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Results for B0240.4

Gene ID Gene Name Reads Transcripts Annotation
B0240.4 npp-22 5510 B0240.4 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]

Genes with expression patterns similar to B0240.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0240.4 npp-22 5510 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
2. R06F6.1 cdl-1 14167 7.872 0.976 0.988 0.980 0.988 0.985 0.988 0.977 0.990 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
3. Y48G1A.5 xpo-2 11748 7.804 0.963 0.976 0.983 0.976 0.984 0.984 0.968 0.970 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
4. Y69A2AR.30 mdf-2 6403 7.775 0.948 0.979 0.961 0.979 0.982 0.971 0.981 0.974 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
5. Y37D8A.9 mrg-1 14369 7.764 0.959 0.969 0.967 0.969 0.984 0.974 0.961 0.981 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
6. F32D1.10 mcm-7 21233 7.751 0.977 0.983 0.979 0.983 0.971 0.944 0.962 0.952 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
7. W01A8.5 tofu-5 5678 7.751 0.968 0.974 0.941 0.974 0.981 0.972 0.973 0.968 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
8. F26B1.3 ima-2 18826 7.727 0.937 0.984 0.976 0.984 0.946 0.963 0.949 0.988 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
9. Y41D4B.13 ced-2 10100 7.712 0.958 0.972 0.969 0.972 0.967 0.964 0.956 0.954 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
10. EEED8.1 tofu-6 3962 7.707 0.948 0.984 0.960 0.984 0.968 0.961 0.945 0.957 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
11. ZK632.1 mcm-6 9164 7.706 0.955 0.974 0.967 0.974 0.985 0.969 0.915 0.967 DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
12. K04G2.2 aho-3 15189 7.696 0.970 0.972 0.969 0.972 0.956 0.955 0.958 0.944
13. F21D5.2 otub-3 8469 7.695 0.969 0.981 0.985 0.981 0.992 0.954 0.928 0.905 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_001255319]
14. F53G12.5 mex-3 29076 7.693 0.962 0.980 0.969 0.980 0.942 0.956 0.918 0.986 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
15. F43G9.5 cfim-1 9169 7.69 0.889 0.981 0.962 0.981 0.984 0.967 0.956 0.970 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
16. R07E5.14 rnp-4 11659 7.689 0.923 0.966 0.946 0.966 0.986 0.967 0.968 0.967 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
17. K07A1.2 dut-1 5203 7.687 0.974 0.962 0.981 0.962 0.957 0.969 0.935 0.947 DeoxyUTPase [Source:RefSeq peptide;Acc:NP_001021553]
18. K07A1.12 lin-53 15817 7.679 0.939 0.979 0.974 0.979 0.959 0.956 0.957 0.936 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
19. C37A2.4 cye-1 4158 7.678 0.977 0.941 0.961 0.941 0.965 0.967 0.974 0.952 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
20. C26E6.7 eri-9 8069 7.674 0.938 0.974 0.953 0.974 0.985 0.982 0.948 0.920 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
21. F53F10.5 npp-11 3378 7.673 0.919 0.978 0.951 0.978 0.955 0.974 0.947 0.971 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
22. M03C11.4 hat-1 3839 7.673 0.979 0.953 0.984 0.953 0.987 0.965 0.888 0.964 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
23. W03D2.4 pcn-1 20288 7.671 0.965 0.981 0.987 0.981 0.943 0.923 0.937 0.954 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
24. C34E10.2 gop-2 5684 7.671 0.891 0.964 0.946 0.964 0.976 0.978 0.982 0.970 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
25. T24D1.5 har-2 2882 7.669 0.932 0.975 0.976 0.975 0.963 0.966 0.912 0.970
26. F48E8.7 skpt-1 2308 7.666 0.967 0.958 0.974 0.958 0.952 0.972 0.943 0.942 SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
27. ZK353.1 cyy-1 5745 7.659 0.956 0.968 0.948 0.968 0.980 0.979 0.938 0.922 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
28. F59B2.6 zif-1 10453 7.657 0.964 0.974 0.982 0.974 0.935 0.933 0.942 0.953 Zinc finger-interacting factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P34482]
29. T14G10.6 tsp-12 10308 7.655 0.974 0.988 0.957 0.988 0.931 0.957 0.933 0.927 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
30. JC8.6 lin-54 5789 7.651 0.920 0.962 0.963 0.962 0.975 0.965 0.935 0.969
31. K07A12.2 egg-6 18331 7.65 0.941 0.977 0.978 0.977 0.970 0.960 0.944 0.903 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
32. Y41D4B.19 npp-8 12992 7.649 0.947 0.950 0.942 0.950 0.976 0.982 0.961 0.941 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
33. F25B3.6 rtfo-1 11965 7.641 0.962 0.980 0.982 0.980 0.973 0.963 0.926 0.875 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
34. H26D21.2 msh-2 2115 7.641 0.967 0.941 0.942 0.941 0.979 0.947 0.933 0.991 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491202]
35. C25D7.6 mcm-3 15241 7.641 0.975 0.976 0.971 0.976 0.949 0.911 0.931 0.952 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
36. R03D7.7 nos-1 8407 7.64 0.921 0.963 0.979 0.963 0.930 0.980 0.968 0.936 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
37. W03G1.6 pig-1 5015 7.638 0.965 0.991 0.981 0.991 0.972 0.955 0.889 0.894 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
38. K04G7.11 K04G7.11 6153 7.638 0.934 0.973 0.973 0.973 0.917 0.987 0.952 0.929 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
39. K06A5.7 cdc-25.1 14961 7.634 0.970 0.971 0.985 0.971 0.970 0.922 0.929 0.916 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
40. R08C7.10 wapl-1 4967 7.632 0.958 0.961 0.984 0.961 0.959 0.968 0.931 0.910 WAPL (Drosophila Wings APart-Like cohesin interactor) [Source:RefSeq peptide;Acc:NP_500567]
41. F54D5.11 F54D5.11 2756 7.632 0.957 0.923 0.986 0.923 0.961 0.979 0.968 0.935 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
42. C36B1.7 dhfr-1 2900 7.63 0.930 0.948 0.932 0.948 0.980 0.968 0.946 0.978 Putative dihydrofolate reductase [Source:UniProtKB/Swiss-Prot;Acc:Q93341]
43. R53.6 psf-1 4721 7.629 0.944 0.970 0.978 0.970 0.976 0.975 0.912 0.904 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
44. C33H5.15 sgo-1 3674 7.628 0.969 0.973 0.961 0.973 0.942 0.956 0.927 0.927 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
45. C55B7.1 glh-2 3622 7.627 0.953 0.937 0.971 0.937 0.957 0.967 0.933 0.972 ATP-dependent RNA helicase glh-2 [Source:UniProtKB/Swiss-Prot;Acc:Q966L9]
46. F44G4.4 tdp-1 3335 7.627 0.931 0.961 0.942 0.961 0.966 0.986 0.953 0.927 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
47. C36A4.5 maph-1.3 15493 7.627 0.968 0.936 0.963 0.936 0.977 0.953 0.959 0.935 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
48. Y53C10A.12 hsf-1 7899 7.626 0.928 0.960 0.987 0.960 0.941 0.935 0.952 0.963 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
49. F32A5.7 lsm-4 3785 7.626 0.930 0.975 0.951 0.975 0.954 0.957 0.938 0.946 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
50. K08E7.1 eak-7 18960 7.625 0.931 0.983 0.964 0.983 0.954 0.926 0.934 0.950 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
51. C38D4.6 pal-1 7627 7.623 0.975 0.971 0.964 0.971 0.958 0.950 0.895 0.939 Homeobox protein pal-1 [Source:UniProtKB/Swiss-Prot;Acc:P34766]
52. F59A2.1 npp-9 34375 7.621 0.903 0.960 0.917 0.960 0.963 0.984 0.973 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
53. Y113G7B.5 fog-2 2753 7.621 0.953 0.943 0.939 0.943 0.981 0.963 0.945 0.954 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
54. Y55F3AM.12 dcap-1 8679 7.62 0.893 0.974 0.973 0.974 0.980 0.974 0.935 0.917 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
55. CC4.3 smu-1 4169 7.619 0.943 0.959 0.945 0.959 0.968 0.959 0.957 0.929 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
56. T24H10.3 dnj-23 11446 7.618 0.965 0.978 0.986 0.978 0.940 0.966 0.931 0.874 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
57. C48B4.7 C48B4.7 4006 7.615 0.861 0.966 0.916 0.966 0.992 0.959 0.974 0.981
58. T26A8.1 T26A8.1 4387 7.615 0.913 0.974 0.944 0.974 0.984 0.971 0.917 0.938
59. B0336.6 abi-1 3184 7.614 0.918 0.972 0.979 0.972 0.968 0.966 0.951 0.888 ABl Interactor homolog [Source:RefSeq peptide;Acc:NP_498224]
60. T26A5.7 set-1 6948 7.614 0.985 0.984 0.961 0.984 0.932 0.951 0.887 0.930 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
61. C41D11.5 cmt-1 2725 7.613 0.957 0.967 0.989 0.967 0.959 0.981 0.875 0.918 p31CoMeT related [Source:RefSeq peptide;Acc:NP_491373]
62. R06A4.4 imb-2 10302 7.609 0.908 0.958 0.969 0.958 0.967 0.969 0.926 0.954 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
63. F52F12.4 lsl-1 4055 7.609 0.869 0.949 0.959 0.949 0.949 0.971 0.981 0.982 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
64. Y73B6BL.38 puf-11 15511 7.608 0.954 0.952 0.979 0.952 0.921 0.935 0.953 0.962 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_741425]
65. C46A5.9 hcf-1 6295 7.607 0.923 0.949 0.935 0.949 0.990 0.981 0.945 0.935 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
66. C03C10.3 rnr-2 8430 7.607 0.935 0.935 0.978 0.935 0.981 0.954 0.935 0.954 Ribonucleoside-diphosphate reductase small chain [Source:UniProtKB/Swiss-Prot;Acc:P42170]
67. Y56A3A.29 ung-1 1900 7.606 0.938 0.933 0.956 0.933 0.962 0.983 0.945 0.956 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
68. Y49E10.14 pie-1 7902 7.606 0.966 0.971 0.972 0.971 0.946 0.962 0.973 0.845 Pharynx and intestine in excess protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94131]
69. E01B7.1 E01B7.1 2501 7.604 0.953 0.975 0.980 0.975 0.977 0.916 0.939 0.889
70. Y73B6BL.33 hrpf-2 4443 7.602 0.947 0.947 0.926 0.947 0.966 0.965 0.963 0.941 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
71. C25A1.4 C25A1.4 15507 7.602 0.906 0.947 0.977 0.947 0.983 0.968 0.972 0.902
72. T22C1.3 T22C1.3 2305 7.602 0.918 0.965 0.959 0.965 0.982 0.971 0.900 0.942
73. ZK616.4 swsn-6 2791 7.601 0.951 0.972 0.946 0.972 0.968 0.913 0.935 0.944 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_500801]
74. C48D1.2 ced-3 4123 7.599 0.912 0.970 0.939 0.970 0.982 0.965 0.977 0.884 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
75. F59E10.1 orc-2 4698 7.599 0.942 0.976 0.961 0.976 0.984 0.948 0.930 0.882 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
76. K02F3.11 rnp-5 6205 7.598 0.955 0.976 0.963 0.976 0.922 0.963 0.903 0.940 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
77. Y65B4BR.8 psf-3 1866 7.596 0.960 0.973 0.958 0.973 0.881 0.951 0.951 0.949 PSF (yeast Partner of Sld Five) conserved replication factor, GINS complex [Source:RefSeq peptide;Acc:NP_490748]
78. F33H2.5 pole-1 3734 7.596 0.943 0.979 0.966 0.979 0.950 0.964 0.899 0.916 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
79. K01G5.4 ran-1 32379 7.595 0.934 0.967 0.957 0.967 0.937 0.955 0.929 0.949 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
80. E02H1.3 tag-124 2189 7.595 0.894 0.957 0.936 0.957 0.977 0.958 0.951 0.965 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
81. F52C9.7 mog-3 9880 7.595 0.942 0.973 0.955 0.973 0.973 0.968 0.905 0.906 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
82. F35H8.3 zfp-2 2599 7.595 0.966 0.962 0.931 0.962 0.955 0.967 0.980 0.872 Zinc Finger Protein [Source:RefSeq peptide;Acc:NP_496055]
83. F58F6.4 rfc-2 2074 7.594 0.931 0.979 0.914 0.979 0.971 0.942 0.900 0.978 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
84. T23G5.1 rnr-1 5022 7.591 0.945 0.974 0.971 0.974 0.953 0.913 0.925 0.936 Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q03604]
85. C14B1.4 wdr-5.1 4424 7.589 0.954 0.956 0.950 0.956 0.965 0.963 0.957 0.888 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
86. Y42G9A.6 wht-7 2348 7.588 0.932 0.964 0.965 0.964 0.965 0.982 0.903 0.913 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_001040881]
87. Y54E10A.4 fog-1 3560 7.588 0.956 0.957 0.946 0.957 0.935 0.969 0.951 0.917 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001021791]
88. T23H2.1 npp-12 12425 7.587 0.913 0.971 0.962 0.971 0.942 0.971 0.914 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
89. R05D11.7 snrp-27 4159 7.587 0.967 0.981 0.962 0.981 0.940 0.917 0.892 0.947 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
90. K07D4.3 rpn-11 8834 7.586 0.943 0.971 0.963 0.971 0.965 0.921 0.935 0.917 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
91. Y71G12B.9 lin-65 7476 7.586 0.906 0.944 0.943 0.944 0.969 0.974 0.940 0.966 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
92. K10B2.3 clec-88 12854 7.584 0.926 0.948 0.944 0.948 0.971 0.965 0.974 0.908 C-type lectin domain-containing protein 88 [Source:UniProtKB/Swiss-Prot;Acc:Q86NG3]
93. W08E3.1 snr-2 14849 7.584 0.878 0.934 0.920 0.934 0.982 0.966 0.986 0.984 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
94. F52E1.1 pos-1 32185 7.583 0.945 0.956 0.930 0.956 0.957 0.971 0.953 0.915 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
95. R12C12.2 ran-5 14517 7.583 0.906 0.980 0.959 0.980 0.956 0.952 0.928 0.922 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
96. T09A5.8 cec-3 5813 7.583 0.938 0.982 0.983 0.982 0.946 0.926 0.850 0.976 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
97. Y14H12B.2 Y14H12B.2 6496 7.582 0.908 0.935 0.959 0.935 0.939 0.969 0.962 0.975
98. C08B11.3 swsn-7 11608 7.582 0.972 0.975 0.984 0.975 0.951 0.937 0.904 0.884 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
99. Y39G10AR.13 icp-1 3445 7.581 0.913 0.954 0.942 0.954 0.979 0.954 0.936 0.949 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
100. Y43F4B.3 set-25 8036 7.58 0.914 0.950 0.975 0.950 0.952 0.980 0.928 0.931 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA