C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for B0001.7

Gene ID Gene Name Reads Transcripts Annotation
B0001.7 B0001.7 1590 B0001.7a, B0001.7b, B0001.7c

Genes with expression patterns similar to B0001.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0001.7 B0001.7 1590 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. F41E6.4 smk-1 22394 7.495 0.926 0.968 0.948 0.968 0.975 0.936 0.826 0.948 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
3. Y54E10A.9 vbh-1 28746 7.494 0.893 0.948 0.943 0.948 0.985 0.963 0.857 0.957 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
4. D1081.9 D1081.9 3792 7.48 0.906 0.967 0.946 0.967 0.974 0.969 0.842 0.909
5. K01C8.10 cct-4 15077 7.478 0.935 0.927 0.948 0.927 0.958 0.961 0.863 0.959 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
6. C43E11.1 acin-1 7781 7.476 0.900 0.937 0.949 0.937 0.976 0.984 0.868 0.925 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
7. B0025.2 csn-2 5205 7.471 0.904 0.953 0.956 0.953 0.954 0.964 0.839 0.948 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
8. T05F1.6 hsr-9 13312 7.47 0.884 0.953 0.931 0.953 0.977 0.976 0.846 0.950
9. F22D6.3 nars-1 18624 7.462 0.896 0.932 0.961 0.932 0.968 0.932 0.881 0.960 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
10. R13F6.10 cra-1 11610 7.455 0.942 0.941 0.963 0.941 0.963 0.965 0.803 0.937 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
11. C06E7.1 sams-3 26921 7.454 0.929 0.924 0.953 0.924 0.967 0.984 0.826 0.947 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
12. C36B1.8 gls-1 8617 7.454 0.879 0.971 0.911 0.971 0.978 0.961 0.844 0.939 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
13. F28B3.7 him-1 18274 7.454 0.923 0.942 0.941 0.942 0.970 0.957 0.870 0.909 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
14. F25B3.1 ehbp-1 6409 7.451 0.864 0.965 0.932 0.965 0.957 0.931 0.888 0.949 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
15. C53D5.6 imb-3 28921 7.449 0.906 0.931 0.936 0.931 0.974 0.985 0.834 0.952 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
16. T23G11.7 T23G11.7 10001 7.449 0.869 0.965 0.930 0.965 0.962 0.972 0.872 0.914
17. F56D2.6 ddx-15 12282 7.448 0.949 0.947 0.936 0.947 0.938 0.952 0.832 0.947 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
18. T10F2.1 gars-1 7204 7.448 0.928 0.922 0.978 0.922 0.973 0.964 0.828 0.933 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
19. T05C3.5 dnj-19 20420 7.446 0.945 0.925 0.949 0.925 0.962 0.960 0.870 0.910 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
20. W09C5.7 W09C5.7 2359 7.444 0.889 0.925 0.949 0.925 0.969 0.972 0.855 0.960
21. F18E2.3 scc-3 13464 7.438 0.893 0.949 0.945 0.949 0.971 0.970 0.847 0.914 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
22. Y47G6A.20 rnp-6 5542 7.433 0.849 0.970 0.921 0.970 0.956 0.953 0.836 0.978 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
23. F37E3.1 ncbp-1 5649 7.433 0.889 0.938 0.921 0.938 0.954 0.978 0.873 0.942 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
24. Y110A7A.13 chp-1 6714 7.431 0.882 0.953 0.892 0.953 0.951 0.970 0.874 0.956 CHORD Protein [Source:RefSeq peptide;Acc:NP_491519]
25. ZK381.4 pgl-1 20651 7.428 0.918 0.938 0.949 0.938 0.949 0.964 0.821 0.951 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
26. Y46G5A.4 snrp-200 13827 7.427 0.906 0.954 0.947 0.954 0.937 0.963 0.815 0.951 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
27. F36A4.7 ama-1 13620 7.425 0.942 0.909 0.948 0.909 0.968 0.960 0.826 0.963 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
28. Y34D9A.1 mrpl-38 5291 7.422 0.889 0.957 0.932 0.957 0.956 0.948 0.851 0.932 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
29. B0464.1 dars-1 12331 7.421 0.885 0.923 0.957 0.923 0.970 0.952 0.874 0.937 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
30. Y48G8AL.6 smg-2 12561 7.419 0.924 0.932 0.914 0.932 0.974 0.962 0.815 0.966 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
31. F42A6.7 hrp-1 28201 7.419 0.878 0.944 0.935 0.944 0.954 0.969 0.822 0.973 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
32. F56B3.12 skr-18 6534 7.417 0.871 0.938 0.930 0.938 0.967 0.960 0.855 0.958 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
33. K10D2.3 cid-1 7175 7.417 0.907 0.936 0.952 0.936 0.978 0.956 0.833 0.919 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
34. C17E4.10 C17E4.10 7034 7.416 0.869 0.944 0.920 0.944 0.983 0.963 0.872 0.921
35. F26F4.10 rars-1 9971 7.416 0.901 0.907 0.963 0.907 0.974 0.948 0.841 0.975 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
36. F56D1.7 daz-1 23684 7.415 0.929 0.930 0.945 0.930 0.974 0.981 0.803 0.923 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
37. F20D12.1 csr-1 16351 7.414 0.929 0.912 0.959 0.912 0.981 0.953 0.825 0.943 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
38. F46A9.4 skr-2 16831 7.412 0.894 0.913 0.962 0.913 0.974 0.974 0.837 0.945 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
39. F39B2.10 dnj-12 35162 7.41 0.890 0.935 0.938 0.935 0.969 0.951 0.843 0.949 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
40. F45H11.2 ned-8 13247 7.41 0.840 0.929 0.920 0.929 0.979 0.968 0.863 0.982 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
41. F44A2.1 tag-153 16535 7.41 0.907 0.956 0.937 0.956 0.973 0.949 0.814 0.918
42. T22D1.10 ruvb-2 6505 7.41 0.924 0.915 0.949 0.915 0.938 0.967 0.866 0.936 RuvB-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH2]
43. F36F2.3 rbpl-1 15376 7.409 0.909 0.930 0.937 0.930 0.971 0.964 0.800 0.968 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
44. T01G9.4 npp-2 5361 7.409 0.889 0.961 0.907 0.961 0.984 0.972 0.782 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
45. Y67D8C.5 eel-1 30623 7.406 0.937 0.918 0.957 0.918 0.972 0.902 0.842 0.960 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
46. Y102A5A.1 cand-1 11808 7.405 0.864 0.952 0.942 0.952 0.970 0.927 0.822 0.976 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
47. F48E8.6 disl-2 8774 7.403 0.930 0.935 0.925 0.935 0.967 0.941 0.819 0.951 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
48. R119.4 pqn-59 16065 7.403 0.906 0.940 0.898 0.940 0.974 0.974 0.829 0.942 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
49. B0464.2 ctr-9 7610 7.402 0.908 0.945 0.933 0.945 0.910 0.964 0.876 0.921 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
50. F32E10.6 cec-5 10643 7.399 0.876 0.933 0.943 0.933 0.965 0.967 0.841 0.941 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
51. R07G3.5 pgam-5 11646 7.397 0.840 0.968 0.942 0.968 0.959 0.941 0.842 0.937 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
52. T12D8.8 hip-1 18283 7.396 0.840 0.935 0.951 0.935 0.969 0.951 0.834 0.981 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
53. T06D8.6 cchl-1 26292 7.396 0.892 0.947 0.943 0.947 0.967 0.929 0.809 0.962 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
54. Y61A9LA.8 sut-2 11388 7.395 0.903 0.936 0.917 0.936 0.971 0.965 0.805 0.962 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
55. F01G4.3 skih-2 3353 7.394 0.908 0.958 0.932 0.958 0.954 0.979 0.780 0.925 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
56. C50C3.6 prp-8 19582 7.394 0.937 0.916 0.945 0.916 0.975 0.942 0.801 0.962 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
57. K08E3.8 mdt-29 4678 7.394 0.908 0.944 0.924 0.944 0.976 0.958 0.832 0.908 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
58. Y81G3A.3 gcn-2 5831 7.393 0.885 0.963 0.904 0.963 0.957 0.951 0.805 0.965 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
59. T20G5.11 rde-4 3966 7.392 0.884 0.926 0.933 0.926 0.968 0.962 0.873 0.920 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
60. C18G1.5 hil-4 21692 7.392 0.841 0.954 0.898 0.954 0.959 0.979 0.857 0.950 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
61. F19B6.2 ufd-1 15357 7.391 0.886 0.939 0.949 0.939 0.961 0.935 0.844 0.938 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
62. F10G8.3 rae-1 7542 7.39 0.891 0.926 0.949 0.926 0.971 0.960 0.832 0.935 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
63. F28B3.8 imb-1 7515 7.39 0.905 0.954 0.947 0.954 0.910 0.957 0.834 0.929 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
64. T05H4.6 erfa-1 12542 7.39 0.863 0.940 0.939 0.940 0.975 0.914 0.853 0.966 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
65. ZC395.8 ztf-8 5521 7.39 0.843 0.955 0.935 0.955 0.967 0.962 0.840 0.933 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
66. F32H2.1 snpc-4 7581 7.389 0.907 0.954 0.924 0.954 0.930 0.938 0.852 0.930 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
67. Y116A8C.35 uaf-2 13808 7.388 0.863 0.937 0.938 0.937 0.976 0.955 0.810 0.972 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
68. CD4.4 vps-37 4265 7.387 0.841 0.962 0.909 0.962 0.979 0.956 0.809 0.969 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_504474]
69. C28H8.4 C28H8.4 16252 7.385 0.921 0.933 0.928 0.933 0.958 0.940 0.826 0.946 Putative ER lumen protein-retaining receptor C28H8.4 [Source:UniProtKB/Swiss-Prot;Acc:Q09473]
70. Y113G7B.23 swsn-1 13766 7.384 0.893 0.928 0.920 0.928 0.979 0.925 0.831 0.980 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
71. C34E10.5 prmt-5 12277 7.384 0.903 0.924 0.961 0.924 0.957 0.958 0.824 0.933 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
72. Y53C12B.3 nos-3 20231 7.384 0.942 0.947 0.951 0.947 0.893 0.944 0.825 0.935 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
73. F08F8.3 kap-1 31437 7.382 0.906 0.963 0.935 0.963 0.964 0.879 0.820 0.952 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
74. T12D8.2 drr-2 16208 7.381 0.868 0.921 0.958 0.921 0.955 0.964 0.834 0.960 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
75. D2089.1 rsp-7 11057 7.381 0.880 0.946 0.954 0.946 0.976 0.948 0.777 0.954 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
76. T19B4.2 npp-7 13073 7.38 0.869 0.953 0.936 0.953 0.961 0.919 0.823 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
77. Y105E8A.17 ekl-4 4732 7.38 0.832 0.972 0.904 0.972 0.956 0.981 0.814 0.949
78. Y39G10AR.7 ekl-7 7072 7.379 0.931 0.950 0.921 0.950 0.946 0.927 0.828 0.926
79. EEED8.5 mog-5 4698 7.377 0.910 0.932 0.961 0.932 0.971 0.967 0.818 0.886 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
80. T06A10.4 lsy-13 7631 7.375 0.891 0.951 0.961 0.951 0.962 0.909 0.821 0.929
81. Y55B1AR.2 Y55B1AR.2 4511 7.375 0.852 0.965 0.926 0.965 0.968 0.941 0.838 0.920
82. R144.7 larp-1 24669 7.374 0.922 0.897 0.949 0.897 0.946 0.978 0.820 0.965 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
83. T01G1.3 sec-31 10504 7.374 0.912 0.941 0.932 0.941 0.988 0.947 0.766 0.947 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
84. T08B2.9 fars-1 12650 7.373 0.890 0.943 0.944 0.943 0.919 0.918 0.860 0.956 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
85. E01A2.4 let-504 9788 7.373 0.918 0.946 0.920 0.946 0.954 0.986 0.776 0.927
86. Y73B6BL.18 smg-3 2772 7.372 0.933 0.907 0.946 0.907 0.942 0.962 0.836 0.939 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_500974]
87. Y39G10AR.9 Y39G10AR.9 3972 7.372 0.881 0.949 0.927 0.949 0.966 0.921 0.812 0.967
88. Y40B1B.5 eif-3.J 15061 7.37 0.894 0.915 0.951 0.915 0.977 0.928 0.829 0.961 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
89. Y73B6BL.6 sqd-1 41708 7.368 0.908 0.949 0.928 0.949 0.977 0.888 0.825 0.944 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
90. K03B4.2 K03B4.2 21796 7.367 0.876 0.954 0.927 0.954 0.947 0.908 0.863 0.938
91. F45H11.3 hpo-35 8299 7.367 0.908 0.911 0.962 0.911 0.954 0.975 0.872 0.874
92. C14A4.4 crn-3 6558 7.366 0.939 0.938 0.936 0.938 0.880 0.952 0.846 0.937 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
93. C07G1.4 wsp-1 11226 7.365 0.921 0.936 0.921 0.936 0.951 0.936 0.841 0.923 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
94. M106.1 mix-1 7950 7.364 0.876 0.952 0.927 0.952 0.964 0.987 0.777 0.929 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
95. T04A8.14 emb-5 11746 7.362 0.878 0.954 0.932 0.954 0.975 0.937 0.806 0.926 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
96. C47D12.6 tars-1 23488 7.362 0.871 0.924 0.923 0.924 0.976 0.935 0.831 0.978 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
97. C08B11.5 sap-49 10553 7.361 0.873 0.953 0.935 0.953 0.964 0.933 0.821 0.929 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
98. T05E8.3 let-355 8169 7.359 0.897 0.924 0.942 0.924 0.953 0.973 0.825 0.921
99. Y65B4BR.5 icd-2 58321 7.359 0.883 0.893 0.954 0.893 0.951 0.963 0.852 0.970 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
100. K11D12.2 pqn-51 15951 7.359 0.872 0.966 0.935 0.966 0.956 0.936 0.798 0.930 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]

There are 1640 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA