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Results for Y56A3A.11

Gene ID Gene Name Reads Transcripts Annotation
Y56A3A.11 tsen-2 3247 Y56A3A.11 Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_499543]

Genes with expression patterns similar to Y56A3A.11

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y56A3A.11 tsen-2 3247 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_499543]
2. T06A10.4 lsy-13 7631 7.637 0.925 0.964 0.966 0.964 0.981 0.968 0.941 0.928
3. K11H3.6 mrpl-36 7328 7.622 0.936 0.969 0.945 0.969 0.979 0.984 0.948 0.892 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
4. T01E8.6 mrps-14 9328 7.612 0.930 0.956 0.939 0.956 0.983 0.974 0.963 0.911 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
5. T02G5.9 kars-1 9763 7.608 0.942 0.937 0.921 0.937 0.992 0.979 0.961 0.939 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
6. Y54E5A.4 npp-4 6288 7.608 0.917 0.952 0.981 0.952 0.982 0.951 0.974 0.899 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
7. W01G7.3 rpb-11 7826 7.605 0.910 0.953 0.968 0.953 0.975 0.987 0.951 0.908 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
8. Y97E10AR.5 rpb-9 3598 7.603 0.900 0.954 0.958 0.954 0.977 0.961 0.957 0.942 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
9. B0303.15 mrpl-11 9889 7.602 0.938 0.936 0.967 0.936 0.977 0.944 0.968 0.936 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
10. K01G5.4 ran-1 32379 7.592 0.885 0.959 0.964 0.959 0.980 0.976 0.950 0.919 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
11. C02B10.5 C02B10.5 9171 7.58 0.876 0.960 0.971 0.960 0.977 0.970 0.930 0.936
12. R07E5.14 rnp-4 11659 7.578 0.916 0.957 0.972 0.957 0.973 0.979 0.946 0.878 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
13. T17E9.2 nmt-1 8017 7.578 0.933 0.956 0.957 0.956 0.957 0.959 0.922 0.938 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
14. T19B4.2 npp-7 13073 7.576 0.873 0.965 0.968 0.965 0.978 0.949 0.955 0.923 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
15. T12G3.5 mrpl-51 5192 7.567 0.943 0.928 0.944 0.928 0.973 0.963 0.976 0.912 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
16. F33D4.5 mrpl-1 5337 7.565 0.918 0.948 0.980 0.948 0.980 0.961 0.925 0.905 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
17. Y37E3.15 npp-13 7250 7.564 0.856 0.969 0.962 0.969 0.981 0.953 0.956 0.918 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
18. Y39G10AR.7 ekl-7 7072 7.563 0.861 0.964 0.974 0.964 0.988 0.966 0.932 0.914
19. T08B2.9 fars-1 12650 7.562 0.922 0.941 0.958 0.941 0.971 0.966 0.939 0.924 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
20. F59E12.11 sam-4 8179 7.562 0.898 0.959 0.974 0.959 0.970 0.973 0.952 0.877
21. T28D9.10 snr-3 9995 7.562 0.926 0.943 0.927 0.943 0.975 0.974 0.951 0.923 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
22. T14B4.3 T14B4.3 2875 7.561 0.932 0.932 0.965 0.932 0.988 0.989 0.925 0.898
23. Y43F4B.4 npp-18 4780 7.56 0.899 0.959 0.958 0.959 0.976 0.960 0.944 0.905 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
24. Y73B6BL.32 lsm-8 11002 7.559 0.948 0.935 0.953 0.935 0.977 0.965 0.984 0.862 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
25. F56F3.1 ifet-1 25772 7.556 0.927 0.950 0.964 0.950 0.971 0.957 0.966 0.871 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
26. F23F1.1 nfyc-1 9983 7.555 0.868 0.949 0.975 0.949 0.979 0.983 0.924 0.928 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
27. C47B2.9 C47B2.9 4096 7.552 0.909 0.919 0.947 0.919 0.990 0.985 0.956 0.927
28. T16G1.11 eif-3.K 14014 7.549 0.908 0.943 0.949 0.943 0.981 0.976 0.921 0.928 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
29. F42A6.7 hrp-1 28201 7.548 0.884 0.942 0.975 0.942 0.983 0.956 0.937 0.929 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
30. F53F10.5 npp-11 3378 7.547 0.896 0.961 0.962 0.961 0.977 0.968 0.954 0.868 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
31. K11D12.2 pqn-51 15951 7.546 0.897 0.962 0.975 0.962 0.984 0.954 0.931 0.881 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
32. T12E12.2 cec-6 4758 7.545 0.887 0.935 0.971 0.935 0.983 0.974 0.980 0.880 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
33. T05H4.6 erfa-1 12542 7.545 0.958 0.929 0.946 0.929 0.963 0.960 0.924 0.936 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
34. F26F4.11 rpb-8 7601 7.542 0.939 0.969 0.953 0.969 0.975 0.967 0.919 0.851 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
35. Y62E10A.11 mdt-9 5971 7.542 0.915 0.967 0.972 0.967 0.965 0.982 0.955 0.819 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
36. F22D6.3 nars-1 18624 7.542 0.891 0.961 0.950 0.961 0.981 0.977 0.874 0.947 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
37. T23B12.3 mrps-2 5434 7.54 0.905 0.903 0.960 0.903 0.981 0.990 0.969 0.929 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
38. Y17G7A.1 hmg-12 29989 7.54 0.881 0.954 0.971 0.954 0.980 0.977 0.928 0.895 HMG [Source:RefSeq peptide;Acc:NP_496544]
39. ZK652.1 snr-5 5993 7.539 0.928 0.932 0.951 0.932 0.979 0.979 0.923 0.915 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
40. Y54E5B.3 let-49 2437 7.536 0.904 0.956 0.981 0.956 0.968 0.914 0.939 0.918 Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]
41. Y116A8C.42 snr-1 17062 7.536 0.900 0.944 0.962 0.944 0.975 0.982 0.954 0.875 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
42. B0205.11 mrpl-9 9162 7.533 0.925 0.952 0.956 0.952 0.983 0.953 0.951 0.861 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
43. W02F12.6 sna-1 7338 7.532 0.870 0.957 0.963 0.957 0.990 0.939 0.948 0.908 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
44. PAR2.1 mtss-1 4055 7.532 0.937 0.925 0.945 0.925 0.985 0.955 0.965 0.895 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
45. T10F2.4 prp-19 11298 7.531 0.906 0.958 0.969 0.958 0.973 0.938 0.937 0.892 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
46. W04D2.5 mrps-11 5757 7.531 0.936 0.948 0.959 0.948 0.980 0.930 0.920 0.910 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
47. W06H3.3 ctps-1 8363 7.528 0.916 0.940 0.974 0.940 0.973 0.972 0.947 0.866 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
48. Y73B6BL.3 exos-2 2624 7.527 0.914 0.956 0.954 0.956 0.953 0.956 0.950 0.888 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
49. F58D5.1 hrp-2 17211 7.526 0.886 0.937 0.958 0.937 0.973 0.958 0.941 0.936 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
50. Y54G11A.3 Y54G11A.3 7161 7.526 0.891 0.952 0.954 0.952 0.970 0.966 0.958 0.883
51. Y56A3A.20 ccf-1 18463 7.524 0.914 0.962 0.971 0.962 0.951 0.936 0.900 0.928 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
52. Y37D8A.11 cec-7 8801 7.524 0.851 0.952 0.972 0.952 0.981 0.953 0.950 0.913 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
53. F28H1.3 aars-2 13537 7.519 0.870 0.936 0.977 0.936 0.985 0.976 0.937 0.902 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
54. F33D4.7 emc-6 6534 7.519 0.939 0.934 0.972 0.934 0.966 0.952 0.941 0.881 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
55. ZK742.1 xpo-1 20741 7.516 0.804 0.959 0.981 0.959 0.987 0.968 0.939 0.919 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
56. Y111B2A.18 rsp-3 43731 7.514 0.872 0.950 0.960 0.950 0.967 0.966 0.934 0.915 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
57. Y71F9B.16 dnj-30 4262 7.513 0.943 0.961 0.965 0.961 0.953 0.934 0.860 0.936 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
58. R74.8 R74.8 7722 7.513 0.899 0.965 0.983 0.965 0.942 0.909 0.931 0.919
59. C48B4.11 C48B4.11 4384 7.513 0.859 0.956 0.970 0.956 0.980 0.969 0.926 0.897
60. T23H2.1 npp-12 12425 7.512 0.863 0.957 0.981 0.957 0.981 0.979 0.936 0.858 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
61. C08B11.5 sap-49 10553 7.511 0.875 0.959 0.956 0.959 0.980 0.973 0.948 0.861 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
62. T09A5.7 T09A5.7 5907 7.511 0.917 0.944 0.927 0.944 0.977 0.963 0.922 0.917
63. C36B1.3 rpb-3 4442 7.508 0.875 0.949 0.962 0.949 0.978 0.962 0.915 0.918 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
64. C18E9.6 tomm-40 13426 7.507 0.928 0.919 0.933 0.919 0.980 0.967 0.920 0.941 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
65. W02B12.3 rsp-1 9235 7.506 0.902 0.942 0.973 0.942 0.968 0.978 0.878 0.923 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
66. ZK616.6 perm-3 16186 7.505 0.901 0.935 0.959 0.935 0.967 0.961 0.921 0.926 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
67. F58E10.3 ddx-17 15107 7.503 0.857 0.943 0.976 0.943 0.971 0.959 0.938 0.916 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
68. R151.9 pfd-5 6951 7.502 0.903 0.942 0.957 0.942 0.966 0.959 0.921 0.912 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
69. K08E7.1 eak-7 18960 7.501 0.871 0.966 0.974 0.966 0.979 0.943 0.935 0.867 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
70. Y102A5A.1 cand-1 11808 7.501 0.926 0.958 0.961 0.958 0.950 0.927 0.901 0.920 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
71. Y39G10AR.9 Y39G10AR.9 3972 7.5 0.877 0.960 0.923 0.960 0.966 0.962 0.937 0.915
72. F43G9.9 cpn-1 14505 7.497 0.884 0.961 0.983 0.961 0.958 0.953 0.922 0.875 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
73. F32A5.7 lsm-4 3785 7.496 0.892 0.939 0.968 0.939 0.982 0.970 0.939 0.867 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
74. Y34D9A.1 mrpl-38 5291 7.495 0.858 0.943 0.956 0.943 0.974 0.981 0.919 0.921 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
75. ZK1010.3 frg-1 3533 7.494 0.843 0.962 0.978 0.962 0.984 0.920 0.947 0.898 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
76. C01F6.8 icln-1 6586 7.493 0.909 0.945 0.965 0.945 0.964 0.984 0.953 0.828 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
77. C25D7.8 otub-1 7941 7.493 0.908 0.953 0.963 0.953 0.981 0.938 0.924 0.873 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
78. Y49A3A.5 cyn-1 6411 7.493 0.903 0.941 0.896 0.941 0.979 0.985 0.939 0.909 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
79. Y66D12A.22 tin-10 6041 7.492 0.946 0.905 0.913 0.905 0.985 0.955 0.939 0.944 Mitochondrial import inner membrane translocase subunit Tim10 [Source:UniProtKB/Swiss-Prot;Acc:Q9Y0V6]
80. C27B7.1 spr-2 14958 7.491 0.829 0.967 0.971 0.967 0.980 0.951 0.921 0.905 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
81. C34E10.5 prmt-5 12277 7.491 0.895 0.931 0.965 0.931 0.980 0.961 0.940 0.888 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
82. D1054.14 prp-38 6504 7.491 0.926 0.949 0.956 0.949 0.952 0.953 0.868 0.938 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
83. F26F4.10 rars-1 9971 7.489 0.859 0.941 0.967 0.941 0.971 0.950 0.948 0.912 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
84. F32H2.4 thoc-3 3861 7.489 0.858 0.966 0.963 0.966 0.982 0.964 0.907 0.883 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
85. C15H11.4 dhs-22 21674 7.488 0.897 0.956 0.978 0.956 0.959 0.931 0.915 0.896 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
86. R12C12.2 ran-5 14517 7.487 0.873 0.962 0.968 0.962 0.980 0.947 0.940 0.855 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
87. K08F4.2 gtbp-1 25222 7.487 0.887 0.936 0.959 0.936 0.972 0.957 0.937 0.903 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
88. Y37D8A.9 mrg-1 14369 7.487 0.822 0.954 0.969 0.954 0.973 0.981 0.950 0.884 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
89. C08F8.1 pfd-1 10199 7.486 0.941 0.940 0.934 0.940 0.969 0.972 0.945 0.845 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
90. F58B3.5 mars-1 6729 7.484 0.897 0.918 0.934 0.918 0.984 0.974 0.950 0.909 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
91. Y38A8.3 ulp-2 7403 7.484 0.857 0.945 0.979 0.945 0.990 0.960 0.921 0.887 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
92. Y54E2A.3 tac-1 6308 7.484 0.842 0.962 0.958 0.962 0.981 0.940 0.930 0.909 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
93. Y57G11C.34 mrps-7 3450 7.483 0.947 0.930 0.915 0.930 0.981 0.959 0.906 0.915 28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11]
94. K07A12.7 mrps-15 6325 7.483 0.918 0.933 0.898 0.933 0.979 0.956 0.954 0.912 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
95. Y46G5A.4 snrp-200 13827 7.481 0.801 0.950 0.967 0.950 0.985 0.964 0.926 0.938 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
96. F31C3.5 psf-2 1813 7.48 0.949 0.936 0.955 0.936 0.902 0.962 0.972 0.868 Probable DNA replication complex GINS protein PSF2 [Source:UniProtKB/Swiss-Prot;Acc:O62193]
97. Y54E10A.7 mrpl-17 2791 7.48 0.932 0.918 0.904 0.918 0.960 0.960 0.959 0.929 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_491114]
98. C52E4.6 cyl-1 6405 7.48 0.880 0.950 0.940 0.950 0.980 0.964 0.933 0.883 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
99. T28D9.2 rsp-5 6460 7.479 0.847 0.942 0.971 0.942 0.960 0.959 0.952 0.906 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
100. B0464.7 baf-1 10161 7.479 0.909 0.955 0.931 0.955 0.973 0.961 0.919 0.876 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA