C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for F18E2.2

Gene ID Gene Name Reads Transcripts Annotation
F18E2.2 abcf-1 4708 F18E2.2 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_506192]

Genes with expression patterns similar to F18E2.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F18E2.2 abcf-1 4708 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_506192]
2. F58D5.1 hrp-2 17211 7.694 0.951 0.948 0.973 0.948 0.967 0.977 0.966 0.964 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
3. T16G1.11 eif-3.K 14014 7.68 0.945 0.945 0.938 0.945 0.982 0.990 0.980 0.955 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
4. C18E9.6 tomm-40 13426 7.673 0.931 0.949 0.956 0.949 0.985 0.981 0.961 0.961 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
5. Y46G5A.4 snrp-200 13827 7.66 0.927 0.947 0.967 0.947 0.982 0.966 0.975 0.949 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
6. F58B3.5 mars-1 6729 7.653 0.946 0.951 0.946 0.951 0.971 0.974 0.962 0.952 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
7. F28H1.3 aars-2 13537 7.652 0.956 0.940 0.961 0.940 0.984 0.975 0.979 0.917 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
8. T08B2.9 fars-1 12650 7.651 0.932 0.960 0.954 0.960 0.957 0.976 0.982 0.930 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
9. K08F11.3 cif-1 10218 7.637 0.966 0.940 0.943 0.940 0.980 0.990 0.976 0.902 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
10. Y34D9A.1 mrpl-38 5291 7.637 0.927 0.949 0.950 0.949 0.964 0.989 0.966 0.943 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
11. C26E6.4 rpb-2 7053 7.635 0.963 0.955 0.937 0.955 0.989 0.966 0.965 0.905 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
12. C56C10.8 icd-1 89788 7.632 0.954 0.948 0.903 0.948 0.972 0.981 0.970 0.956 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
13. H19N07.1 erfa-3 19869 7.632 0.958 0.956 0.963 0.956 0.977 0.984 0.921 0.917 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
14. Y65B4BR.5 icd-2 58321 7.631 0.921 0.963 0.946 0.963 0.958 0.979 0.960 0.941 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
15. F36A4.7 ama-1 13620 7.63 0.953 0.949 0.959 0.949 0.964 0.985 0.923 0.948 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
16. F22B5.9 fars-3 7209 7.629 0.939 0.949 0.940 0.949 0.979 0.958 0.976 0.939 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
17. R144.7 larp-1 24669 7.628 0.936 0.953 0.974 0.953 0.974 0.975 0.958 0.905 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
18. C26D10.2 hel-1 28697 7.625 0.956 0.942 0.930 0.942 0.969 0.980 0.959 0.947 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
19. F42A6.7 hrp-1 28201 7.62 0.954 0.920 0.951 0.920 0.975 0.974 0.986 0.940 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
20. F22D6.3 nars-1 18624 7.619 0.940 0.952 0.934 0.952 0.975 0.985 0.940 0.941 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
21. D2013.7 eif-3.F 21004 7.616 0.940 0.947 0.958 0.947 0.962 0.975 0.947 0.940 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
22. F26F4.10 rars-1 9971 7.615 0.959 0.932 0.964 0.932 0.967 0.984 0.961 0.916 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
23. K01G5.4 ran-1 32379 7.614 0.945 0.935 0.932 0.935 0.984 0.975 0.975 0.933 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
24. T10B5.5 cct-7 24616 7.611 0.950 0.959 0.968 0.959 0.979 0.955 0.953 0.888 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
25. Y40B1B.5 eif-3.J 15061 7.61 0.965 0.934 0.954 0.934 0.961 0.979 0.949 0.934 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
26. W08E3.3 ola-1 20885 7.609 0.960 0.950 0.956 0.950 0.983 0.951 0.973 0.886 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
27. F23F1.1 nfyc-1 9983 7.605 0.953 0.941 0.929 0.941 0.973 0.965 0.969 0.934 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
28. T05H4.6 erfa-1 12542 7.604 0.910 0.955 0.951 0.955 0.959 0.969 0.967 0.938 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
29. C33H5.12 rsp-6 23342 7.603 0.942 0.929 0.946 0.929 0.980 0.971 0.954 0.952 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
30. F56D2.6 ddx-15 12282 7.601 0.957 0.933 0.966 0.933 0.985 0.965 0.957 0.905 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
31. C34E10.5 prmt-5 12277 7.601 0.949 0.943 0.968 0.943 0.968 0.959 0.964 0.907 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
32. R13F6.10 cra-1 11610 7.598 0.961 0.937 0.961 0.937 0.985 0.975 0.933 0.909 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
33. B0464.1 dars-1 12331 7.596 0.935 0.926 0.945 0.926 0.968 0.980 0.976 0.940 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
34. F32E10.6 cec-5 10643 7.595 0.950 0.938 0.965 0.938 0.971 0.946 0.944 0.943 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
35. T11G6.1 hars-1 7908 7.59 0.929 0.963 0.948 0.963 0.970 0.967 0.971 0.879 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
36. T21C9.12 scpl-4 14723 7.589 0.926 0.937 0.944 0.937 0.974 0.971 0.959 0.941 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
37. H21P03.1 mbf-1 25586 7.589 0.927 0.965 0.936 0.965 0.955 0.956 0.949 0.936 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
38. T12D8.2 drr-2 16208 7.588 0.949 0.937 0.982 0.937 0.937 0.979 0.935 0.932 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
39. Y110A7A.19 let-630 3830 7.585 0.964 0.933 0.949 0.933 0.977 0.952 0.952 0.925
40. T23D8.4 eif-3.C 15343 7.581 0.944 0.973 0.957 0.973 0.925 0.982 0.892 0.935 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
41. T02G5.9 kars-1 9763 7.58 0.905 0.947 0.923 0.947 0.986 0.975 0.968 0.929 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
42. M01B12.5 riok-1 6698 7.579 0.922 0.950 0.951 0.950 0.976 0.979 0.932 0.919 Serine/threonine-protein kinase RIO1 [Source:UniProtKB/Swiss-Prot;Acc:O44959]
43. T05C3.5 dnj-19 20420 7.579 0.922 0.958 0.964 0.958 0.962 0.976 0.908 0.931 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
44. F55H2.6 clu-1 21404 7.578 0.921 0.951 0.932 0.951 0.974 0.952 0.955 0.942 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
45. F46A9.4 skr-2 16831 7.578 0.953 0.950 0.964 0.950 0.954 0.947 0.934 0.926 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
46. T25D3.2 mrpl-28 4649 7.577 0.939 0.953 0.957 0.953 0.952 0.946 0.959 0.918 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]
47. F17C11.9 eef-1G 37911 7.575 0.939 0.942 0.898 0.942 0.983 0.969 0.979 0.923 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
48. C18D11.4 rsp-8 18308 7.575 0.943 0.933 0.951 0.933 0.939 0.978 0.945 0.953 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
49. W09C5.7 W09C5.7 2359 7.573 0.934 0.927 0.928 0.927 0.969 0.974 0.965 0.949
50. T06A10.4 lsy-13 7631 7.573 0.939 0.931 0.954 0.931 0.970 0.948 0.953 0.947
51. C09D4.5 rpl-19 56944 7.571 0.922 0.944 0.910 0.944 0.967 0.980 0.972 0.932 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
52. C43E11.1 acin-1 7781 7.568 0.969 0.923 0.957 0.923 0.967 0.961 0.925 0.943 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
53. ZK1098.7 mrps-23 2365 7.567 0.923 0.945 0.935 0.945 0.975 0.980 0.946 0.918 Probable 28S ribosomal protein S23, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34748]
54. F28B3.8 imb-1 7515 7.565 0.943 0.945 0.929 0.945 0.965 0.954 0.963 0.921 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
55. K04D7.1 rack-1 48949 7.564 0.906 0.936 0.925 0.936 0.969 0.968 0.983 0.941 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
56. F53A3.3 rps-22 81093 7.564 0.936 0.931 0.879 0.931 0.962 0.981 0.982 0.962 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
57. F32H2.1 snpc-4 7581 7.563 0.963 0.935 0.948 0.935 0.986 0.960 0.974 0.862 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
58. Y116A8C.42 snr-1 17062 7.563 0.942 0.944 0.957 0.944 0.970 0.952 0.964 0.890 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
59. Y37D8A.18 mrps-10 4551 7.563 0.927 0.940 0.948 0.940 0.960 0.936 0.961 0.951 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
60. Y54E5A.4 npp-4 6288 7.562 0.922 0.919 0.940 0.919 0.984 0.975 0.970 0.933 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
61. Y37E3.15 npp-13 7250 7.562 0.957 0.925 0.925 0.925 0.967 0.960 0.969 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
62. W02B12.3 rsp-1 9235 7.561 0.949 0.910 0.956 0.910 0.981 0.967 0.944 0.944 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
63. F28B3.7 him-1 18274 7.558 0.934 0.949 0.933 0.949 0.947 0.980 0.934 0.932 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
64. W08D2.7 mtr-4 2699 7.556 0.883 0.952 0.937 0.952 0.982 0.977 0.972 0.901 mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
65. T10F2.1 gars-1 7204 7.555 0.953 0.962 0.961 0.962 0.932 0.956 0.855 0.974 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
66. ZC434.5 ears-1 4725 7.555 0.941 0.955 0.913 0.955 0.966 0.971 0.949 0.905 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
67. K08F4.2 gtbp-1 25222 7.554 0.946 0.957 0.958 0.957 0.974 0.929 0.927 0.906 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
68. T17E9.2 nmt-1 8017 7.553 0.907 0.950 0.948 0.950 0.952 0.980 0.960 0.906 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
69. T12D8.8 hip-1 18283 7.553 0.940 0.920 0.946 0.920 0.952 0.985 0.954 0.936 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
70. C25D7.8 otub-1 7941 7.552 0.940 0.945 0.946 0.945 0.976 0.955 0.970 0.875 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
71. Y18D10A.19 fkb-2 48128 7.552 0.938 0.933 0.884 0.933 0.977 0.953 0.973 0.961 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
72. F33D4.5 mrpl-1 5337 7.552 0.924 0.933 0.979 0.933 0.969 0.953 0.959 0.902 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
73. F42A10.1 abcf-3 5557 7.551 0.949 0.942 0.958 0.942 0.978 0.978 0.963 0.841 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
74. Y17G7A.1 hmg-12 29989 7.549 0.944 0.947 0.934 0.947 0.977 0.957 0.970 0.873 HMG [Source:RefSeq peptide;Acc:NP_496544]
75. T10F2.4 prp-19 11298 7.549 0.927 0.935 0.946 0.935 0.974 0.980 0.956 0.896 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
76. F37E3.1 ncbp-1 5649 7.548 0.945 0.919 0.948 0.919 0.960 0.978 0.939 0.940 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
77. Y54E10A.9 vbh-1 28746 7.548 0.933 0.950 0.953 0.950 0.928 0.973 0.919 0.942 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
78. C47D12.6 tars-1 23488 7.547 0.926 0.939 0.960 0.939 0.959 0.982 0.905 0.937 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
79. T22D1.10 ruvb-2 6505 7.547 0.932 0.936 0.966 0.936 0.978 0.953 0.927 0.919 RuvB-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH2]
80. C53D5.6 imb-3 28921 7.547 0.955 0.945 0.956 0.945 0.955 0.956 0.966 0.869 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
81. B0336.9 swp-1 52442 7.547 0.932 0.930 0.911 0.930 0.975 0.976 0.972 0.921 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
82. T24H7.1 phb-2 28775 7.546 0.952 0.937 0.865 0.937 0.989 0.958 0.955 0.953 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
83. C15H11.4 dhs-22 21674 7.546 0.914 0.945 0.959 0.945 0.951 0.963 0.959 0.910 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
84. T28D9.2 rsp-5 6460 7.545 0.944 0.935 0.973 0.935 0.972 0.911 0.977 0.898 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
85. T23H2.1 npp-12 12425 7.544 0.960 0.922 0.945 0.922 0.984 0.955 0.986 0.870 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
86. Y37H2A.5 fbxa-210 2230 7.544 0.894 0.962 0.940 0.962 0.982 0.951 0.958 0.895 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
87. W01G7.3 rpb-11 7826 7.542 0.900 0.927 0.926 0.927 0.971 0.971 0.973 0.947 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
88. Y39G10AR.9 Y39G10AR.9 3972 7.541 0.947 0.924 0.931 0.924 0.953 0.988 0.948 0.926
89. C02B10.5 C02B10.5 9171 7.541 0.918 0.921 0.934 0.921 0.973 0.965 0.974 0.935
90. K04D7.2 mspn-1 48187 7.541 0.931 0.919 0.908 0.919 0.970 0.985 0.979 0.930 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
91. T04A8.11 mrpl-16 5998 7.541 0.920 0.970 0.965 0.970 0.978 0.957 0.933 0.848 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
92. F32E10.4 ima-3 35579 7.54 0.957 0.964 0.942 0.964 0.916 0.957 0.889 0.951 Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
93. R09B3.5 mag-1 7496 7.539 0.946 0.924 0.968 0.924 0.958 0.971 0.967 0.881 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
94. Y23H5B.6 Y23H5B.6 5886 7.539 0.937 0.947 0.936 0.947 0.970 0.938 0.958 0.906
95. T28D9.10 snr-3 9995 7.538 0.943 0.960 0.931 0.960 0.966 0.931 0.932 0.915 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
96. Y39G10AR.7 ekl-7 7072 7.538 0.943 0.916 0.952 0.916 0.986 0.941 0.959 0.925
97. C48B4.11 C48B4.11 4384 7.537 0.941 0.924 0.922 0.924 0.985 0.956 0.966 0.919
98. B0464.2 ctr-9 7610 7.537 0.936 0.930 0.949 0.930 0.977 0.969 0.947 0.899 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
99. F58E10.3 ddx-17 15107 7.537 0.942 0.934 0.954 0.934 0.983 0.927 0.934 0.929 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
100. ZK328.2 eftu-2 7040 7.537 0.939 0.954 0.922 0.954 0.977 0.958 0.955 0.878 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]

There are 1598 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA