1 7902 7.606 0.966 0.971 0.972 0.971 0.946 0.962 0.973 0.845 Pharynx and intestine in excess protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94131]
69. E01B7.1 E01B7.1 2501 7.604 0.953 0.975 0.980 0.975 0.977 0.916 0.939 0.889
70. T22C1.3 T22C1.3 2305 7.602 0.918 0.965 0.959 0.965 0.982 0.971 0.900 0.942
71. C25A1.4 C25A1.4 15507 7.602 0.906 0.947 0.977 0.947 0.983 0.968 0.972 0.902
72. Y73B6BL.33 hrpf-2 4443 7.602 0.947 0.947 0.926 0.947 0.966 0.965 0.963 0.941 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
73. ZK616.4 swsn-6 2791 7.601 0.951 0.972 0.946 0.972 0.968 0.913 0.935 0.944 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_500801]
74. C48D1.2 ced-3 4123 7.599 0.912 0.970 0.939 0.970 0.982 0.965 0.977 0.884 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
75. F59E10.1 orc-2 4698 7.599 0.942 0.976 0.961 0.976 0.984 0.948 0.930 0.882 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
76. K02F3.11 rnp-5 6205 7.598 0.955 0.976 0.963 0.976 0.922 0.963 0.903 0.940 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
77. F33H2.5 pole-1 3734 7.596 0.943 0.979 0.966 0.979 0.950 0.964 0.899 0.916 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
78. Y65B4BR.8 psf-3 1866 7.596 0.960 0.973 0.958 0.973 0.881 0.951 0.951 0.949 PSF (yeast Partner of Sld Five) conserved replication factor, GINS complex [Source:RefSeq peptide;Acc:NP_490748]
79. K01G5.4 ran-1 32379 7.595 0.934 0.967 0.957 0.967 0.937 0.955 0.929 0.949 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
80. F35H8.3 zfp-2 2599 7.595 0.966 0.962 0.931 0.962 0.955 0.967 0.980 0.872 Zinc Finger Protein [Source:RefSeq peptide;Acc:NP_496055]
81. F52C9.7 mog-3 9880 7.595 0.942 0.973 0.955 0.973 0.973 0.968 0.905 0.906 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
82. E02H1.3 tag-124 2189 7.595 0.894 0.957 0.936 0.957 0.977 0.958 0.951 0.965 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
83. F58F6.4 rfc-2 2074 7.594 0.931 0.979 0.914 0.979 0.971 0.942 0.900 0.978 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
84. T23G5.1 rnr-1 5022 7.591 0.945 0.974 0.971 0.974 0.953 0.913 0.925 0.936 Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q03604]
85. C14B1.4 wdr-5.1 4424 7.589 0.954 0.956 0.950 0.956 0.965 0.963 0.957 0.888 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
86. Y42G9A.6 wht-7 2348 7.588 0.932 0.964 0.965 0.964 0.965 0.982 0.903 0.913 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_001040881]
87. Y54E10A.4 fog-1 3560 7.588 0.956 0.957 0.946 0.957 0.935 0.969 0.951 0.917 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001021791]
88. R05D11.7 snrp-27 4159 7.587 0.967 0.981 0.962 0.981 0.940 0.917 0.892 0.947 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
89. T23H2.1 npp-12 12425 7.587 0.913 0.971 0.962 0.971 0.942 0.971 0.914 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
90. Y71G12B.9 lin-65 7476 7.586 0.906 0.944 0.943 0.944 0.969 0.974 0.940 0.966 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
91. K07D4.3 rpn-11 8834 7.586 0.943 0.971 0.963 0.971 0.965 0.921 0.935 0.917 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
92. W08E3.1 snr-2 14849 7.584 0.878 0.934 0.920 0.934 0.982 0.966 0.986 0.984 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
93. K10B2.3 clec-88 12854 7.584 0.926 0.948 0.944 0.948 0.971 0.965 0.974 0.908 C-type lectin domain-containing protein 88 [Source:UniProtKB/Swiss-Prot;Acc:Q86NG3]
94. F52E1.1 pos-1 32185 7.583 0.945 0.956 0.930 0.956 0.957 0.971 0.953 0.915 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
95. T09A5.8 cec-3 5813 7.583 0.938 0.982 0.983 0.982 0.946 0.926 0.850 0.976 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
96. R12C12.2 ran-5 14517 7.583 0.906 0.980 0.959 0.980 0.956 0.952 0.928 0.922 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
97. C08B11.3 swsn-7 11608 7.582 0.972 0.975 0.984 0.975 0.951 0.937 0.904 0.884 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
98. Y14H12B.2 Y14H12B.2 6496 7.582 0.908 0.935 0.959 0.935 0.939 0.969 0.962 0.975
99. Y39G10AR.13 icp-1 3445 7.581 0.913 0.954 0.942 0.954 0.979 0.954 0.936 0.949 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
100. Y45F10A.2 puf-3 22370 7.58 0.949 0.945 0.975 0.945 0.971 0.944 0.949 0.902 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_502606]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA