C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F25G6.2

Gene ID Gene Name Reads Transcripts Annotation
F25G6.2 symk-1 2880 F25G6.2 SYMpleKin cleavage and polyadenylation factor [Source:RefSeq peptide;Acc:NP_505210]

Genes with expression patterns similar to F25G6.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F25G6.2 symk-1 2880 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SYMpleKin cleavage and polyadenylation factor [Source:RefSeq peptide;Acc:NP_505210]
2. F18C5.2 wrn-1 3792 7.634 0.908 0.977 0.940 0.977 0.982 0.938 0.968 0.944 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
3. T05H4.14 gad-1 7979 7.605 0.925 0.960 0.926 0.960 0.979 0.955 0.953 0.947 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
4. C35D10.9 ced-4 3446 7.602 0.924 0.955 0.962 0.955 0.976 0.940 0.935 0.955 Cell death protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P30429]
5. ZK381.1 him-3 4913 7.593 0.915 0.956 0.950 0.956 0.970 0.963 0.945 0.938 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
6. F55G1.8 plk-3 12036 7.577 0.943 0.985 0.934 0.985 0.974 0.931 0.896 0.929 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
7. T26A5.5 jhdm-1 12698 7.574 0.948 0.975 0.940 0.975 0.973 0.936 0.945 0.882 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
8. ZK353.1 cyy-1 5745 7.567 0.885 0.942 0.958 0.942 0.977 0.961 0.922 0.980 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
9. Y56A3A.17 npp-16 5391 7.564 0.923 0.959 0.939 0.959 0.967 0.931 0.949 0.937 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
10. C05C8.6 hpo-9 8263 7.563 0.932 0.973 0.926 0.973 0.980 0.917 0.955 0.907
11. Y47D3A.26 smc-3 6256 7.563 0.952 0.952 0.927 0.952 0.974 0.957 0.882 0.967 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
12. F56D2.6 ddx-15 12282 7.556 0.917 0.966 0.953 0.966 0.965 0.915 0.974 0.900 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
13. T23H2.1 npp-12 12425 7.553 0.939 0.947 0.942 0.947 0.967 0.937 0.934 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
14. Y38E10A.6 ceh-100 5505 7.553 0.930 0.954 0.915 0.954 0.969 0.957 0.919 0.955 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
15. F30F8.3 gras-1 5902 7.551 0.854 0.959 0.937 0.959 0.973 0.954 0.966 0.949 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
16. Y46G5A.4 snrp-200 13827 7.55 0.957 0.964 0.938 0.964 0.968 0.927 0.965 0.867 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
17. Y38A8.3 ulp-2 7403 7.549 0.948 0.962 0.915 0.962 0.969 0.960 0.959 0.874 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
18. F52C9.7 mog-3 9880 7.545 0.915 0.945 0.926 0.945 0.986 0.954 0.971 0.903 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
19. T22C1.3 T22C1.3 2305 7.544 0.928 0.949 0.922 0.949 0.962 0.979 0.904 0.951
20. Y54H5A.3 tag-262 4269 7.544 0.902 0.979 0.974 0.979 0.940 0.890 0.955 0.925
21. C23G10.8 C23G10.8 4642 7.543 0.918 0.968 0.936 0.968 0.962 0.967 0.876 0.948
22. T28D9.2 rsp-5 6460 7.536 0.939 0.948 0.939 0.948 0.956 0.960 0.938 0.908 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
23. Y41D4B.19 npp-8 12992 7.535 0.946 0.949 0.937 0.949 0.969 0.969 0.889 0.927 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
24. Y71G12B.9 lin-65 7476 7.533 0.946 0.967 0.928 0.967 0.973 0.948 0.907 0.897 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
25. F29C4.6 tut-1 5637 7.53 0.898 0.970 0.882 0.970 0.973 0.953 0.966 0.918 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
26. ZK1128.6 ttll-4 6059 7.525 0.923 0.977 0.956 0.977 0.965 0.933 0.896 0.898 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
27. Y17G7A.1 hmg-12 29989 7.523 0.941 0.968 0.926 0.968 0.974 0.898 0.946 0.902 HMG [Source:RefSeq peptide;Acc:NP_496544]
28. C02B10.5 C02B10.5 9171 7.523 0.923 0.957 0.952 0.957 0.964 0.940 0.949 0.881
29. Y53C12B.3 nos-3 20231 7.522 0.939 0.966 0.927 0.966 0.973 0.935 0.910 0.906 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
30. F28C6.6 suf-1 3642 7.521 0.923 0.963 0.891 0.963 0.976 0.905 0.971 0.929 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
31. Y65B4BL.2 deps-1 18277 7.52 0.929 0.969 0.938 0.969 0.963 0.903 0.973 0.876
32. R12C12.2 ran-5 14517 7.517 0.930 0.955 0.909 0.955 0.972 0.941 0.934 0.921 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
33. C34E10.5 prmt-5 12277 7.515 0.927 0.956 0.922 0.956 0.971 0.947 0.962 0.874 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
34. ZK328.2 eftu-2 7040 7.514 0.953 0.958 0.902 0.958 0.961 0.908 0.975 0.899 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
35. K02F2.4 ulp-5 3433 7.514 0.922 0.941 0.949 0.941 0.968 0.896 0.950 0.947 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
36. W08D2.5 catp-6 7281 7.513 0.934 0.927 0.956 0.927 0.968 0.933 0.926 0.942 Probable cation-transporting ATPase W08D2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q27533]
37. F10E9.8 sas-4 3703 7.509 0.915 0.948 0.930 0.948 0.966 0.884 0.941 0.977 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
38. F59A2.1 npp-9 34375 7.508 0.943 0.956 0.936 0.956 0.977 0.959 0.860 0.921 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
39. C14A4.4 crn-3 6558 7.508 0.934 0.972 0.870 0.972 0.944 0.922 0.964 0.930 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
40. C28H8.9 dpff-1 8684 7.506 0.941 0.951 0.959 0.951 0.940 0.880 0.941 0.943 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
41. F54D5.11 F54D5.11 2756 7.504 0.922 0.941 0.941 0.941 0.942 0.952 0.886 0.979 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
42. K07A12.2 egg-6 18331 7.502 0.877 0.951 0.929 0.951 0.972 0.945 0.924 0.953 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
43. ZK507.6 cya-1 6807 7.502 0.902 0.966 0.965 0.966 0.903 0.893 0.974 0.933 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
44. T19B4.2 npp-7 13073 7.502 0.936 0.956 0.952 0.956 0.961 0.954 0.901 0.886 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
45. C27B7.1 spr-2 14958 7.502 0.908 0.960 0.940 0.960 0.957 0.927 0.971 0.879 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
46. Y51H1A.4 ing-3 8617 7.499 0.913 0.941 0.932 0.941 0.968 0.967 0.899 0.938 Inhibitor of growth protein [Source:RefSeq peptide;Acc:NP_496909]
47. F33D4.5 mrpl-1 5337 7.499 0.897 0.959 0.932 0.959 0.974 0.919 0.960 0.899 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
48. Y54E5A.4 npp-4 6288 7.499 0.917 0.962 0.960 0.962 0.967 0.920 0.928 0.883 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
49. C08B11.5 sap-49 10553 7.497 0.906 0.958 0.936 0.958 0.956 0.908 0.949 0.926 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
50. Y37A1B.1 lst-3 10739 7.497 0.958 0.969 0.898 0.969 0.931 0.914 0.962 0.896 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
51. F57B9.7 flap-1 5377 7.49 0.901 0.941 0.945 0.941 0.975 0.936 0.897 0.954 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
52. Y41D4B.13 ced-2 10100 7.489 0.918 0.952 0.953 0.952 0.986 0.932 0.845 0.951 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
53. F23F1.1 nfyc-1 9983 7.488 0.944 0.959 0.920 0.959 0.973 0.913 0.945 0.875 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
54. C25A1.4 C25A1.4 15507 7.486 0.883 0.939 0.947 0.939 0.980 0.952 0.914 0.932
55. B0523.3 pgl-2 1583 7.485 0.933 0.924 0.906 0.924 0.983 0.943 0.948 0.924 P granule abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34266]
56. Y43F4B.4 npp-18 4780 7.485 0.911 0.960 0.956 0.960 0.965 0.897 0.908 0.928 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
57. T25G3.3 T25G3.3 7285 7.484 0.896 0.972 0.910 0.972 0.952 0.946 0.939 0.897
58. D2030.6 prg-1 26751 7.483 0.920 0.956 0.947 0.956 0.942 0.927 0.935 0.900 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
59. ZK1251.9 dcaf-1 10926 7.482 0.928 0.959 0.947 0.959 0.976 0.921 0.876 0.916 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
60. C46A5.9 hcf-1 6295 7.482 0.925 0.967 0.962 0.967 0.967 0.969 0.880 0.845 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
61. F01G4.5 F01G4.5 2097 7.481 0.941 0.921 0.963 0.921 0.957 0.910 0.938 0.930
62. Y80D3A.2 emb-4 3717 7.479 0.928 0.934 0.935 0.934 0.928 0.923 0.964 0.933
63. Y116A8C.42 snr-1 17062 7.479 0.927 0.958 0.934 0.958 0.978 0.906 0.880 0.938 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
64. C36B1.5 prp-4 2714 7.478 0.884 0.956 0.913 0.956 0.965 0.954 0.930 0.920 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
65. T04A8.11 mrpl-16 5998 7.478 0.877 0.953 0.944 0.953 0.960 0.924 0.939 0.928 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
66. F09E8.3 msh-5 2136 7.478 0.899 0.939 0.957 0.939 0.941 0.950 0.967 0.886 MutS protein homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q19272]
67. Y23H5B.6 Y23H5B.6 5886 7.478 0.936 0.969 0.924 0.969 0.962 0.924 0.898 0.896
68. Y37D8A.9 mrg-1 14369 7.477 0.934 0.944 0.963 0.944 0.981 0.927 0.893 0.891 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
69. F42A10.1 abcf-3 5557 7.476 0.919 0.952 0.894 0.952 0.967 0.895 0.947 0.950 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
70. F32H2.1 snpc-4 7581 7.476 0.940 0.952 0.919 0.952 0.960 0.931 0.926 0.896 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
71. F49D11.1 prp-17 5338 7.475 0.943 0.940 0.927 0.940 0.971 0.912 0.910 0.932 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
72. Y18D10A.16 Y18D10A.16 2881 7.475 0.943 0.912 0.954 0.912 0.933 0.950 0.937 0.934
73. Y39G10AR.7 ekl-7 7072 7.475 0.933 0.954 0.948 0.954 0.966 0.942 0.891 0.887
74. C08B6.9 aos-1 3892 7.475 0.900 0.949 0.957 0.949 0.961 0.915 0.904 0.940 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
75. C52E4.6 cyl-1 6405 7.474 0.921 0.970 0.900 0.970 0.959 0.886 0.955 0.913 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
76. R06F6.1 cdl-1 14167 7.474 0.886 0.942 0.954 0.942 0.973 0.957 0.885 0.935 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
77. C26E6.4 rpb-2 7053 7.474 0.920 0.964 0.925 0.964 0.956 0.934 0.951 0.860 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
78. R53.2 dtmk-1 6821 7.474 0.885 0.955 0.889 0.955 0.960 0.953 0.927 0.950 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
79. Y51H1A.5 hda-10 2012 7.474 0.905 0.924 0.958 0.924 0.980 0.947 0.928 0.908 Histone DeAcetylase [Source:RefSeq peptide;Acc:NP_496910]
80. ZK1320.12 taf-8 3558 7.474 0.887 0.932 0.931 0.932 0.962 0.951 0.951 0.928 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
81. ZK973.2 cec-10 7108 7.473 0.924 0.945 0.880 0.945 0.974 0.895 0.965 0.945 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
82. C04H5.6 mog-4 4517 7.471 0.899 0.957 0.892 0.957 0.961 0.959 0.958 0.888 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
83. K01G5.1 rnf-113 4336 7.471 0.906 0.955 0.910 0.955 0.959 0.956 0.883 0.947 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
84. D2030.8 D2030.8 2645 7.47 0.880 0.944 0.921 0.944 0.946 0.964 0.929 0.942
85. B0035.12 sart-3 7188 7.47 0.933 0.971 0.916 0.971 0.959 0.922 0.870 0.928 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
86. F32E10.6 cec-5 10643 7.469 0.942 0.929 0.940 0.929 0.952 0.948 0.963 0.866 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
87. K09H9.6 lpd-6 5459 7.468 0.927 0.914 0.943 0.914 0.968 0.945 0.901 0.956 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
88. F56F3.1 ifet-1 25772 7.467 0.868 0.971 0.934 0.971 0.967 0.931 0.901 0.924 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
89. W03G1.6 pig-1 5015 7.466 0.916 0.931 0.927 0.931 0.979 0.931 0.960 0.891 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
90. C26B2.6 elpc-4 3600 7.466 0.871 0.976 0.917 0.976 0.976 0.946 0.868 0.936 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
91. F32H2.4 thoc-3 3861 7.466 0.910 0.950 0.914 0.950 0.957 0.910 0.969 0.906 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
92. F25B5.2 nop-1 4127 7.466 0.917 0.938 0.920 0.938 0.958 0.910 0.963 0.922 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
93. T27E9.5 pssy-2 2579 7.465 0.930 0.944 0.882 0.944 0.959 0.920 0.977 0.909 PhosphatidylSerine SYnthase [Source:RefSeq peptide;Acc:NP_499786]
94. F59E12.2 zyg-1 1718 7.463 0.940 0.948 0.883 0.948 0.966 0.944 0.971 0.863 Probable serine/threonine-protein kinase zyg-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GT24]
95. F38B7.5 duo-1 3087 7.463 0.873 0.936 0.946 0.936 0.954 0.924 0.956 0.938 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_505931]
96. R05D3.11 met-2 3364 7.463 0.956 0.967 0.908 0.967 0.913 0.907 0.968 0.877 Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
97. B0336.1 wrm-1 8284 7.461 0.906 0.930 0.960 0.930 0.968 0.928 0.934 0.905 Armadillo repeat-containing protein wrm-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10953]
98. W03F8.4 W03F8.4 20285 7.461 0.923 0.949 0.963 0.949 0.942 0.911 0.875 0.949
99. F57C9.5 htp-3 2363 7.461 0.843 0.941 0.917 0.941 0.980 0.961 0.960 0.918 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_491458]
100. D1081.8 cdc-5L 8553 7.461 0.913 0.965 0.956 0.965 0.940 0.884 0.945 0.893 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]

There are 1978 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA