C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C25A1.3

Gene ID Gene Name Reads Transcripts Annotation
C25A1.3 tag-72 1861 C25A1.3 mRNA cap guanine-N7 methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS1]

Genes with expression patterns similar to C25A1.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C25A1.3 tag-72 1861 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mRNA cap guanine-N7 methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS1]
2. Y39B6A.35 tgt-2 2364 7.606 0.924 0.966 0.928 0.966 0.955 0.978 0.985 0.904 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
3. T28D9.10 snr-3 9995 7.581 0.946 0.953 0.864 0.953 0.972 0.969 0.981 0.943 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
4. Y41D4B.19 npp-8 12992 7.574 0.881 0.955 0.909 0.955 0.968 0.963 0.977 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
5. F53A2.4 nud-1 7818 7.57 0.927 0.943 0.921 0.943 0.982 0.979 0.984 0.891 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
6. F18A1.8 pid-1 3751 7.563 0.928 0.939 0.940 0.939 0.968 0.955 0.944 0.950 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
7. C17G10.2 C17G10.2 2288 7.561 0.928 0.965 0.929 0.965 0.956 0.994 0.916 0.908
8. C34E10.2 gop-2 5684 7.561 0.910 0.960 0.909 0.960 0.967 0.970 0.978 0.907 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
9. W08E3.1 snr-2 14849 7.552 0.933 0.954 0.913 0.954 0.972 0.953 0.984 0.889 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
10. T23G11.3 gld-1 41748 7.552 0.908 0.944 0.889 0.944 0.964 0.978 0.971 0.954 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
11. W06E11.4 sbds-1 6701 7.545 0.909 0.954 0.948 0.954 0.988 0.968 0.958 0.866 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
12. M01E11.5 cey-3 20931 7.544 0.918 0.939 0.915 0.939 0.968 0.976 0.982 0.907 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
13. C06A8.4 skr-17 2589 7.543 0.909 0.952 0.955 0.952 0.964 0.970 0.917 0.924 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
14. D2023.5 mpst-1 10328 7.542 0.945 0.943 0.871 0.943 0.983 0.956 0.984 0.917 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
15. C15H11.6 nxf-2 1545 7.54 0.957 0.938 0.845 0.938 0.932 0.983 0.973 0.974 Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]
16. Y71G12B.9 lin-65 7476 7.534 0.892 0.959 0.926 0.959 0.969 0.942 0.943 0.944 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
17. T21B10.1 mrpl-50 14595 7.53 0.929 0.962 0.900 0.962 0.958 0.944 0.949 0.926 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
18. C26E6.7 eri-9 8069 7.53 0.875 0.945 0.905 0.945 0.987 0.976 0.956 0.941 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
19. Y53C12B.3 nos-3 20231 7.528 0.934 0.965 0.885 0.965 0.966 0.919 0.960 0.934 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
20. Y54H5A.2 Y54H5A.2 2168 7.527 0.927 0.953 0.892 0.953 0.956 0.984 0.985 0.877
21. C18E9.3 szy-20 6819 7.527 0.918 0.929 0.930 0.929 0.978 0.972 0.965 0.906 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
22. C06G3.2 klp-18 4885 7.522 0.888 0.954 0.894 0.954 0.967 0.937 0.971 0.957 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_501093]
23. R13A5.12 lpd-7 10476 7.521 0.923 0.949 0.863 0.949 0.948 0.973 0.968 0.948 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
24. Y116A8C.42 snr-1 17062 7.521 0.925 0.961 0.876 0.961 0.970 0.918 0.983 0.927 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
25. B0205.11 mrpl-9 9162 7.515 0.935 0.959 0.919 0.959 0.931 0.913 0.943 0.956 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
26. K08F4.2 gtbp-1 25222 7.515 0.938 0.948 0.869 0.948 0.965 0.938 0.986 0.923 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
27. F53F10.5 npp-11 3378 7.512 0.934 0.951 0.918 0.951 0.925 0.962 0.921 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
28. C26B2.6 elpc-4 3600 7.511 0.912 0.948 0.898 0.948 0.954 0.969 0.960 0.922 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
29. C41C4.6 ulp-4 13338 7.511 0.913 0.946 0.922 0.946 0.964 0.925 0.942 0.953 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
30. R09B3.1 exo-3 4401 7.51 0.940 0.944 0.886 0.944 0.944 0.960 0.976 0.916 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
31. Y49E10.15 snr-6 8505 7.508 0.925 0.930 0.881 0.930 0.976 0.948 0.985 0.933 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
32. F43G9.5 cfim-1 9169 7.508 0.907 0.939 0.895 0.939 0.981 0.959 0.971 0.917 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
33. C27H6.3 tofu-1 2992 7.507 0.912 0.932 0.908 0.932 0.966 0.955 0.973 0.929 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
34. B0414.5 cpb-3 11584 7.507 0.928 0.925 0.875 0.925 0.977 0.984 0.968 0.925 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
35. Y37D8A.11 cec-7 8801 7.506 0.901 0.963 0.891 0.963 0.957 0.937 0.968 0.926 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
36. Y40G12A.1 ubh-3 4142 7.505 0.939 0.947 0.924 0.947 0.951 0.968 0.965 0.864 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
37. C25A1.4 C25A1.4 15507 7.502 0.890 0.943 0.890 0.943 0.981 0.963 0.957 0.935
38. F59A2.1 npp-9 34375 7.501 0.904 0.929 0.906 0.929 0.960 0.969 0.985 0.919 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
39. Y55F3AM.12 dcap-1 8679 7.5 0.891 0.944 0.914 0.944 0.984 0.932 0.958 0.933 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
40. F41H10.10 htp-1 6425 7.499 0.929 0.936 0.887 0.936 0.958 0.973 0.968 0.912 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
41. F41G3.14 exos-8 2300 7.498 0.913 0.963 0.889 0.963 0.967 0.952 0.969 0.882 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
42. Y54E5A.6 Y54E5A.6 770 7.498 0.915 0.960 0.902 0.960 0.963 0.954 0.951 0.893
43. H20J04.8 mog-2 3084 7.497 0.920 0.941 0.936 0.941 0.946 0.945 0.965 0.903 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
44. T28D9.2 rsp-5 6460 7.497 0.900 0.948 0.896 0.948 0.973 0.970 0.951 0.911 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
45. ZK616.5 ZK616.5 10527 7.496 0.885 0.957 0.919 0.957 0.914 0.977 0.967 0.920
46. Y56A3A.19 Y56A3A.19 9680 7.496 0.939 0.915 0.926 0.915 0.964 0.966 0.977 0.894 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
47. R07E5.14 rnp-4 11659 7.495 0.927 0.926 0.898 0.926 0.981 0.939 0.973 0.925 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
48. F14D2.13 bath-28 1965 7.494 0.856 0.952 0.893 0.952 0.975 0.952 0.968 0.946 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_871999]
49. T25G3.4 T25G3.4 9394 7.493 0.932 0.934 0.890 0.934 0.959 0.939 0.968 0.937 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
50. F52F12.4 lsl-1 4055 7.491 0.836 0.950 0.929 0.950 0.958 0.953 0.973 0.942 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
51. Y14H12B.2 Y14H12B.2 6496 7.488 0.897 0.952 0.904 0.952 0.953 0.975 0.973 0.882
52. F23F1.1 nfyc-1 9983 7.486 0.921 0.960 0.924 0.960 0.970 0.932 0.907 0.912 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
53. C07H6.5 cgh-1 60576 7.485 0.873 0.925 0.897 0.925 0.970 0.969 0.986 0.940 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
54. C07E3.2 pro-2 4193 7.483 0.861 0.950 0.915 0.950 0.942 0.948 0.958 0.959 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
55. T21B10.7 cct-2 13999 7.483 0.935 0.948 0.886 0.948 0.961 0.955 0.950 0.900 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
56. Y39G10AR.7 ekl-7 7072 7.482 0.930 0.942 0.920 0.942 0.920 0.945 0.952 0.931
57. F21F3.6 F21F3.6 57056 7.481 0.920 0.929 0.911 0.929 0.964 0.966 0.964 0.898
58. F58B3.5 mars-1 6729 7.48 0.930 0.936 0.904 0.936 0.975 0.937 0.955 0.907 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
59. Y62E10A.11 mdt-9 5971 7.479 0.941 0.957 0.934 0.957 0.956 0.936 0.953 0.845 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
60. H43I07.2 rpac-40 3342 7.479 0.876 0.936 0.937 0.936 0.936 0.984 0.963 0.911 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
61. C46A5.9 hcf-1 6295 7.478 0.890 0.935 0.871 0.935 0.974 0.957 0.943 0.973 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
62. B0024.13 B0024.13 4311 7.478 0.912 0.923 0.883 0.923 0.937 0.972 0.971 0.957 Polyprenol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17428]
63. B0205.9 B0205.9 3651 7.477 0.921 0.943 0.871 0.943 0.945 0.960 0.970 0.924
64. T22C1.3 T22C1.3 2305 7.477 0.903 0.934 0.912 0.934 0.983 0.964 0.920 0.927
65. T23H2.1 npp-12 12425 7.475 0.921 0.958 0.918 0.958 0.932 0.937 0.918 0.933 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
66. T07D4.4 ddx-19 7234 7.475 0.922 0.934 0.891 0.934 0.966 0.964 0.938 0.926 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
67. F26H9.1 prom-1 6444 7.471 0.927 0.924 0.896 0.924 0.962 0.967 0.946 0.925 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
68. C48B4.7 C48B4.7 4006 7.471 0.914 0.913 0.912 0.913 0.991 0.948 0.976 0.904
69. T05H4.11 T05H4.11 12835 7.469 0.944 0.922 0.887 0.922 0.936 0.970 0.975 0.913
70. Y41D4B.12 set-23 2590 7.468 0.947 0.926 0.927 0.926 0.969 0.974 0.880 0.919 Probable histone-lysine N-methyltransferase set-23 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y12]
71. F29C4.6 tut-1 5637 7.467 0.912 0.960 0.901 0.960 0.951 0.956 0.882 0.945 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
72. F26F4.11 rpb-8 7601 7.466 0.916 0.949 0.892 0.949 0.960 0.956 0.950 0.894 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
73. C05C8.5 C05C8.5 2655 7.465 0.925 0.921 0.915 0.921 0.962 0.975 0.945 0.901
74. Y50D7A.9 taco-1 5949 7.465 0.946 0.946 0.849 0.946 0.946 0.944 0.977 0.911 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
75. C36B1.5 prp-4 2714 7.465 0.923 0.957 0.903 0.957 0.920 0.970 0.891 0.944 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
76. C30H7.2 C30H7.2 14364 7.464 0.855 0.913 0.936 0.913 0.950 0.950 0.966 0.981
77. C06A1.5 rpb-6 7515 7.463 0.908 0.948 0.920 0.948 0.977 0.933 0.960 0.869 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
78. ZC410.2 mppb-1 3991 7.463 0.896 0.940 0.897 0.940 0.966 0.925 0.974 0.925 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
79. C01F6.8 icln-1 6586 7.461 0.938 0.955 0.851 0.955 0.968 0.948 0.974 0.872 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
80. F48E8.3 F48E8.3 4186 7.461 0.909 0.927 0.882 0.927 0.974 0.956 0.930 0.956
81. C14A4.14 mrps-22 7966 7.459 0.910 0.943 0.892 0.943 0.939 0.976 0.940 0.916 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
82. F08G5.1 dsb-1 2436 7.459 0.917 0.909 0.893 0.909 0.964 0.971 0.953 0.943 Double-Strand Break factor [Source:RefSeq peptide;Acc:NP_001255642]
83. Y73B6BL.2 htp-2 5257 7.458 0.941 0.951 0.904 0.951 0.957 0.916 0.943 0.895 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500981]
84. F46F11.2 cey-2 47143 7.455 0.881 0.929 0.907 0.929 0.949 0.972 0.962 0.926 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
85. Y37E3.3 rpb-10 4051 7.453 0.947 0.943 0.859 0.943 0.965 0.930 0.964 0.902 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
86. Y71F9B.4 snr-7 13542 7.451 0.935 0.929 0.881 0.929 0.979 0.950 0.961 0.887 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
87. C17H12.13 anat-1 12995 7.45 0.916 0.953 0.917 0.953 0.973 0.940 0.950 0.848 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
88. Y113G7B.5 fog-2 2753 7.449 0.908 0.919 0.888 0.919 0.963 0.957 0.939 0.956 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
89. T03D8.2 mrps-12 8253 7.449 0.892 0.930 0.905 0.930 0.958 0.925 0.966 0.943 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
90. T24D1.5 har-2 2882 7.448 0.879 0.923 0.873 0.923 0.971 0.970 0.944 0.965
91. F21C3.4 rde-2 6286 7.447 0.932 0.937 0.905 0.937 0.953 0.954 0.950 0.879
92. T14B4.2 T14B4.2 4487 7.447 0.880 0.958 0.916 0.958 0.967 0.981 0.920 0.867
93. Y73B6BL.32 lsm-8 11002 7.446 0.937 0.945 0.916 0.945 0.964 0.899 0.958 0.882 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
94. C43E11.10 cdc-6 5331 7.446 0.915 0.946 0.934 0.946 0.925 0.907 0.978 0.895 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
95. Y57A10A.25 parn-2 2634 7.446 0.900 0.949 0.904 0.949 0.978 0.963 0.960 0.843 PARN (Poly(A)-specific RiboNuclease) homolog [Source:RefSeq peptide;Acc:NP_496602]
96. K01G5.1 rnf-113 4336 7.445 0.919 0.954 0.880 0.954 0.950 0.937 0.937 0.914 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
97. F58A4.4 pri-1 1493 7.444 0.877 0.933 0.905 0.933 0.976 0.967 0.929 0.924 DNA primase small subunit [Source:UniProtKB/Swiss-Prot;Acc:P34471]
98. Y47D3A.26 smc-3 6256 7.444 0.839 0.948 0.907 0.948 0.972 0.969 0.965 0.896 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
99. Y45G5AM.8 coh-4 2525 7.444 0.900 0.943 0.918 0.943 0.963 0.958 0.950 0.869 COHesin family [Source:RefSeq peptide;Acc:NP_504161]
100. Y18D10A.16 Y18D10A.16 2881 7.443 0.911 0.930 0.851 0.930 0.953 0.970 0.939 0.959

There are 1159 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA