C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T25D3.2

Gene ID Gene Name Reads Transcripts Annotation
T25D3.2 mrpl-28 4649 T25D3.2 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]

Genes with expression patterns similar to T25D3.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T25D3.2 mrpl-28 4649 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]
2. F22D6.3 nars-1 18624 7.719 0.948 0.975 0.971 0.975 0.979 0.947 0.966 0.958 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
3. T12D8.2 drr-2 16208 7.712 0.953 0.964 0.979 0.964 0.972 0.940 0.966 0.974 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
4. C26D10.2 hel-1 28697 7.707 0.960 0.967 0.966 0.967 0.968 0.949 0.973 0.957 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
5. T17E9.2 nmt-1 8017 7.69 0.939 0.973 0.974 0.973 0.967 0.978 0.932 0.954 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
6. C08B11.5 sap-49 10553 7.689 0.960 0.952 0.977 0.952 0.980 0.971 0.968 0.929 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
7. C50C3.6 prp-8 19582 7.689 0.972 0.968 0.974 0.968 0.964 0.955 0.936 0.952 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
8. T01E8.6 mrps-14 9328 7.675 0.954 0.968 0.967 0.968 0.963 0.954 0.955 0.946 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
9. F46A9.4 skr-2 16831 7.674 0.967 0.958 0.977 0.958 0.969 0.923 0.954 0.968 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
10. T10F2.4 prp-19 11298 7.673 0.952 0.968 0.984 0.968 0.974 0.928 0.942 0.957 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
11. T23B12.3 mrps-2 5434 7.673 0.938 0.968 0.968 0.968 0.963 0.946 0.950 0.972 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
12. ZK616.6 perm-3 16186 7.672 0.960 0.956 0.975 0.956 0.959 0.955 0.962 0.949 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
13. F23F1.1 nfyc-1 9983 7.671 0.956 0.956 0.975 0.956 0.949 0.950 0.977 0.952 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
14. K08F11.3 cif-1 10218 7.668 0.969 0.960 0.957 0.960 0.985 0.927 0.972 0.938 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
15. T02G5.9 kars-1 9763 7.665 0.946 0.966 0.947 0.966 0.960 0.940 0.962 0.978 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
16. C34E10.5 prmt-5 12277 7.658 0.956 0.971 0.986 0.971 0.939 0.930 0.966 0.939 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
17. D2013.7 eif-3.F 21004 7.658 0.964 0.957 0.964 0.957 0.983 0.937 0.961 0.935 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
18. C18D11.4 rsp-8 18308 7.653 0.958 0.973 0.971 0.973 0.964 0.935 0.941 0.938 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
19. C33H5.12 rsp-6 23342 7.653 0.933 0.951 0.978 0.951 0.977 0.952 0.952 0.959 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
20. T19B4.2 npp-7 13073 7.645 0.968 0.945 0.974 0.945 0.949 0.945 0.970 0.949 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
21. F36A4.7 ama-1 13620 7.644 0.950 0.974 0.988 0.974 0.971 0.915 0.922 0.950 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
22. W01G7.3 rpb-11 7826 7.644 0.927 0.955 0.965 0.955 0.966 0.967 0.956 0.953 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
23. T16G1.11 eif-3.K 14014 7.643 0.955 0.961 0.967 0.961 0.959 0.939 0.957 0.944 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
24. T08B2.9 fars-1 12650 7.643 0.963 0.957 0.973 0.957 0.976 0.944 0.973 0.900 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
25. T23D8.4 eif-3.C 15343 7.64 0.951 0.968 0.963 0.968 0.949 0.959 0.915 0.967 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
26. ZK856.12 hpo-40 7855 7.639 0.942 0.940 0.979 0.940 0.967 0.959 0.963 0.949
27. C53D5.6 imb-3 28921 7.638 0.949 0.973 0.986 0.973 0.970 0.881 0.946 0.960 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
28. Y40B1B.5 eif-3.J 15061 7.636 0.964 0.956 0.978 0.956 0.965 0.916 0.971 0.930 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
29. F57B9.5 byn-1 58236 7.634 0.967 0.962 0.929 0.962 0.972 0.942 0.956 0.944 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
30. F58D5.1 hrp-2 17211 7.633 0.949 0.979 0.977 0.979 0.958 0.906 0.943 0.942 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
31. Y39G10AR.9 Y39G10AR.9 3972 7.632 0.979 0.928 0.964 0.928 0.968 0.949 0.965 0.951
32. Y71D11A.2 smr-1 4976 7.632 0.929 0.946 0.968 0.946 0.974 0.979 0.921 0.969 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
33. F26A3.1 F26A3.1 5671 7.631 0.942 0.941 0.963 0.941 0.973 0.953 0.956 0.962
34. C48B4.11 C48B4.11 4384 7.628 0.977 0.947 0.955 0.947 0.949 0.939 0.944 0.970
35. C18E9.6 tomm-40 13426 7.627 0.930 0.948 0.955 0.948 0.962 0.968 0.961 0.955 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
36. F42A6.7 hrp-1 28201 7.627 0.954 0.940 0.988 0.940 0.979 0.907 0.963 0.956 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
37. C26E6.4 rpb-2 7053 7.626 0.949 0.968 0.970 0.968 0.948 0.934 0.930 0.959 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
38. C06E7.1 sams-3 26921 7.626 0.961 0.957 0.970 0.957 0.978 0.902 0.940 0.961 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
39. W02B12.3 rsp-1 9235 7.626 0.958 0.954 0.981 0.954 0.962 0.947 0.935 0.935 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
40. C15H11.4 dhs-22 21674 7.626 0.964 0.970 0.984 0.970 0.967 0.917 0.946 0.908 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
41. K01G5.4 ran-1 32379 7.623 0.941 0.957 0.960 0.957 0.969 0.917 0.969 0.953 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
42. T20H4.3 pars-1 8167 7.622 0.969 0.964 0.961 0.964 0.960 0.909 0.965 0.930 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
43. Y111B2A.18 rsp-3 43731 7.62 0.953 0.939 0.960 0.939 0.979 0.930 0.976 0.944 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
44. Y66D12A.22 tin-10 6041 7.619 0.944 0.950 0.930 0.950 0.959 0.944 0.980 0.962 Mitochondrial import inner membrane translocase subunit Tim10 [Source:UniProtKB/Swiss-Prot;Acc:Q9Y0V6]
45. F26F4.10 rars-1 9971 7.618 0.960 0.955 0.974 0.955 0.977 0.929 0.955 0.913 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
46. C06A1.5 rpb-6 7515 7.618 0.962 0.966 0.964 0.966 0.937 0.946 0.961 0.916 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
47. Y110A7A.8 prp-31 4436 7.616 0.944 0.956 0.951 0.956 0.982 0.933 0.951 0.943 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
48. F13G3.4 dylt-1 21345 7.615 0.961 0.962 0.982 0.962 0.952 0.918 0.931 0.947 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
49. T05H4.6 erfa-1 12542 7.614 0.947 0.960 0.966 0.960 0.944 0.965 0.953 0.919 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
50. F56D1.7 daz-1 23684 7.614 0.966 0.962 0.975 0.962 0.947 0.892 0.946 0.964 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
51. T09A5.7 T09A5.7 5907 7.614 0.932 0.946 0.932 0.946 0.979 0.982 0.926 0.971
52. K02F3.11 rnp-5 6205 7.614 0.925 0.942 0.976 0.942 0.968 0.959 0.956 0.946 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
53. Y65B4BL.2 deps-1 18277 7.611 0.936 0.960 0.968 0.960 0.967 0.946 0.935 0.939
54. ZK652.1 snr-5 5993 7.611 0.938 0.961 0.956 0.961 0.973 0.960 0.900 0.962 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
55. Y34D9A.1 mrpl-38 5291 7.61 0.940 0.948 0.975 0.948 0.978 0.959 0.955 0.907 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
56. Y54E5A.4 npp-4 6288 7.61 0.972 0.948 0.970 0.948 0.948 0.952 0.933 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
57. T27F2.1 skp-1 3532 7.61 0.927 0.963 0.966 0.963 0.958 0.961 0.938 0.934 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
58. T06A10.4 lsy-13 7631 7.609 0.954 0.931 0.969 0.931 0.966 0.970 0.958 0.930
59. Y17G7A.1 hmg-12 29989 7.607 0.962 0.964 0.970 0.964 0.919 0.939 0.970 0.919 HMG [Source:RefSeq peptide;Acc:NP_496544]
60. F22B5.9 fars-3 7209 7.605 0.960 0.941 0.955 0.941 0.970 0.945 0.968 0.925 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
61. T07C4.10 T07C4.10 1563 7.605 0.956 0.953 0.973 0.953 0.948 0.952 0.938 0.932
62. C15F1.4 ppp-1 1774 7.604 0.964 0.954 0.932 0.954 0.976 0.950 0.946 0.928 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
63. DY3.1 tin-13 5225 7.604 0.972 0.940 0.938 0.940 0.978 0.914 0.972 0.950 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
64. Y39G10AR.7 ekl-7 7072 7.604 0.963 0.930 0.964 0.930 0.974 0.941 0.954 0.948
65. Y65B4BR.5 icd-2 58321 7.604 0.938 0.953 0.960 0.953 0.971 0.933 0.948 0.948 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
66. ZK381.4 pgl-1 20651 7.603 0.949 0.959 0.966 0.959 0.953 0.916 0.947 0.954 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
67. T14B4.3 T14B4.3 2875 7.602 0.918 0.923 0.976 0.923 0.975 0.958 0.965 0.964
68. T21C9.12 scpl-4 14723 7.6 0.924 0.972 0.954 0.972 0.970 0.940 0.946 0.922 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
69. Y48G8AL.6 smg-2 12561 7.599 0.967 0.959 0.967 0.959 0.946 0.917 0.938 0.946 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
70. K07A12.7 mrps-15 6325 7.598 0.937 0.956 0.926 0.956 0.973 0.905 0.980 0.965 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
71. Y110A7A.19 let-630 3830 7.597 0.954 0.950 0.967 0.950 0.978 0.935 0.928 0.935
72. B0511.10 eif-3.E 10041 7.593 0.953 0.969 0.942 0.969 0.968 0.929 0.950 0.913 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
73. Y46G5A.4 snrp-200 13827 7.593 0.927 0.950 0.986 0.950 0.962 0.905 0.959 0.954 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
74. C27B7.1 spr-2 14958 7.592 0.938 0.948 0.972 0.948 0.962 0.959 0.937 0.928 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
75. C47B2.9 C47B2.9 4096 7.592 0.968 0.941 0.956 0.941 0.981 0.963 0.898 0.944
76. F56B3.12 skr-18 6534 7.592 0.955 0.927 0.951 0.927 0.963 0.941 0.974 0.954 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
77. C05D11.10 mrps-17 4613 7.592 0.930 0.947 0.946 0.947 0.963 0.967 0.941 0.951 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
78. ZC434.5 ears-1 4725 7.592 0.942 0.956 0.954 0.956 0.962 0.922 0.938 0.962 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
79. T12D8.8 hip-1 18283 7.591 0.921 0.954 0.962 0.954 0.974 0.916 0.958 0.952 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
80. C41D11.2 eif-3.H 7520 7.591 0.945 0.952 0.956 0.952 0.953 0.931 0.961 0.941 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
81. F56F3.1 ifet-1 25772 7.591 0.945 0.945 0.977 0.945 0.940 0.964 0.938 0.937 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
82. T10C6.4 srx-44 8454 7.59 0.943 0.949 0.969 0.949 0.966 0.953 0.933 0.928 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
83. K03B4.2 K03B4.2 21796 7.59 0.959 0.933 0.956 0.933 0.931 0.985 0.962 0.931
84. D2030.6 prg-1 26751 7.59 0.954 0.941 0.981 0.941 0.944 0.940 0.964 0.925 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
85. R13F6.10 cra-1 11610 7.587 0.938 0.947 0.959 0.947 0.968 0.921 0.946 0.961 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
86. Y37D8A.11 cec-7 8801 7.586 0.961 0.962 0.979 0.962 0.929 0.900 0.942 0.951 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
87. T28D9.2 rsp-5 6460 7.585 0.964 0.955 0.975 0.955 0.913 0.923 0.954 0.946 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
88. F32H2.4 thoc-3 3861 7.584 0.912 0.941 0.975 0.941 0.976 0.971 0.939 0.929 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
89. F58E10.3 ddx-17 15107 7.584 0.962 0.960 0.985 0.960 0.944 0.914 0.913 0.946 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
90. C48E7.3 lpd-2 10330 7.584 0.953 0.956 0.977 0.956 0.927 0.923 0.941 0.951 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
91. ZK1127.4 ZK1127.4 3088 7.583 0.925 0.932 0.969 0.932 0.961 0.943 0.970 0.951 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
92. Y73B6BL.32 lsm-8 11002 7.582 0.962 0.972 0.982 0.972 0.926 0.947 0.908 0.913 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
93. F28H1.3 aars-2 13537 7.581 0.952 0.955 0.975 0.955 0.963 0.940 0.924 0.917 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
94. T11G6.1 hars-1 7908 7.579 0.968 0.970 0.956 0.970 0.966 0.923 0.948 0.878 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
95. Y23H5B.6 Y23H5B.6 5886 7.578 0.965 0.962 0.959 0.962 0.902 0.928 0.945 0.955
96. C43E11.1 acin-1 7781 7.577 0.915 0.956 0.969 0.956 0.976 0.902 0.947 0.956 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
97. F18E2.2 abcf-1 4708 7.577 0.939 0.953 0.957 0.953 0.952 0.946 0.959 0.918 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_506192]
98. K01G5.2 hpl-2 6781 7.575 0.946 0.955 0.985 0.955 0.962 0.939 0.886 0.947 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
99. F46B6.3 smg-4 4959 7.574 0.983 0.936 0.963 0.936 0.963 0.953 0.913 0.927 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
100. F11A10.2 repo-1 2791 7.574 0.935 0.949 0.907 0.949 0.959 0.942 0.964 0.969 REversed POlarity in early embryos [Source:RefSeq peptide;Acc:NP_502290]

There are 2302 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA