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Results for C42D4.8

Gene ID Gene Name Reads Transcripts Annotation
C42D4.8 rpc-1 5000 C42D4.8 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_501127]

Genes with expression patterns similar to C42D4.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C42D4.8 rpc-1 5000 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_501127]
2. C05D2.5 xnd-1 5516 7.634 0.936 0.975 0.936 0.975 0.948 0.962 0.956 0.946 X chromosome NonDisjunction factor [Source:RefSeq peptide;Acc:NP_498207]
3. C23G10.8 C23G10.8 4642 7.614 0.887 0.968 0.948 0.968 0.923 0.951 0.986 0.983
4. F09F7.3 rpc-2 9751 7.596 0.896 0.961 0.910 0.961 0.948 0.976 0.967 0.977 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
5. Y38E10A.6 ceh-100 5505 7.594 0.943 0.973 0.931 0.973 0.937 0.970 0.929 0.938 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
6. C04G2.6 dis-3 5048 7.579 0.939 0.959 0.936 0.959 0.901 0.974 0.962 0.949 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
7. Y71G12B.9 lin-65 7476 7.55 0.939 0.962 0.908 0.962 0.923 0.954 0.945 0.957 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
8. F44G4.4 tdp-1 3335 7.543 0.848 0.937 0.966 0.937 0.944 0.971 0.968 0.972 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
9. B0414.5 cpb-3 11584 7.533 0.883 0.957 0.963 0.957 0.918 0.961 0.948 0.946 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
10. Y41D4B.19 npp-8 12992 7.533 0.918 0.951 0.927 0.951 0.903 0.963 0.966 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
11. Y47D3A.26 smc-3 6256 7.53 0.931 0.945 0.946 0.945 0.908 0.953 0.931 0.971 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
12. Y53C12B.3 nos-3 20231 7.527 0.890 0.953 0.938 0.953 0.895 0.959 0.982 0.957 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
13. Y37D8A.9 mrg-1 14369 7.524 0.889 0.949 0.965 0.949 0.902 0.955 0.961 0.954 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
14. F14B4.3 rpoa-2 7549 7.523 0.928 0.954 0.916 0.954 0.903 0.965 0.963 0.940 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
15. ZK1128.6 ttll-4 6059 7.522 0.853 0.958 0.964 0.958 0.938 0.977 0.930 0.944 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
16. T08G5.5 vps-39 4669 7.52 0.897 0.954 0.920 0.954 0.953 0.978 0.936 0.928 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_001041163]
17. ZK1251.9 dcaf-1 10926 7.52 0.912 0.930 0.946 0.930 0.906 0.940 0.970 0.986 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
18. Y39E4B.2 snpc-1.2 5800 7.512 0.869 0.964 0.968 0.964 0.951 0.943 0.948 0.905 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
19. F55A12.8 nath-10 4253 7.508 0.907 0.950 0.879 0.950 0.932 0.970 0.952 0.968 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
20. F54D5.11 F54D5.11 2756 7.508 0.868 0.941 0.952 0.941 0.928 0.951 0.970 0.957 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
21. B0035.12 sart-3 7188 7.504 0.889 0.964 0.904 0.964 0.957 0.938 0.936 0.952 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
22. T09E8.2 him-17 4153 7.498 0.909 0.942 0.925 0.942 0.882 0.991 0.944 0.963 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
23. F55F8.3 F55F8.3 2107 7.494 0.912 0.967 0.860 0.967 0.955 0.927 0.938 0.968 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
24. C46A5.9 hcf-1 6295 7.493 0.870 0.972 0.954 0.972 0.892 0.949 0.965 0.919 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
25. T28D9.2 rsp-5 6460 7.491 0.878 0.941 0.941 0.941 0.935 0.958 0.949 0.948 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
26. F32H2.1 snpc-4 7581 7.487 0.910 0.950 0.945 0.950 0.871 0.953 0.966 0.942 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
27. F53A2.4 nud-1 7818 7.486 0.829 0.955 0.905 0.955 0.949 0.970 0.944 0.979 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
28. W06H3.2 pus-1 1382 7.484 0.908 0.968 0.912 0.968 0.896 0.976 0.910 0.946 tRNA pseudouridine synthase [Source:RefSeq peptide;Acc:NP_507242]
29. C01G8.3 dhs-1 5394 7.483 0.882 0.956 0.938 0.956 0.911 0.932 0.941 0.967 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491557]
30. F55G1.8 plk-3 12036 7.479 0.941 0.953 0.939 0.953 0.884 0.898 0.940 0.971 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
31. C02F5.4 cids-1 3125 7.477 0.873 0.942 0.912 0.942 0.963 0.988 0.901 0.956 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
32. F59A2.1 npp-9 34375 7.475 0.908 0.939 0.901 0.939 0.895 0.967 0.962 0.964 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
33. R06F6.1 cdl-1 14167 7.475 0.866 0.930 0.951 0.930 0.911 0.968 0.964 0.955 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
34. C04H5.6 mog-4 4517 7.471 0.969 0.948 0.903 0.948 0.920 0.951 0.895 0.937 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
35. C14A4.4 crn-3 6558 7.469 0.921 0.966 0.896 0.966 0.889 0.944 0.937 0.950 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
36. Y59A8A.2 phf-14 1407 7.467 0.913 0.921 0.936 0.921 0.923 0.958 0.944 0.951 PHd Finger family [Source:RefSeq peptide;Acc:NP_507508]
37. F28D1.1 wdr-46 4050 7.467 0.921 0.904 0.880 0.904 0.954 0.972 0.968 0.964 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
38. C18E9.3 szy-20 6819 7.466 0.880 0.961 0.912 0.961 0.878 0.972 0.943 0.959 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
39. F52F12.4 lsl-1 4055 7.464 0.902 0.942 0.891 0.942 0.960 0.949 0.928 0.950 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
40. F56D2.6 ddx-15 12282 7.463 0.923 0.967 0.940 0.967 0.870 0.943 0.908 0.945 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
41. Y116A8C.42 snr-1 17062 7.463 0.850 0.951 0.933 0.951 0.903 0.933 0.970 0.972 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
42. F26H9.1 prom-1 6444 7.462 0.889 0.948 0.945 0.948 0.925 0.951 0.929 0.927 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
43. Y23H5B.6 Y23H5B.6 5886 7.458 0.897 0.956 0.900 0.956 0.908 0.942 0.969 0.930
44. Y14H12B.2 Y14H12B.2 6496 7.458 0.881 0.935 0.936 0.935 0.960 0.945 0.939 0.927
45. F45E12.2 brf-1 4667 7.457 0.935 0.936 0.918 0.936 0.901 0.962 0.958 0.911 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
46. F10G7.3 unc-85 5206 7.456 0.881 0.937 0.966 0.937 0.877 0.922 0.966 0.970 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
47. F46F11.2 cey-2 47143 7.456 0.914 0.956 0.850 0.956 0.917 0.953 0.931 0.979 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
48. Y18D10A.1 attf-6 6942 7.456 0.946 0.942 0.945 0.942 0.887 0.928 0.914 0.952 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
49. F32E10.1 nol-10 3225 7.455 0.910 0.928 0.952 0.928 0.898 0.953 0.937 0.949 NucleOLar protein [Source:RefSeq peptide;Acc:NP_501233]
50. M01E11.5 cey-3 20931 7.455 0.855 0.926 0.916 0.926 0.927 0.969 0.964 0.972 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
51. R03D7.7 nos-1 8407 7.454 0.873 0.931 0.917 0.931 0.917 0.978 0.954 0.953 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
52. Y46G5A.4 snrp-200 13827 7.454 0.966 0.958 0.939 0.958 0.863 0.942 0.910 0.918 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
53. D2030.4 D2030.4 13261 7.452 0.895 0.909 0.908 0.909 0.913 0.973 0.970 0.975 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:P90789]
54. F44E2.8 F44E2.8 12814 7.452 0.933 0.945 0.956 0.945 0.954 0.929 0.853 0.937
55. B0464.2 ctr-9 7610 7.451 0.924 0.934 0.936 0.934 0.913 0.929 0.926 0.955 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
56. C41C4.6 ulp-4 13338 7.449 0.887 0.929 0.921 0.929 0.942 0.946 0.942 0.953 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
57. F41H10.11 sand-1 5039 7.448 0.861 0.922 0.912 0.922 0.975 0.964 0.949 0.943 SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
58. E02H1.3 tag-124 2189 7.448 0.887 0.919 0.917 0.919 0.909 0.977 0.945 0.975 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
59. W03F8.4 W03F8.4 20285 7.447 0.914 0.928 0.929 0.928 0.867 0.942 0.970 0.969
60. W01A8.5 tofu-5 5678 7.446 0.865 0.947 0.909 0.947 0.923 0.959 0.953 0.943 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
61. C01F6.4 fem-3 2478 7.445 0.872 0.930 0.886 0.930 0.912 0.962 0.973 0.980 Sex-determination protein fem-3 [Source:UniProtKB/Swiss-Prot;Acc:P34691]
62. C07H6.5 cgh-1 60576 7.444 0.894 0.907 0.906 0.907 0.914 0.972 0.961 0.983 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
63. C36A4.5 maph-1.3 15493 7.444 0.867 0.936 0.951 0.936 0.907 0.934 0.955 0.958 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
64. Y37D8A.11 cec-7 8801 7.44 0.886 0.941 0.936 0.941 0.905 0.957 0.958 0.916 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
65. F18C5.2 wrn-1 3792 7.439 0.917 0.957 0.930 0.957 0.872 0.937 0.905 0.964 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
66. ZK686.3 ZK686.3 23487 7.438 0.846 0.924 0.958 0.924 0.935 0.945 0.969 0.937 Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34669]
67. W06E11.4 sbds-1 6701 7.438 0.867 0.952 0.876 0.952 0.905 0.967 0.960 0.959 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
68. F10E7.6 F10E7.6 2788 7.435 0.861 0.920 0.964 0.920 0.850 0.977 0.970 0.973
69. Y43F4B.3 set-25 8036 7.434 0.914 0.951 0.936 0.951 0.903 0.954 0.949 0.876 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
70. T26A8.1 T26A8.1 4387 7.43 0.896 0.931 0.915 0.931 0.903 0.949 0.955 0.950
71. M88.7 cisd-3.1 5713 7.428 0.879 0.941 0.942 0.941 0.892 0.937 0.954 0.942 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
72. K08F4.2 gtbp-1 25222 7.428 0.835 0.964 0.921 0.964 0.882 0.973 0.948 0.941 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
73. C48E7.2 let-611 2191 7.427 0.871 0.961 0.945 0.961 0.969 0.945 0.836 0.939
74. C34E10.2 gop-2 5684 7.427 0.867 0.934 0.924 0.934 0.912 0.961 0.949 0.946 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
75. Y56A3A.17 npp-16 5391 7.426 0.883 0.952 0.968 0.952 0.859 0.932 0.924 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
76. B0393.2 rbg-3 6701 7.426 0.887 0.952 0.945 0.952 0.881 0.897 0.960 0.952 RaB GAP related [Source:RefSeq peptide;Acc:NP_497979]
77. Y71F9B.4 snr-7 13542 7.426 0.819 0.961 0.887 0.961 0.915 0.968 0.973 0.942 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
78. R07E5.14 rnp-4 11659 7.426 0.844 0.956 0.935 0.956 0.890 0.930 0.963 0.952 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
79. D1007.8 D1007.8 1265 7.423 0.910 0.924 0.941 0.924 0.913 0.964 0.949 0.898
80. C24B5.2 spas-1 3372 7.422 0.858 0.959 0.928 0.959 0.965 0.934 0.935 0.884 Probable spastin homolog spas-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8MNV0]
81. F26B1.3 ima-2 18826 7.422 0.881 0.907 0.934 0.907 0.941 0.936 0.953 0.963 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
82. Y66D12A.5 ceh-92 1571 7.421 0.828 0.932 0.940 0.932 0.906 0.964 0.937 0.982 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_499497]
83. T07G12.6 zim-1 1330 7.421 0.814 0.959 0.933 0.959 0.939 0.936 0.917 0.964 Zinc finger In Meiosis [Source:RefSeq peptide;Acc:NP_501948]
84. CC4.3 smu-1 4169 7.42 0.853 0.943 0.955 0.943 0.879 0.960 0.956 0.931 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
85. F02A9.6 glp-1 5613 7.419 0.867 0.959 0.933 0.959 0.962 0.892 0.956 0.891
86. C50F2.3 C50F2.3 3084 7.416 0.930 0.926 0.944 0.926 0.931 0.992 0.891 0.876
87. Y38C9A.2 cgp-1 11756 7.416 0.889 0.917 0.922 0.917 0.906 0.960 0.939 0.966 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
88. Y39A1A.12 orc-1 3169 7.415 0.909 0.917 0.893 0.917 0.953 0.915 0.934 0.977 ORC (Origin Recognition Complex) subunit [Source:RefSeq peptide;Acc:NP_499347]
89. F16D3.4 tbcd-1 2159 7.414 0.861 0.951 0.934 0.951 0.924 0.932 0.913 0.948 TuBulin folding Cofactor D homolog [Source:RefSeq peptide;Acc:NP_492270]
90. K01G5.1 rnf-113 4336 7.413 0.879 0.921 0.911 0.921 0.913 0.974 0.927 0.967 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
91. C06G3.2 klp-18 4885 7.412 0.887 0.953 0.885 0.953 0.921 0.963 0.942 0.908 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_501093]
92. F48E8.3 F48E8.3 4186 7.41 0.917 0.899 0.908 0.899 0.881 0.967 0.972 0.967
93. T23D8.7 hpo-24 4372 7.409 0.874 0.919 0.918 0.919 0.977 0.932 0.958 0.912
94. C26E6.7 eri-9 8069 7.409 0.878 0.931 0.896 0.931 0.930 0.945 0.939 0.959 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
95. T14B4.2 T14B4.2 4487 7.408 0.845 0.914 0.916 0.914 0.936 0.964 0.945 0.974
96. T04H1.4 rad-50 2736 7.407 0.934 0.959 0.915 0.959 0.839 0.958 0.941 0.902 DNA repair protein rad-50 [Source:UniProtKB/Swiss-Prot;Acc:O44199]
97. Y41D4B.13 ced-2 10100 7.407 0.884 0.920 0.945 0.920 0.881 0.929 0.965 0.963 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
98. R06A4.4 imb-2 10302 7.404 0.870 0.934 0.949 0.934 0.891 0.953 0.934 0.939 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
99. F58E10.3 ddx-17 15107 7.403 0.884 0.962 0.918 0.962 0.850 0.947 0.943 0.937 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
100. F52B5.3 F52B5.3 2077 7.403 0.833 0.954 0.942 0.954 0.939 0.935 0.940 0.906

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA