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Results for R08D7.2

Gene ID Gene Name Reads Transcripts Annotation
R08D7.2 R08D7.2 1635 R08D7.2.1, R08D7.2.2 Putative RNA polymerase II subunit B1 CTD phosphatase R08D7.2 [Source:UniProtKB/Swiss-Prot;Acc:P30641]

Genes with expression patterns similar to R08D7.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R08D7.2 R08D7.2 1635 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Putative RNA polymerase II subunit B1 CTD phosphatase R08D7.2 [Source:UniProtKB/Swiss-Prot;Acc:P30641]
2. F19F10.11 F19F10.11 2683 7.607 0.959 0.940 0.946 0.940 0.980 0.923 0.968 0.951
3. T26A5.5 jhdm-1 12698 7.603 0.972 0.934 0.975 0.934 0.978 0.962 0.956 0.892 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
4. B0464.2 ctr-9 7610 7.56 0.964 0.958 0.956 0.958 0.932 0.941 0.950 0.901 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
5. M106.1 mix-1 7950 7.54 0.946 0.917 0.971 0.917 0.941 0.934 0.948 0.966 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
6. F36F2.3 rbpl-1 15376 7.532 0.957 0.922 0.928 0.922 0.982 0.931 0.945 0.945 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
7. T05F1.6 hsr-9 13312 7.531 0.902 0.941 0.950 0.941 0.979 0.939 0.939 0.940
8. C17E4.10 C17E4.10 7034 7.527 0.924 0.916 0.951 0.916 0.973 0.962 0.942 0.943
9. F38A5.13 dnj-11 19678 7.524 0.956 0.929 0.971 0.929 0.967 0.915 0.896 0.961 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
10. E01A2.4 let-504 9788 7.524 0.955 0.909 0.915 0.909 0.981 0.981 0.939 0.935
11. C18G1.5 hil-4 21692 7.523 0.881 0.946 0.935 0.946 0.987 0.949 0.950 0.929 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
12. T05E8.3 let-355 8169 7.522 0.919 0.939 0.964 0.939 0.968 0.944 0.939 0.910
13. F43G9.10 mfap-1 9205 7.52 0.952 0.901 0.954 0.901 0.936 0.964 0.954 0.958 MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
14. H38K22.1 evl-14 3704 7.517 0.918 0.933 0.942 0.933 0.951 0.970 0.960 0.910
15. Y18D10A.1 attf-6 6942 7.509 0.955 0.921 0.944 0.921 0.955 0.966 0.920 0.927 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
16. B0041.7 xnp-1 9187 7.508 0.948 0.922 0.959 0.922 0.962 0.916 0.965 0.914 Transcriptional regulator ATRX homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U7E0]
17. D2005.5 drh-3 2293 7.507 0.942 0.910 0.940 0.910 0.958 0.931 0.950 0.966 Dicer Related Helicase [Source:RefSeq peptide;Acc:NP_492161]
18. T13F2.7 sna-2 4771 7.505 0.937 0.893 0.942 0.893 0.972 0.981 0.968 0.919 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
19. F41E6.4 smk-1 22394 7.5 0.962 0.933 0.964 0.933 0.950 0.915 0.919 0.924 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
20. Y61A9LA.8 sut-2 11388 7.499 0.922 0.953 0.935 0.953 0.987 0.937 0.937 0.875 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
21. C53D5.6 imb-3 28921 7.498 0.885 0.934 0.923 0.934 0.992 0.940 0.936 0.954 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
22. F56D1.7 daz-1 23684 7.496 0.942 0.907 0.963 0.907 0.985 0.972 0.903 0.917 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
23. Y105E8A.17 ekl-4 4732 7.493 0.893 0.927 0.958 0.927 0.970 0.939 0.965 0.914
24. C32F10.5 hmg-3 5776 7.492 0.943 0.925 0.922 0.925 0.989 0.971 0.922 0.895 FACT complex subunit ssrp1-B [Source:UniProtKB/Swiss-Prot;Acc:O01683]
25. R11A8.7 R11A8.7 15531 7.488 0.930 0.913 0.926 0.913 0.946 0.987 0.941 0.932 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
26. M01E5.5 top-1 25458 7.488 0.947 0.932 0.938 0.932 0.939 0.936 0.951 0.913 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
27. R13F6.10 cra-1 11610 7.488 0.937 0.947 0.935 0.947 0.981 0.934 0.913 0.894 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
28. W03F9.5 ttb-1 8682 7.488 0.880 0.950 0.961 0.950 0.957 0.918 0.915 0.957 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
29. F55F8.4 cir-1 9437 7.487 0.952 0.883 0.951 0.883 0.973 0.963 0.956 0.926 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
30. ZK328.2 eftu-2 7040 7.487 0.934 0.920 0.951 0.920 0.951 0.962 0.938 0.911 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
31. C36B1.8 gls-1 8617 7.486 0.908 0.921 0.961 0.921 0.979 0.954 0.967 0.875 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
32. R06A4.7 mes-2 2612 7.486 0.928 0.918 0.919 0.918 0.957 0.948 0.938 0.960 Histone-lysine N-methyltransferase mes-2 [Source:UniProtKB/Swiss-Prot;Acc:O17514]
33. F22D6.5 prpf-4 9522 7.483 0.928 0.926 0.963 0.926 0.951 0.935 0.945 0.909 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
34. R05H5.3 R05H5.3 15041 7.482 0.892 0.924 0.961 0.924 0.983 0.937 0.932 0.929
35. K08E3.8 mdt-29 4678 7.481 0.899 0.934 0.952 0.934 0.977 0.961 0.897 0.927 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
36. C43E11.1 acin-1 7781 7.481 0.936 0.915 0.948 0.915 0.986 0.969 0.929 0.883 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
37. K12D12.2 npp-3 6914 7.48 0.908 0.919 0.960 0.919 0.980 0.969 0.903 0.922 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
38. R119.4 pqn-59 16065 7.479 0.958 0.872 0.960 0.872 0.965 0.961 0.966 0.925 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
39. F18E2.3 scc-3 13464 7.476 0.913 0.914 0.960 0.914 0.965 0.971 0.918 0.921 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
40. F35G12.8 smc-4 6202 7.473 0.930 0.934 0.939 0.934 0.971 0.944 0.881 0.940 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
41. C05C8.4 gei-6 6026 7.472 0.892 0.943 0.958 0.943 0.976 0.933 0.887 0.940 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
42. ZC395.8 ztf-8 5521 7.47 0.888 0.891 0.962 0.891 0.977 0.974 0.943 0.944 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
43. K03H1.2 mog-1 4057 7.47 0.941 0.926 0.944 0.926 0.972 0.940 0.917 0.904 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
44. F56D2.6 ddx-15 12282 7.463 0.948 0.920 0.951 0.920 0.958 0.917 0.931 0.918 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
45. C39E9.12 C39E9.12 3588 7.459 0.920 0.957 0.934 0.957 0.933 0.935 0.926 0.897
46. EEED8.5 mog-5 4698 7.456 0.941 0.939 0.967 0.939 0.981 0.955 0.913 0.821 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]
47. F28B3.7 him-1 18274 7.455 0.949 0.928 0.949 0.928 0.984 0.954 0.925 0.838 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
48. T01G9.4 npp-2 5361 7.454 0.918 0.932 0.936 0.932 0.957 0.966 0.876 0.937 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
49. F46B6.3 smg-4 4959 7.45 0.914 0.909 0.941 0.909 0.968 0.942 0.957 0.910 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
50. Y47G6A.2 inx-22 3576 7.45 0.911 0.945 0.950 0.945 0.951 0.949 0.883 0.916 Innexin [Source:RefSeq peptide;Acc:NP_491186]
51. D2030.6 prg-1 26751 7.45 0.953 0.896 0.957 0.896 0.983 0.965 0.921 0.879 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
52. F32H2.1 snpc-4 7581 7.449 0.930 0.945 0.953 0.945 0.957 0.909 0.892 0.918 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
53. F32E10.6 cec-5 10643 7.448 0.908 0.909 0.963 0.909 0.982 0.965 0.956 0.856 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
54. Y81G3A.3 gcn-2 5831 7.447 0.897 0.940 0.923 0.940 0.960 0.934 0.904 0.949 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
55. C38D4.3 mel-28 3515 7.446 0.952 0.906 0.932 0.906 0.966 0.976 0.918 0.890
56. F18C5.2 wrn-1 3792 7.441 0.916 0.923 0.948 0.923 0.959 0.965 0.946 0.861 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
57. F48E8.6 disl-2 8774 7.439 0.930 0.908 0.970 0.908 0.978 0.917 0.931 0.897 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
58. C06E7.1 sams-3 26921 7.438 0.913 0.914 0.948 0.914 0.990 0.933 0.921 0.905 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
59. Y47G6A.8 crn-1 3494 7.438 0.907 0.916 0.921 0.916 0.976 0.951 0.955 0.896 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
60. F52C9.7 mog-3 9880 7.438 0.893 0.939 0.949 0.939 0.952 0.961 0.914 0.891 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
61. F10G8.3 rae-1 7542 7.438 0.876 0.941 0.949 0.941 0.990 0.977 0.939 0.825 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
62. T09A5.8 cec-3 5813 7.438 0.845 0.938 0.910 0.938 0.972 0.976 0.936 0.923 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
63. B0035.3 B0035.3 4118 7.436 0.901 0.937 0.946 0.937 0.959 0.939 0.938 0.879
64. D2089.1 rsp-7 11057 7.434 0.926 0.930 0.946 0.930 0.963 0.940 0.930 0.869 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
65. F25B5.2 nop-1 4127 7.433 0.879 0.938 0.943 0.938 0.987 0.970 0.947 0.831 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
66. F52C9.8 pqe-1 7546 7.433 0.929 0.938 0.928 0.938 0.950 0.903 0.959 0.888 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
67. T20G5.11 rde-4 3966 7.432 0.908 0.905 0.944 0.905 0.979 0.979 0.900 0.912 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
68. R07G3.3 npp-21 3792 7.431 0.882 0.935 0.937 0.935 0.972 0.962 0.878 0.930 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
69. C50C3.6 prp-8 19582 7.43 0.915 0.931 0.928 0.931 0.987 0.922 0.872 0.944 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
70. Y110A7A.8 prp-31 4436 7.43 0.893 0.902 0.912 0.902 0.983 0.972 0.893 0.973 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
71. ZK856.12 hpo-40 7855 7.428 0.935 0.895 0.960 0.895 0.981 0.949 0.924 0.889
72. C08B11.5 sap-49 10553 7.427 0.877 0.927 0.920 0.927 0.992 0.931 0.909 0.944 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
73. C26E6.5 fsn-1 6615 7.427 0.872 0.933 0.955 0.933 0.947 0.958 0.911 0.918 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
74. T06D10.2 chaf-1 8121 7.426 0.902 0.912 0.906 0.912 0.953 0.952 0.920 0.969 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
75. F46A9.4 skr-2 16831 7.425 0.916 0.894 0.957 0.894 0.992 0.950 0.915 0.907 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
76. Y53H1C.1 aat-9 5713 7.425 0.869 0.948 0.954 0.948 0.943 0.920 0.914 0.929 Amino Acid Transporter [Source:RefSeq peptide;Acc:NP_001021788]
77. Y53H1A.5 nfya-2 4166 7.425 0.847 0.936 0.914 0.936 0.962 0.954 0.919 0.957 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
78. T05H10.2 apn-1 5628 7.423 0.916 0.931 0.945 0.931 0.964 0.969 0.911 0.856 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
79. T04A8.14 emb-5 11746 7.422 0.910 0.939 0.964 0.939 0.978 0.934 0.899 0.859 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
80. F44A2.1 tag-153 16535 7.42 0.921 0.929 0.971 0.929 0.951 0.903 0.874 0.942
81. T07D4.3 rha-1 5898 7.42 0.905 0.944 0.934 0.944 0.976 0.917 0.909 0.891 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
82. C50A2.2 cec-2 4169 7.42 0.871 0.938 0.942 0.938 0.973 0.920 0.876 0.962 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
83. T23B12.7 dnj-22 2874 7.418 0.933 0.839 0.957 0.839 0.961 0.968 0.972 0.949 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_505178]
84. W02D9.1 pri-2 6048 7.418 0.895 0.955 0.946 0.955 0.973 0.933 0.918 0.843 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
85. B0035.11 leo-1 2968 7.417 0.911 0.911 0.934 0.911 0.924 0.963 0.956 0.907 RNA polymerase-associated protein LEO1 [Source:UniProtKB/Swiss-Prot;Acc:Q17431]
86. F01G4.3 skih-2 3353 7.417 0.927 0.920 0.932 0.920 0.969 0.926 0.911 0.912 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
87. Y65B4BL.2 deps-1 18277 7.417 0.925 0.924 0.939 0.924 0.987 0.957 0.913 0.848
88. Y38F2AR.1 eri-5 1443 7.415 0.906 0.943 0.895 0.943 0.943 0.940 0.892 0.953 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_500199]
89. C37C3.1 C37C3.1 2206 7.415 0.937 0.898 0.939 0.898 0.959 0.957 0.914 0.913
90. F12F6.3 rib-1 10524 7.414 0.868 0.933 0.958 0.933 0.951 0.887 0.942 0.942 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
91. T10F2.4 prp-19 11298 7.413 0.865 0.932 0.942 0.932 0.984 0.950 0.885 0.923 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
92. T23G11.7 T23G11.7 10001 7.413 0.869 0.933 0.963 0.933 0.929 0.945 0.927 0.914
93. Y49F6B.4 smu-2 4164 7.413 0.904 0.926 0.945 0.926 0.935 0.980 0.931 0.866 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
94. F08B4.5 pole-2 8234 7.413 0.922 0.941 0.926 0.941 0.977 0.961 0.890 0.855 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
95. Y37A1B.1 lst-3 10739 7.412 0.944 0.887 0.935 0.887 0.950 0.953 0.957 0.899 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
96. Y54E5A.4 npp-4 6288 7.412 0.877 0.949 0.938 0.949 0.974 0.959 0.885 0.881 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
97. F53H1.3 F53H1.3 1530 7.412 0.906 0.914 0.919 0.914 0.952 0.960 0.946 0.901
98. K04C2.4 brd-1 2439 7.41 0.871 0.929 0.943 0.929 0.940 0.957 0.956 0.885 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
99. Y46G5A.4 snrp-200 13827 7.41 0.955 0.895 0.955 0.895 0.980 0.940 0.916 0.874 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
100. F45G2.3 exo-1 1969 7.409 0.913 0.902 0.916 0.902 0.901 0.973 0.970 0.932 EXOnuclease [Source:RefSeq peptide;Acc:NP_499770]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA