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Results for T01C3.7

Gene ID Gene Name Reads Transcripts Annotation
T01C3.7 fib-1 23572 T01C3.7.1, T01C3.7.2 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]

Genes with expression patterns similar to T01C3.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T01C3.7 fib-1 23572 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
2. Y113G7B.17 prmt-1 43709 7.89 0.988 0.980 0.978 0.980 0.995 0.994 0.985 0.990 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
3. W01B11.3 nol-5 23544 7.832 0.965 0.977 0.966 0.977 0.990 0.974 0.993 0.990 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
4. D2096.8 nap-1 59459 7.82 0.987 0.980 0.962 0.980 0.990 0.981 0.979 0.961 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
5. C25A1.10 dao-5 18351 7.801 0.977 0.973 0.965 0.973 0.989 0.988 0.966 0.970 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
6. C15H11.9 rrbs-1 9177 7.762 0.971 0.970 0.972 0.970 0.981 0.945 0.979 0.974 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
7. C03D6.8 rpl-24.2 5932 7.75 0.981 0.963 0.945 0.963 0.967 0.978 0.984 0.969 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
8. Y48B6A.3 xrn-2 4881 7.743 0.975 0.955 0.962 0.955 0.992 0.942 0.984 0.978 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
9. C16A3.3 let-716 8448 7.73 0.932 0.971 0.951 0.971 0.988 0.993 0.961 0.963
10. ZK945.3 puf-12 6266 7.726 0.880 0.988 0.966 0.988 0.994 0.983 0.966 0.961 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
11. W07E6.1 nol-1 7892 7.7 0.925 0.961 0.922 0.961 0.988 0.992 0.969 0.982 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
12. T23F6.4 rbd-1 5825 7.697 0.928 0.959 0.969 0.959 0.970 0.978 0.947 0.987 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
13. R13A5.12 lpd-7 10476 7.687 0.957 0.942 0.973 0.942 0.977 0.960 0.975 0.961 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
14. Y71G12B.8 ddx-27 3584 7.686 0.942 0.949 0.919 0.949 0.985 0.985 0.989 0.968 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
15. T21G5.3 glh-1 16470 7.684 0.976 0.957 0.966 0.957 0.964 0.985 0.949 0.930 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
16. T05G5.10 iff-1 42569 7.676 0.955 0.969 0.978 0.969 0.946 0.968 0.954 0.937 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
17. F56D12.5 vig-1 42594 7.667 0.974 0.965 0.961 0.965 0.944 0.984 0.948 0.926 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
18. T03D8.2 mrps-12 8253 7.662 0.966 0.956 0.976 0.956 0.983 0.953 0.969 0.903 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
19. C07E3.2 pro-2 4193 7.662 0.940 0.943 0.951 0.943 0.984 0.983 0.985 0.933 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
20. C27H6.2 ruvb-1 6291 7.654 0.955 0.942 0.934 0.942 0.970 0.992 0.963 0.956 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
21. C06A1.5 rpb-6 7515 7.652 0.938 0.957 0.953 0.957 0.957 0.944 0.976 0.970 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
22. Y18D10A.19 fkb-2 48128 7.644 0.984 0.974 0.954 0.974 0.943 0.971 0.913 0.931 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
23. Y54H5A.2 Y54H5A.2 2168 7.642 0.974 0.918 0.957 0.918 0.993 0.942 0.972 0.968
24. K07F5.15 K07F5.15 10171 7.641 0.943 0.952 0.945 0.952 0.971 0.990 0.938 0.950
25. T19A6.2 ngp-1 5884 7.64 0.953 0.937 0.953 0.937 0.977 0.973 0.947 0.963 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
26. F10G7.1 tag-151 9031 7.632 0.962 0.933 0.962 0.933 0.986 0.987 0.944 0.925 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
27. F55H2.6 clu-1 21404 7.626 0.971 0.947 0.937 0.947 0.973 0.967 0.973 0.911 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
28. F59A2.3 cri-3 15077 7.62 0.949 0.977 0.934 0.977 0.937 0.959 0.953 0.934 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
29. C01G8.6 hpo-32 7439 7.619 0.972 0.944 0.932 0.944 0.960 0.972 0.976 0.919
30. T07A9.9 nog-1 19728 7.614 0.961 0.972 0.967 0.972 0.938 0.948 0.916 0.940 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
31. B0414.3 hil-5 10816 7.612 0.847 0.936 0.945 0.936 0.984 0.990 0.991 0.983 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
32. F20A1.9 tofu-2 3341 7.612 0.945 0.940 0.972 0.940 0.979 0.969 0.959 0.908 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
33. R166.4 pro-1 2701 7.611 0.910 0.923 0.962 0.923 0.985 0.971 0.973 0.964 Pre-rRNA-processing protein pro-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22006]
34. Y23H5B.6 Y23H5B.6 5886 7.609 0.950 0.942 0.930 0.942 0.983 0.967 0.935 0.960
35. C56C10.8 icd-1 89788 7.608 0.956 0.962 0.969 0.962 0.936 0.949 0.961 0.913 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
36. T28D9.10 snr-3 9995 7.603 0.934 0.937 0.961 0.937 0.971 0.967 0.964 0.932 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
37. Y116A8C.42 snr-1 17062 7.597 0.966 0.938 0.934 0.938 0.974 0.978 0.975 0.894 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
38. K08F4.2 gtbp-1 25222 7.596 0.945 0.932 0.931 0.932 0.972 0.969 0.972 0.943 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
39. F58A4.9 rpac-19 2692 7.588 0.931 0.926 0.947 0.926 0.991 0.973 0.922 0.972 Probable DNA-directed RNA polymerases I and III subunit RPAC2 [Source:UniProtKB/Swiss-Prot;Acc:P34476]
40. Y37D8A.11 cec-7 8801 7.588 0.956 0.922 0.938 0.922 0.989 0.984 0.992 0.885 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
41. B0513.2 B0513.2 3641 7.585 0.926 0.928 0.935 0.928 0.981 0.947 0.980 0.960
42. Y53C12B.3 nos-3 20231 7.582 0.958 0.926 0.917 0.926 0.964 0.972 0.960 0.959 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
43. K07C5.6 K07C5.6 7375 7.581 0.968 0.845 0.974 0.845 0.997 0.993 0.970 0.989 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
44. F21H12.5 fbf-2 4640 7.581 0.933 0.938 0.922 0.938 0.983 0.978 0.971 0.918 Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09312]
45. F55F8.3 F55F8.3 2107 7.57 0.906 0.916 0.962 0.916 0.985 0.992 0.949 0.944 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
46. K01G5.8 K01G5.8 4694 7.565 0.978 0.845 0.957 0.845 0.980 0.979 0.997 0.984
47. F41G3.14 exos-8 2300 7.564 0.923 0.924 0.914 0.924 0.988 0.967 0.973 0.951 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
48. K09H9.6 lpd-6 5459 7.564 0.967 0.957 0.916 0.957 0.987 0.931 0.985 0.864 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
49. H12I13.4 fbf-1 5587 7.562 0.932 0.940 0.929 0.940 0.970 0.984 0.888 0.979 Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
50. F14B4.3 rpoa-2 7549 7.559 0.904 0.941 0.904 0.941 0.984 0.976 0.977 0.932 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
51. C34E10.11 mrps-26 4649 7.556 0.940 0.970 0.948 0.970 0.978 0.947 0.917 0.886 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
52. K08F11.3 cif-1 10218 7.552 0.948 0.955 0.960 0.955 0.934 0.946 0.913 0.941 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
53. Y75B12B.2 cyn-7 98281 7.552 0.975 0.966 0.945 0.966 0.920 0.901 0.960 0.919 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
54. D2023.5 mpst-1 10328 7.549 0.944 0.944 0.932 0.944 0.957 0.909 0.980 0.939 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
55. F55A12.8 nath-10 4253 7.548 0.878 0.941 0.956 0.941 0.987 0.964 0.959 0.922 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
56. Y54E5A.6 Y54E5A.6 770 7.544 0.962 0.910 0.936 0.910 0.978 0.960 0.933 0.955
57. C14A4.14 mrps-22 7966 7.543 0.961 0.929 0.955 0.929 0.938 0.933 0.954 0.944 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
58. F18A1.8 pid-1 3751 7.541 0.929 0.947 0.956 0.947 0.986 0.957 0.944 0.875 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
59. Y71H2AM.23 tufm-1 16206 7.54 0.957 0.957 0.918 0.957 0.946 0.958 0.923 0.924 TU elongation Factor (EF-Tu), Mitochondrial [Source:RefSeq peptide;Acc:NP_497623]
60. Y49E10.15 snr-6 8505 7.54 0.930 0.940 0.942 0.940 0.960 0.926 0.953 0.949 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
61. F18C5.3 tag-184 4027 7.538 0.897 0.953 0.935 0.953 0.973 0.973 0.978 0.876
62. C26E6.4 rpb-2 7053 7.538 0.937 0.940 0.928 0.940 0.961 0.951 0.942 0.939 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
63. Y18D10A.25 fkb-8 8968 7.538 0.963 0.961 0.940 0.961 0.931 0.903 0.914 0.965 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
64. K04C2.3 K04C2.3 23540 7.534 0.975 0.868 0.948 0.868 0.987 0.962 0.959 0.967
65. ZC434.5 ears-1 4725 7.53 0.900 0.947 0.940 0.947 0.937 0.972 0.953 0.934 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
66. K12H4.4 K12H4.4 8351 7.529 0.922 0.900 0.945 0.900 0.968 0.962 0.968 0.964 Probable signal peptidase complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34525]
67. C27H6.3 tofu-1 2992 7.529 0.936 0.927 0.956 0.927 0.978 0.961 0.963 0.881 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
68. T21C9.12 scpl-4 14723 7.528 0.947 0.960 0.950 0.960 0.925 0.963 0.886 0.937 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
69. T23G11.3 gld-1 41748 7.528 0.959 0.924 0.949 0.924 0.958 0.914 0.969 0.931 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
70. T24H7.1 phb-2 28775 7.525 0.961 0.940 0.933 0.940 0.951 0.928 0.973 0.899 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
71. T22F3.4 rpl-11.1 68403 7.525 0.977 0.947 0.982 0.947 0.937 0.830 0.940 0.965 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
72. Y14H12B.2 Y14H12B.2 6496 7.524 0.892 0.933 0.911 0.933 0.985 0.923 0.966 0.981
73. Y105E8B.3 riok-2 5531 7.523 0.970 0.936 0.944 0.936 0.975 0.970 0.892 0.900 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
74. T28D9.2 rsp-5 6460 7.522 0.903 0.950 0.909 0.950 0.970 0.947 0.968 0.925 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
75. Y50D7A.9 taco-1 5949 7.518 0.936 0.916 0.929 0.916 0.957 0.945 0.979 0.940 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
76. F28D1.1 wdr-46 4050 7.517 0.925 0.946 0.938 0.946 0.984 0.927 0.970 0.881 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
77. C26D10.1 ran-3 11111 7.517 0.874 0.943 0.959 0.943 0.943 0.975 0.976 0.904 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
78. R13F6.10 cra-1 11610 7.516 0.963 0.934 0.950 0.934 0.931 0.968 0.923 0.913 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
79. Y111B2A.17 elpc-2 3504 7.515 0.961 0.914 0.960 0.914 0.961 0.896 0.958 0.951 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
80. F09F7.3 rpc-2 9751 7.514 0.946 0.928 0.925 0.928 0.987 0.981 0.972 0.847 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
81. T02G5.9 kars-1 9763 7.513 0.910 0.934 0.950 0.934 0.955 0.962 0.942 0.926 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
82. C48B4.11 C48B4.11 4384 7.512 0.930 0.919 0.906 0.919 0.959 0.965 0.953 0.961
83. B0261.4 mrpl-47 8210 7.511 0.962 0.934 0.952 0.934 0.936 0.937 0.942 0.914 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
84. F53F4.12 F53F4.12 2683 7.509 0.936 0.876 0.935 0.876 0.979 0.958 0.964 0.985
85. C53D5.6 imb-3 28921 7.508 0.952 0.954 0.947 0.954 0.898 0.942 0.923 0.938 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
86. Y37E3.7 rla-1 55876 7.507 0.963 0.944 0.957 0.944 0.948 0.935 0.928 0.888 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
87. B0035.12 sart-3 7188 7.506 0.955 0.919 0.945 0.919 0.981 0.952 0.965 0.870 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
88. K12C11.2 smo-1 12784 7.505 0.898 0.948 0.910 0.948 0.961 0.976 0.934 0.930 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
89. Y71G12B.9 lin-65 7476 7.497 0.889 0.916 0.943 0.916 0.981 0.968 0.966 0.918 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
90. Y111B2A.2 Y111B2A.2 21569 7.497 0.903 0.962 0.945 0.962 0.964 0.953 0.920 0.888
91. T13H5.5 mrps-18B 3430 7.495 0.926 0.957 0.914 0.957 0.958 0.944 0.932 0.907 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
92. W06H3.3 ctps-1 8363 7.493 0.921 0.933 0.921 0.933 0.959 0.952 0.934 0.940 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
93. R144.7 larp-1 24669 7.491 0.980 0.961 0.916 0.961 0.928 0.954 0.876 0.915 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
94. F25H5.4 eef-2 34846 7.491 0.941 0.930 0.939 0.930 0.943 0.935 0.953 0.920 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
95. C05D11.10 mrps-17 4613 7.49 0.913 0.932 0.952 0.932 0.952 0.931 0.933 0.945 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
96. ZK430.1 toe-1 2458 7.49 0.917 0.945 0.916 0.945 0.979 0.949 0.897 0.942 HEAT repeat-containing protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23495]
97. C23G10.3 rps-3 69779 7.49 0.964 0.948 0.960 0.948 0.937 0.897 0.920 0.916 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
98. F52B5.6 rpl-25.2 100512 7.489 0.978 0.955 0.967 0.955 0.867 0.935 0.913 0.919 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
99. C34D4.12 cyn-12 7363 7.489 0.919 0.898 0.919 0.898 0.987 0.955 0.950 0.963 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
100. Y116A8A.9 map-2 5122 7.489 0.950 0.950 0.947 0.950 0.936 0.939 0.914 0.903 Methionine aminopeptidase 2 [Source:RefSeq peptide;Acc:NP_001255907]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA