C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y38E10A.6

Gene ID Gene Name Reads Transcripts Annotation
Y38E10A.6 ceh-100 5505 Y38E10A.6a, Y38E10A.6b C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]

Genes with expression patterns similar to Y38E10A.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y38E10A.6 ceh-100 5505 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
2. Y71G12B.9 lin-65 7476 7.705 0.955 0.976 0.962 0.976 0.992 0.995 0.928 0.921 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
3. T26A5.5 jhdm-1 12698 7.69 0.967 0.964 0.961 0.964 0.967 0.978 0.927 0.962 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
4. F18C5.2 wrn-1 3792 7.689 0.963 0.967 0.964 0.967 0.977 0.972 0.929 0.950 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
5. Y41D4B.19 npp-8 12992 7.665 0.943 0.958 0.959 0.958 0.974 0.980 0.922 0.971 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
6. C14A4.4 crn-3 6558 7.652 0.951 0.974 0.920 0.974 0.950 0.986 0.972 0.925 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
7. C04H5.6 mog-4 4517 7.649 0.956 0.952 0.947 0.952 0.983 0.988 0.940 0.931 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
8. F52C9.7 mog-3 9880 7.648 0.932 0.943 0.973 0.943 0.983 0.984 0.931 0.959 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
9. F10E9.7 F10E9.7 1842 7.645 0.904 0.952 0.967 0.952 0.980 0.986 0.960 0.944
10. F45E12.2 brf-1 4667 7.644 0.948 0.962 0.953 0.962 0.969 0.982 0.918 0.950 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
11. B0464.2 ctr-9 7610 7.642 0.933 0.941 0.989 0.941 0.984 0.986 0.937 0.931 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
12. F56D2.6 ddx-15 12282 7.641 0.945 0.962 0.957 0.962 0.974 0.989 0.926 0.926 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
13. T28D9.2 rsp-5 6460 7.641 0.943 0.965 0.972 0.965 0.984 0.973 0.923 0.916 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
14. Y53C12B.3 nos-3 20231 7.641 0.927 0.967 0.956 0.967 0.987 0.979 0.935 0.923 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
15. C41C4.6 ulp-4 13338 7.633 0.928 0.962 0.974 0.962 0.978 0.978 0.894 0.957 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
16. F32H2.1 snpc-4 7581 7.632 0.927 0.955 0.963 0.955 0.975 0.991 0.926 0.940 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
17. ZK1251.9 dcaf-1 10926 7.628 0.937 0.949 0.947 0.949 0.984 0.974 0.962 0.926 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
18. ZK328.2 eftu-2 7040 7.627 0.941 0.962 0.951 0.962 0.964 0.971 0.955 0.921 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
19. Y56A3A.17 npp-16 5391 7.619 0.920 0.954 0.964 0.954 0.959 0.986 0.957 0.925 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
20. Y37A1B.1 lst-3 10739 7.618 0.959 0.981 0.933 0.981 0.936 0.952 0.937 0.939 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
21. F14B4.3 rpoa-2 7549 7.616 0.940 0.975 0.961 0.975 0.980 0.979 0.904 0.902 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
22. T04H1.4 rad-50 2736 7.612 0.932 0.962 0.977 0.962 0.931 0.974 0.978 0.896 DNA repair protein rad-50 [Source:UniProtKB/Swiss-Prot;Acc:O44199]
23. T23H2.1 npp-12 12425 7.609 0.932 0.943 0.953 0.943 0.974 0.989 0.938 0.937 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
24. Y18D10A.1 attf-6 6942 7.609 0.936 0.971 0.950 0.971 0.963 0.976 0.890 0.952 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
25. Y46G5A.4 snrp-200 13827 7.607 0.946 0.959 0.967 0.959 0.967 0.990 0.922 0.897 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
26. ZK1128.6 ttll-4 6059 7.606 0.919 0.968 0.956 0.968 0.988 0.975 0.929 0.903 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
27. B0035.12 sart-3 7188 7.606 0.948 0.987 0.956 0.987 0.988 0.958 0.891 0.891 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
28. Y116A8C.42 snr-1 17062 7.604 0.897 0.967 0.950 0.967 0.990 0.983 0.907 0.943 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
29. ZK973.2 cec-10 7108 7.602 0.964 0.941 0.926 0.941 0.975 0.965 0.921 0.969 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
30. Y37D8A.9 mrg-1 14369 7.597 0.939 0.963 0.949 0.963 0.983 0.987 0.909 0.904 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
31. F09F7.3 rpc-2 9751 7.595 0.903 0.948 0.935 0.948 0.985 0.982 0.920 0.974 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
32. C42D4.8 rpc-1 5000 7.594 0.943 0.973 0.931 0.973 0.937 0.970 0.929 0.938 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_501127]
33. C23G10.8 C23G10.8 4642 7.593 0.923 0.980 0.952 0.980 0.973 0.934 0.910 0.941
34. T26A8.1 T26A8.1 4387 7.593 0.938 0.944 0.933 0.944 0.970 0.980 0.954 0.930
35. R05D3.11 met-2 3364 7.59 0.932 0.955 0.968 0.955 0.952 0.972 0.934 0.922 Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
36. K07A12.2 egg-6 18331 7.589 0.920 0.947 0.941 0.947 0.971 0.981 0.937 0.945 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
37. R12C12.2 ran-5 14517 7.587 0.926 0.940 0.961 0.940 0.968 0.977 0.945 0.930 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
38. W08D2.7 mtr-4 2699 7.587 0.963 0.943 0.974 0.943 0.956 0.962 0.941 0.905 mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
39. C04G2.6 dis-3 5048 7.585 0.959 0.980 0.958 0.980 0.960 0.979 0.899 0.870 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
40. C08B11.2 hda-2 2313 7.585 0.939 0.948 0.923 0.948 0.954 0.968 0.940 0.965 Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
41. C46A5.9 hcf-1 6295 7.584 0.895 0.981 0.951 0.981 0.978 0.971 0.916 0.911 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
42. T05H4.14 gad-1 7979 7.583 0.927 0.956 0.962 0.956 0.959 0.974 0.931 0.918 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
43. ZK856.13 tftc-3 2960 7.582 0.899 0.972 0.964 0.972 0.975 0.965 0.908 0.927 Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_505626]
44. W06E11.4 sbds-1 6701 7.581 0.898 0.967 0.945 0.967 0.976 0.980 0.929 0.919 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
45. C16C10.6 ccdc-55 3581 7.581 0.959 0.950 0.951 0.950 0.960 0.950 0.932 0.929 Nuclear speckle splicing regulatory protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09252]
46. ZK1320.12 taf-8 3558 7.58 0.913 0.969 0.948 0.969 0.969 0.934 0.919 0.959 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
47. F55G1.8 plk-3 12036 7.579 0.958 0.960 0.955 0.960 0.963 0.947 0.912 0.924 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
48. F49D11.1 prp-17 5338 7.577 0.935 0.970 0.970 0.970 0.935 0.974 0.872 0.951 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
49. C25A1.4 C25A1.4 15507 7.576 0.878 0.968 0.970 0.968 0.986 0.939 0.906 0.961
50. F58E10.3 ddx-17 15107 7.574 0.931 0.975 0.953 0.975 0.961 0.971 0.887 0.921 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
51. Y23H5B.6 Y23H5B.6 5886 7.574 0.919 0.959 0.959 0.959 0.987 0.968 0.922 0.901
52. F59E10.1 orc-2 4698 7.573 0.880 0.960 0.945 0.960 0.961 0.974 0.961 0.932 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
53. B0035.3 B0035.3 4118 7.572 0.936 0.938 0.958 0.938 0.958 0.952 0.942 0.950
54. Y39G10AR.13 icp-1 3445 7.569 0.906 0.935 0.946 0.935 0.981 0.966 0.958 0.942 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
55. T07G12.6 zim-1 1330 7.568 0.898 0.954 0.966 0.954 0.981 0.968 0.921 0.926 Zinc finger In Meiosis [Source:RefSeq peptide;Acc:NP_501948]
56. ZK353.1 cyy-1 5745 7.568 0.894 0.958 0.933 0.958 0.964 0.978 0.904 0.979 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
57. T23B5.1 prmt-3 10677 7.567 0.936 0.934 0.971 0.934 0.975 0.947 0.969 0.901 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
58. F55F8.3 F55F8.3 2107 7.567 0.887 0.959 0.940 0.959 0.990 0.957 0.957 0.918 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
59. Y40B1B.6 spr-5 6252 7.564 0.922 0.953 0.965 0.953 0.981 0.963 0.911 0.916 Probable lysine-specific histone demethylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWP6]
60. F30F8.3 gras-1 5902 7.564 0.895 0.962 0.939 0.962 0.962 0.963 0.935 0.946 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
61. F59A2.1 npp-9 34375 7.564 0.958 0.941 0.929 0.941 0.988 0.983 0.901 0.923 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
62. Y17G7A.1 hmg-12 29989 7.563 0.929 0.963 0.936 0.963 0.976 0.975 0.892 0.929 HMG [Source:RefSeq peptide;Acc:NP_496544]
63. F32E10.1 nol-10 3225 7.563 0.913 0.950 0.960 0.950 0.968 0.938 0.915 0.969 NucleOLar protein [Source:RefSeq peptide;Acc:NP_501233]
64. F23F1.1 nfyc-1 9983 7.562 0.932 0.960 0.957 0.960 0.976 0.971 0.908 0.898 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
65. Y80D3A.2 emb-4 3717 7.562 0.936 0.958 0.931 0.958 0.920 0.973 0.947 0.939
66. F48E8.3 F48E8.3 4186 7.561 0.936 0.906 0.962 0.906 0.964 0.985 0.962 0.940
67. Y51H1A.4 ing-3 8617 7.56 0.940 0.939 0.948 0.939 0.973 0.944 0.930 0.947 Inhibitor of growth protein [Source:RefSeq peptide;Acc:NP_496909]
68. T22A3.5 pash-1 3240 7.558 0.919 0.948 0.961 0.948 0.939 0.980 0.924 0.939 PArtner of DroSHa (DRSH-1 interactor) [Source:RefSeq peptide;Acc:NP_001293461]
69. T25G3.4 T25G3.4 9394 7.557 0.908 0.950 0.937 0.950 0.982 0.970 0.910 0.950 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
70. C05C8.6 hpo-9 8263 7.556 0.955 0.966 0.970 0.966 0.944 0.947 0.895 0.913
71. Y41D4B.13 ced-2 10100 7.556 0.921 0.954 0.967 0.954 0.979 0.928 0.918 0.935 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
72. H20J04.2 athp-2 5149 7.556 0.911 0.968 0.969 0.968 0.932 0.985 0.911 0.912 AT Hook plus PHD finger transcription factor [Source:RefSeq peptide;Acc:NP_494767]
73. R53.2 dtmk-1 6821 7.555 0.876 0.948 0.943 0.948 0.963 0.979 0.951 0.947 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
74. F59E12.2 zyg-1 1718 7.554 0.940 0.961 0.930 0.961 0.944 0.980 0.935 0.903 Probable serine/threonine-protein kinase zyg-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GT24]
75. ZK381.1 him-3 4913 7.553 0.924 0.963 0.948 0.963 0.967 0.974 0.873 0.941 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
76. Y38A8.3 ulp-2 7403 7.553 0.940 0.954 0.956 0.954 0.956 0.984 0.923 0.886 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
77. C02F5.4 cids-1 3125 7.553 0.910 0.968 0.960 0.968 0.961 0.981 0.877 0.928 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
78. F25G6.2 symk-1 2880 7.553 0.930 0.954 0.915 0.954 0.969 0.957 0.919 0.955 SYMpleKin cleavage and polyadenylation factor [Source:RefSeq peptide;Acc:NP_505210]
79. F53F4.3 tbcb-1 6442 7.552 0.902 0.929 0.959 0.929 0.962 0.932 0.974 0.965 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
80. Y47D3A.26 smc-3 6256 7.551 0.948 0.953 0.977 0.953 0.975 0.947 0.849 0.949 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
81. F28C6.6 suf-1 3642 7.551 0.949 0.937 0.922 0.937 0.976 0.966 0.906 0.958 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
82. C16C10.4 C16C10.4 3439 7.549 0.898 0.957 0.964 0.957 0.974 0.984 0.917 0.898 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
83. C08B11.3 swsn-7 11608 7.548 0.907 0.947 0.964 0.947 0.968 0.970 0.909 0.936 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
84. T10B5.5 cct-7 24616 7.548 0.919 0.965 0.943 0.965 0.970 0.959 0.907 0.920 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
85. F33D4.5 mrpl-1 5337 7.547 0.898 0.953 0.955 0.953 0.973 0.977 0.918 0.920 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
86. C26D10.1 ran-3 11111 7.545 0.912 0.951 0.933 0.951 0.957 0.989 0.918 0.934 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
87. C25D7.8 otub-1 7941 7.541 0.891 0.970 0.969 0.970 0.965 0.918 0.916 0.942 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
88. F01F1.7 ddx-23 4217 7.539 0.930 0.944 0.910 0.944 0.977 0.993 0.954 0.887 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
89. C26E6.7 eri-9 8069 7.539 0.916 0.944 0.968 0.944 0.978 0.967 0.880 0.942 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
90. F25B3.6 rtfo-1 11965 7.538 0.903 0.954 0.953 0.954 0.961 0.966 0.933 0.914 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
91. Y39E4B.2 snpc-1.2 5800 7.536 0.918 0.982 0.955 0.982 0.982 0.968 0.882 0.867 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
92. Y65B4BL.2 deps-1 18277 7.535 0.955 0.974 0.961 0.974 0.942 0.962 0.880 0.887
93. ZK686.4 snu-23 9040 7.535 0.912 0.947 0.965 0.947 0.943 0.965 0.962 0.894 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
94. T08G5.5 vps-39 4669 7.533 0.927 0.963 0.942 0.963 0.968 0.969 0.944 0.857 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_001041163]
95. F54D5.11 F54D5.11 2756 7.532 0.879 0.964 0.962 0.964 0.966 0.937 0.911 0.949 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
96. F32E10.6 cec-5 10643 7.532 0.934 0.953 0.963 0.953 0.954 0.984 0.922 0.869 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
97. C26E6.4 rpb-2 7053 7.531 0.925 0.962 0.923 0.962 0.967 0.988 0.909 0.895 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
98. R119.4 pqn-59 16065 7.53 0.959 0.967 0.960 0.967 0.902 0.954 0.894 0.927 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
99. D2030.6 prg-1 26751 7.53 0.943 0.950 0.965 0.950 0.939 0.967 0.897 0.919 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
100. F33G12.4 lrr-1 3639 7.529 0.935 0.962 0.950 0.962 0.980 0.923 0.920 0.897 Leucine-Rich Repeat protein [Source:RefSeq peptide;Acc:NP_494928]

There are 2416 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA