C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for JC8.6

Gene ID Gene Name Reads Transcripts Annotation
JC8.6 lin-54 5789 JC8.6a, JC8.6b

Genes with expression patterns similar to JC8.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. JC8.6 lin-54 5789 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. R06F6.1 cdl-1 14167 7.749 0.938 0.973 0.967 0.973 0.986 0.964 0.967 0.981 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
3. F26B1.3 ima-2 18826 7.726 0.971 0.963 0.968 0.963 0.951 0.958 0.979 0.973 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
4. K07A1.11 rba-1 3421 7.72 0.979 0.977 0.953 0.977 0.983 0.958 0.975 0.918 Probable histone-binding protein rba-1 [Source:UniProtKB/Swiss-Prot;Acc:P90917]
5. Y37D8A.9 mrg-1 14369 7.716 0.964 0.970 0.957 0.970 0.983 0.937 0.971 0.964 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
6. Y48G1A.5 xpo-2 11748 7.715 0.940 0.964 0.950 0.964 0.979 0.985 0.976 0.957 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
7. Y71G12B.9 lin-65 7476 7.711 0.969 0.964 0.965 0.964 0.972 0.949 0.978 0.950 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
8. Y41D4B.19 npp-8 12992 7.693 0.967 0.971 0.963 0.971 0.986 0.925 0.968 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
9. F59A2.1 npp-9 34375 7.685 0.964 0.973 0.935 0.973 0.967 0.934 0.978 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
10. M03C11.4 hat-1 3839 7.684 0.933 0.965 0.977 0.965 0.977 0.957 0.935 0.975 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
11. Y53C12B.3 nos-3 20231 7.675 0.916 0.970 0.936 0.970 0.979 0.973 0.957 0.974 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
12. B0491.1 B0491.1 2131 7.672 0.943 0.960 0.949 0.960 0.968 0.945 0.979 0.968
13. F10E9.8 sas-4 3703 7.669 0.966 0.977 0.974 0.977 0.951 0.947 0.940 0.937 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
14. EEED8.1 tofu-6 3962 7.668 0.973 0.966 0.972 0.966 0.945 0.947 0.927 0.972 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
15. C26E6.7 eri-9 8069 7.665 0.959 0.985 0.991 0.985 0.976 0.935 0.936 0.898 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
16. Y39G10AR.13 icp-1 3445 7.66 0.955 0.967 0.939 0.967 0.959 0.947 0.955 0.971 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
17. C30G12.7 puf-8 5785 7.657 0.964 0.977 0.979 0.977 0.915 0.904 0.975 0.966 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
18. W03F8.4 W03F8.4 20285 7.652 0.927 0.976 0.935 0.976 0.964 0.953 0.974 0.947
19. B0240.4 npp-22 5510 7.651 0.920 0.962 0.963 0.962 0.975 0.965 0.935 0.969 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
20. F45E12.2 brf-1 4667 7.651 0.963 0.980 0.965 0.980 0.968 0.960 0.978 0.857 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
21. Y55F3AM.12 dcap-1 8679 7.651 0.923 0.978 0.979 0.978 0.968 0.940 0.949 0.936 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
22. Y113G7B.5 fog-2 2753 7.65 0.938 0.982 0.942 0.982 0.954 0.953 0.937 0.962 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
23. ZK632.1 mcm-6 9164 7.645 0.918 0.968 0.971 0.968 0.956 0.956 0.958 0.950 DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
24. T24D1.5 har-2 2882 7.644 0.950 0.957 0.973 0.957 0.970 0.932 0.962 0.943
25. T23G5.1 rnr-1 5022 7.64 0.978 0.982 0.953 0.982 0.927 0.933 0.956 0.929 Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q03604]
26. F53A3.2 polh-1 2467 7.639 0.961 0.965 0.968 0.965 0.976 0.924 0.939 0.941 POLH (DNA polymerase eta) homolog [Source:RefSeq peptide;Acc:NP_497480]
27. Y47D3A.26 smc-3 6256 7.639 0.956 0.953 0.962 0.953 0.975 0.941 0.934 0.965 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
28. R12C12.2 ran-5 14517 7.638 0.962 0.983 0.967 0.983 0.958 0.907 0.952 0.926 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
29. F48E8.7 skpt-1 2308 7.636 0.953 0.939 0.981 0.939 0.977 0.944 0.949 0.954 SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
30. K06A5.7 cdc-25.1 14961 7.633 0.953 0.986 0.981 0.986 0.957 0.886 0.932 0.952 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
31. R53.6 psf-1 4721 7.632 0.936 0.956 0.976 0.956 0.972 0.944 0.959 0.933 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
32. F52C9.7 mog-3 9880 7.63 0.971 0.972 0.964 0.972 0.974 0.954 0.905 0.918 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
33. C25D7.6 mcm-3 15241 7.628 0.947 0.973 0.972 0.973 0.934 0.898 0.969 0.962 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
34. F28B12.3 vrk-1 7133 7.627 0.975 0.968 0.963 0.968 0.962 0.931 0.950 0.910 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]
35. F58A4.4 pri-1 1493 7.624 0.946 0.951 0.949 0.951 0.971 0.923 0.968 0.965 DNA primase small subunit [Source:UniProtKB/Swiss-Prot;Acc:P34471]
36. T09A5.8 cec-3 5813 7.623 0.963 0.985 0.973 0.985 0.940 0.938 0.872 0.967 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
37. Y69A2AR.30 mdf-2 6403 7.618 0.932 0.959 0.967 0.959 0.953 0.953 0.954 0.941 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
38. F10E9.7 F10E9.7 1842 7.616 0.936 0.916 0.978 0.916 0.965 0.978 0.955 0.972
39. K04G2.2 aho-3 15189 7.616 0.956 0.981 0.974 0.981 0.977 0.913 0.924 0.910
40. F10G7.3 unc-85 5206 7.616 0.951 0.975 0.925 0.975 0.974 0.955 0.923 0.938 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
41. Y39E4B.2 snpc-1.2 5800 7.612 0.927 0.948 0.943 0.948 0.949 0.975 0.970 0.952 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
42. T05H4.14 gad-1 7979 7.61 0.961 0.975 0.969 0.975 0.949 0.950 0.881 0.950 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
43. T26A8.1 T26A8.1 4387 7.61 0.942 0.976 0.946 0.976 0.977 0.945 0.908 0.940
44. R06A4.4 imb-2 10302 7.609 0.968 0.948 0.968 0.948 0.979 0.935 0.933 0.930 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
45. ZK1320.12 taf-8 3558 7.608 0.959 0.938 0.972 0.938 0.974 0.967 0.895 0.965 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
46. F18C5.2 wrn-1 3792 7.607 0.953 0.963 0.971 0.963 0.958 0.960 0.879 0.960 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
47. Y53C10A.12 hsf-1 7899 7.604 0.966 0.975 0.974 0.975 0.956 0.904 0.935 0.919 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
48. F55G1.8 plk-3 12036 7.603 0.964 0.973 0.957 0.973 0.959 0.940 0.911 0.926 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
49. T09E8.2 him-17 4153 7.603 0.965 0.967 0.971 0.967 0.978 0.928 0.912 0.915 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
50. C37A2.4 cye-1 4158 7.602 0.942 0.976 0.961 0.976 0.979 0.919 0.918 0.931 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
51. F23F1.1 nfyc-1 9983 7.602 0.943 0.962 0.967 0.962 0.963 0.949 0.909 0.947 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
52. R07E5.14 rnp-4 11659 7.601 0.936 0.972 0.947 0.972 0.978 0.914 0.941 0.941 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
53. H26D21.2 msh-2 2115 7.6 0.943 0.964 0.927 0.964 0.975 0.894 0.984 0.949 MSH (MutS Homolog) family [Source:RefSeq peptide;Acc:NP_491202]
54. Y18D10A.16 Y18D10A.16 2881 7.6 0.951 0.945 0.944 0.945 0.922 0.965 0.957 0.971
55. C02F5.4 cids-1 3125 7.597 0.964 0.954 0.951 0.954 0.932 0.946 0.972 0.924 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
56. F52F12.4 lsl-1 4055 7.596 0.952 0.952 0.969 0.952 0.951 0.929 0.953 0.938 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
57. C26D10.1 ran-3 11111 7.596 0.937 0.948 0.922 0.948 0.954 0.954 0.986 0.947 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
58. W02F12.6 sna-1 7338 7.594 0.967 0.981 0.979 0.981 0.945 0.946 0.895 0.900 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
59. F59B2.6 zif-1 10453 7.593 0.912 0.958 0.958 0.958 0.957 0.959 0.948 0.943 Zinc finger-interacting factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P34482]
60. C55B7.1 glh-2 3622 7.592 0.948 0.956 0.942 0.956 0.950 0.924 0.955 0.961 ATP-dependent RNA helicase glh-2 [Source:UniProtKB/Swiss-Prot;Acc:Q966L9]
61. T28D9.2 rsp-5 6460 7.592 0.954 0.935 0.943 0.935 0.945 0.956 0.950 0.974 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
62. T22C1.3 T22C1.3 2305 7.592 0.950 0.962 0.968 0.962 0.973 0.917 0.918 0.942
63. K07A12.2 egg-6 18331 7.592 0.969 0.977 0.965 0.977 0.943 0.943 0.919 0.899 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
64. F32D1.10 mcm-7 21233 7.59 0.935 0.967 0.952 0.967 0.938 0.908 0.949 0.974 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
65. F14D2.13 bath-28 1965 7.589 0.930 0.966 0.964 0.966 0.976 0.937 0.971 0.879 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_871999]
66. F53G12.5 mex-3 29076 7.587 0.908 0.942 0.951 0.942 0.961 0.980 0.957 0.946 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
67. F48E8.3 F48E8.3 4186 7.586 0.929 0.952 0.951 0.952 0.967 0.956 0.949 0.930
68. M01E11.5 cey-3 20931 7.586 0.933 0.956 0.954 0.956 0.984 0.953 0.948 0.902 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
69. F43G9.5 cfim-1 9169 7.586 0.939 0.972 0.960 0.972 0.980 0.917 0.920 0.926 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
70. ZK1128.6 ttll-4 6059 7.586 0.916 0.963 0.948 0.963 0.971 0.923 0.965 0.937 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
71. C05C8.5 C05C8.5 2655 7.585 0.917 0.979 0.899 0.979 0.969 0.951 0.932 0.959
72. R03D7.7 nos-1 8407 7.584 0.947 0.976 0.942 0.976 0.943 0.953 0.921 0.926 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
73. K01G5.4 ran-1 32379 7.584 0.955 0.971 0.960 0.971 0.910 0.930 0.936 0.951 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
74. F44G4.4 tdp-1 3335 7.582 0.946 0.966 0.933 0.966 0.944 0.955 0.956 0.916 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
75. F46F11.2 cey-2 47143 7.581 0.971 0.948 0.944 0.948 0.973 0.932 0.959 0.906 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
76. C48B4.7 C48B4.7 4006 7.581 0.890 0.958 0.945 0.958 0.974 0.985 0.938 0.933
77. Y37D8A.11 cec-7 8801 7.58 0.920 0.964 0.946 0.964 0.956 0.947 0.973 0.910 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
78. Y41D4B.13 ced-2 10100 7.58 0.971 0.953 0.970 0.953 0.975 0.890 0.951 0.917 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
79. T25G3.4 T25G3.4 9394 7.578 0.902 0.958 0.922 0.958 0.956 0.943 0.978 0.961 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
80. F26H9.1 prom-1 6444 7.576 0.945 0.969 0.967 0.969 0.983 0.932 0.971 0.840 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
81. ZK616.4 swsn-6 2791 7.576 0.956 0.970 0.975 0.970 0.972 0.914 0.916 0.903 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_500801]
82. C34E10.2 gop-2 5684 7.576 0.938 0.958 0.946 0.958 0.967 0.932 0.921 0.956 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
83. C36A4.8 brc-1 1664 7.576 0.949 0.974 0.952 0.974 0.931 0.921 0.936 0.939 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
84. T24H10.3 dnj-23 11446 7.575 0.955 0.982 0.974 0.982 0.969 0.932 0.931 0.850 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
85. F32H2.1 snpc-4 7581 7.575 0.940 0.965 0.965 0.965 0.930 0.944 0.917 0.949 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
86. F21D5.2 otub-3 8469 7.574 0.920 0.955 0.956 0.955 0.971 0.915 0.965 0.937 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_001255319]
87. Y14H12B.2 Y14H12B.2 6496 7.574 0.950 0.934 0.966 0.934 0.946 0.918 0.968 0.958
88. W03D2.4 pcn-1 20288 7.574 0.939 0.962 0.966 0.962 0.919 0.928 0.945 0.953 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
89. Y17G7B.5 mcm-2 6246 7.572 0.974 0.968 0.961 0.968 0.925 0.912 0.932 0.932 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
90. F14B4.3 rpoa-2 7549 7.571 0.909 0.936 0.945 0.936 0.969 0.967 0.968 0.941 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
91. Y39G10AR.7 ekl-7 7072 7.571 0.923 0.983 0.965 0.983 0.920 0.943 0.908 0.946
92. Y102A5C.1 fbxa-206 1513 7.571 0.914 0.936 0.972 0.936 0.980 0.977 0.945 0.911 F-box A protein [Source:RefSeq peptide;Acc:NP_507275]
93. W01A8.5 tofu-5 5678 7.571 0.954 0.959 0.975 0.959 0.974 0.914 0.936 0.900 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
94. D2030.8 D2030.8 2645 7.57 0.914 0.965 0.955 0.965 0.920 0.959 0.926 0.966
95. C35D10.9 ced-4 3446 7.57 0.960 0.967 0.957 0.967 0.981 0.874 0.944 0.920 Cell death protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P30429]
96. C07H6.5 cgh-1 60576 7.568 0.942 0.923 0.949 0.923 0.985 0.976 0.954 0.916 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
97. F32E10.1 nol-10 3225 7.568 0.906 0.934 0.943 0.934 0.974 0.926 0.974 0.977 NucleOLar protein [Source:RefSeq peptide;Acc:NP_501233]
98. K01G5.2 hpl-2 6781 7.565 0.917 0.955 0.929 0.955 0.960 0.946 0.944 0.959 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
99. Y43F4B.3 set-25 8036 7.564 0.951 0.969 0.969 0.969 0.958 0.946 0.934 0.868 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
100. K04G7.11 K04G7.11 6153 7.564 0.963 0.953 0.972 0.953 0.914 0.979 0.908 0.922 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]

There are 2759 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA