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Results for F58A4.9

Gene ID Gene Name Reads Transcripts Annotation
F58A4.9 rpac-19 2692 F58A4.9.1, F58A4.9.2 Probable DNA-directed RNA polymerases I and III subunit RPAC2 [Source:UniProtKB/Swiss-Prot;Acc:P34476]

Genes with expression patterns similar to F58A4.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F58A4.9 rpac-19 2692 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable DNA-directed RNA polymerases I and III subunit RPAC2 [Source:UniProtKB/Swiss-Prot;Acc:P34476]
2. C34E10.2 gop-2 5684 7.657 0.953 0.942 0.940 0.942 0.975 0.966 0.968 0.971 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
3. Y113G7B.17 prmt-1 43709 7.64 0.934 0.952 0.936 0.952 0.990 0.961 0.932 0.983 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
4. D2096.8 nap-1 59459 7.619 0.934 0.943 0.931 0.943 0.987 0.972 0.937 0.972 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
5. T28D9.10 snr-3 9995 7.611 0.963 0.932 0.933 0.932 0.960 0.987 0.941 0.963 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
6. Y49E10.15 snr-6 8505 7.605 0.947 0.928 0.930 0.928 0.955 0.972 0.959 0.986 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
7. C15H11.9 rrbs-1 9177 7.604 0.918 0.924 0.945 0.924 0.986 0.978 0.951 0.978 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
8. Y54E5A.6 Y54E5A.6 770 7.599 0.980 0.910 0.932 0.910 0.972 0.985 0.949 0.961
9. T01C3.7 fib-1 23572 7.588 0.931 0.926 0.947 0.926 0.991 0.973 0.922 0.972 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
10. Y14H12B.2 Y14H12B.2 6496 7.587 0.923 0.940 0.908 0.940 0.993 0.969 0.935 0.979
11. C27H6.3 tofu-1 2992 7.581 0.955 0.913 0.945 0.913 0.978 0.980 0.963 0.934 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
12. D2023.5 mpst-1 10328 7.576 0.946 0.932 0.936 0.932 0.953 0.966 0.943 0.968 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
13. Y54H5A.2 Y54H5A.2 2168 7.575 0.927 0.918 0.936 0.918 0.987 0.973 0.938 0.978
14. Y116A8C.42 snr-1 17062 7.573 0.963 0.929 0.913 0.929 0.968 0.989 0.947 0.935 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
15. T23G11.3 gld-1 41748 7.569 0.940 0.935 0.919 0.935 0.974 0.958 0.938 0.970 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
16. F10G7.1 tag-151 9031 7.556 0.906 0.910 0.931 0.910 0.983 0.991 0.976 0.949 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
17. W06H3.3 ctps-1 8363 7.553 0.968 0.908 0.924 0.908 0.948 0.983 0.945 0.969 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
18. Y53C12B.3 nos-3 20231 7.553 0.941 0.925 0.923 0.925 0.956 0.967 0.935 0.981 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
19. C25A1.10 dao-5 18351 7.546 0.890 0.927 0.916 0.927 0.990 0.985 0.946 0.965 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
20. K08F4.2 gtbp-1 25222 7.545 0.947 0.909 0.917 0.909 0.960 0.975 0.963 0.965 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
21. T03D8.2 mrps-12 8253 7.543 0.911 0.931 0.944 0.931 0.979 0.970 0.937 0.940 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
22. T28D9.2 rsp-5 6460 7.54 0.931 0.937 0.931 0.937 0.968 0.972 0.914 0.950 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
23. T23F6.4 rbd-1 5825 7.539 0.809 0.943 0.951 0.943 0.976 0.982 0.954 0.981 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
24. C06A1.5 rpb-6 7515 7.528 0.956 0.912 0.937 0.912 0.949 0.971 0.923 0.968 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
25. Y37D8A.11 cec-7 8801 7.526 0.928 0.924 0.931 0.924 0.980 0.975 0.932 0.932 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
26. Y71F9B.4 snr-7 13542 7.525 0.970 0.905 0.910 0.905 0.973 0.975 0.934 0.953 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
27. C05D11.10 mrps-17 4613 7.525 0.962 0.929 0.917 0.929 0.931 0.956 0.924 0.977 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
28. Y37E3.3 rpb-10 4051 7.524 0.960 0.936 0.870 0.936 0.952 0.982 0.940 0.948 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
29. H27M09.2 rpb-5 4744 7.524 0.946 0.915 0.920 0.915 0.986 0.964 0.943 0.935 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
30. Y23H5B.6 Y23H5B.6 5886 7.522 0.931 0.918 0.942 0.918 0.969 0.972 0.913 0.959
31. C34D4.12 cyn-12 7363 7.519 0.904 0.902 0.914 0.902 0.978 0.976 0.979 0.964 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
32. F26F4.11 rpb-8 7601 7.518 0.949 0.891 0.929 0.891 0.951 0.976 0.957 0.974 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
33. C49H3.10 xpo-3 9101 7.516 0.904 0.939 0.935 0.939 0.959 0.963 0.945 0.932 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
34. T19A6.2 ngp-1 5884 7.513 0.897 0.929 0.942 0.929 0.966 0.952 0.931 0.967 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
35. C49H3.4 C49H3.4 648 7.513 0.960 0.886 0.930 0.886 0.951 0.973 0.957 0.970
36. C16A3.3 let-716 8448 7.513 0.833 0.936 0.931 0.936 0.994 0.985 0.946 0.952
37. C03D6.8 rpl-24.2 5932 7.51 0.932 0.934 0.869 0.934 0.955 0.980 0.934 0.972 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
38. W08E3.1 snr-2 14849 7.51 0.938 0.914 0.932 0.914 0.916 0.982 0.952 0.962 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
39. Y39E4B.2 snpc-1.2 5800 7.508 0.905 0.903 0.888 0.903 0.991 0.975 0.958 0.985 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
40. B0513.2 B0513.2 3641 7.508 0.894 0.920 0.936 0.920 0.982 0.963 0.960 0.933
41. W01B11.3 nol-5 23544 7.506 0.869 0.959 0.920 0.959 0.976 0.915 0.948 0.960 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
42. H20J04.8 mog-2 3084 7.506 0.972 0.910 0.890 0.910 0.953 0.969 0.957 0.945 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
43. B0414.3 hil-5 10816 7.502 0.904 0.922 0.933 0.922 0.968 0.977 0.923 0.953 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
44. K09H9.6 lpd-6 5459 7.498 0.941 0.916 0.925 0.916 0.992 0.963 0.928 0.917 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
45. Y55F3AR.3 cct-8 17979 7.497 0.974 0.929 0.946 0.929 0.941 0.964 0.929 0.885 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
46. T21B10.7 cct-2 13999 7.495 0.941 0.935 0.903 0.935 0.958 0.955 0.958 0.910 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
47. K12C11.2 smo-1 12784 7.494 0.931 0.933 0.928 0.933 0.939 0.950 0.913 0.967 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
48. Y40G12A.1 ubh-3 4142 7.493 0.937 0.921 0.918 0.921 0.932 0.968 0.932 0.964 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
49. K01G5.2 hpl-2 6781 7.493 0.952 0.930 0.927 0.930 0.945 0.965 0.884 0.960 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
50. Y37D8A.18 mrps-10 4551 7.493 0.966 0.936 0.939 0.936 0.930 0.969 0.939 0.878 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
51. F53F4.12 F53F4.12 2683 7.492 0.946 0.892 0.921 0.892 0.972 0.974 0.937 0.958
52. Y48B6A.3 xrn-2 4881 7.492 0.926 0.888 0.925 0.888 0.996 0.968 0.923 0.978 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
53. C07H6.5 cgh-1 60576 7.491 0.906 0.927 0.912 0.927 0.966 0.957 0.951 0.945 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
54. F14B4.3 rpoa-2 7549 7.491 0.857 0.934 0.938 0.934 0.983 0.983 0.921 0.941 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
55. Y62E10A.12 lsm-3 4322 7.491 0.941 0.869 0.948 0.869 0.972 0.981 0.968 0.943 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
56. C48B4.7 C48B4.7 4006 7.49 0.972 0.876 0.940 0.876 0.956 0.950 0.952 0.968
57. B0024.13 B0024.13 4311 7.49 0.916 0.893 0.950 0.893 0.981 0.973 0.945 0.939 Polyprenol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17428]
58. C27H6.2 ruvb-1 6291 7.489 0.916 0.916 0.923 0.916 0.961 0.967 0.955 0.935 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
59. R13A5.12 lpd-7 10476 7.489 0.912 0.903 0.906 0.903 0.964 0.978 0.937 0.986 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
60. ZK945.3 puf-12 6266 7.485 0.723 0.945 0.938 0.945 0.988 0.980 0.977 0.989 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
61. M01E11.5 cey-3 20931 7.485 0.920 0.912 0.924 0.912 0.974 0.952 0.954 0.937 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
62. F21C3.4 rde-2 6286 7.482 0.953 0.910 0.941 0.910 0.963 0.978 0.895 0.932
63. C34E10.11 mrps-26 4649 7.482 0.971 0.923 0.922 0.923 0.973 0.954 0.903 0.913 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
64. Y73B6BL.32 lsm-8 11002 7.481 0.945 0.926 0.938 0.926 0.963 0.941 0.891 0.951 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
65. Y105E8B.3 riok-2 5531 7.479 0.898 0.928 0.953 0.928 0.975 0.967 0.904 0.926 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
66. C48B4.11 C48B4.11 4384 7.479 0.942 0.914 0.915 0.914 0.934 0.962 0.928 0.970
67. C26B2.6 elpc-4 3600 7.477 0.908 0.915 0.915 0.915 0.964 0.967 0.957 0.936 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
68. W06E11.4 sbds-1 6701 7.477 0.941 0.916 0.916 0.916 0.956 0.978 0.937 0.917 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
69. K04C2.3 K04C2.3 23540 7.477 0.919 0.865 0.953 0.865 0.975 0.967 0.950 0.983
70. C08F8.1 pfd-1 10199 7.477 0.947 0.939 0.943 0.939 0.964 0.949 0.903 0.893 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
71. F59A2.3 cri-3 15077 7.47 0.951 0.915 0.888 0.915 0.915 0.982 0.952 0.952 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
72. F56D1.3 mrps-16 2309 7.469 0.961 0.941 0.924 0.941 0.967 0.951 0.852 0.932 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
73. F56D12.5 vig-1 42594 7.466 0.963 0.924 0.919 0.924 0.921 0.971 0.898 0.946 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
74. T21B10.1 mrpl-50 14595 7.466 0.939 0.931 0.927 0.931 0.923 0.962 0.949 0.904 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
75. C26D10.1 ran-3 11111 7.464 0.913 0.924 0.937 0.924 0.919 0.993 0.906 0.948 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
76. Y53C12B.2 Y53C12B.2 6115 7.463 0.942 0.896 0.939 0.896 0.985 0.937 0.962 0.906 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
77. ZK652.1 snr-5 5993 7.462 0.963 0.927 0.897 0.927 0.902 0.957 0.932 0.957 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
78. F18A1.8 pid-1 3751 7.462 0.941 0.890 0.930 0.890 0.985 0.983 0.897 0.946 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
79. F43C1.6 mrpl-21 2778 7.46 0.954 0.908 0.890 0.908 0.928 0.949 0.987 0.936 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
80. C26E6.4 rpb-2 7053 7.459 0.938 0.925 0.899 0.925 0.935 0.964 0.899 0.974 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
81. C01F6.8 icln-1 6586 7.458 0.936 0.901 0.932 0.901 0.963 0.983 0.934 0.908 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
82. F20A1.9 tofu-2 3341 7.455 0.899 0.938 0.944 0.938 0.971 0.956 0.890 0.919 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
83. Y40B1B.8 Y40B1B.8 4877 7.455 0.969 0.848 0.951 0.848 0.970 0.974 0.948 0.947
84. F41G3.14 exos-8 2300 7.454 0.916 0.929 0.860 0.929 0.981 0.986 0.904 0.949 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
85. R09B3.1 exo-3 4401 7.453 0.951 0.895 0.913 0.895 0.967 0.941 0.945 0.946 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
86. F59A2.1 npp-9 34375 7.453 0.930 0.880 0.910 0.880 0.982 0.980 0.937 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
87. C07E3.2 pro-2 4193 7.452 0.894 0.900 0.920 0.900 0.982 0.978 0.905 0.973 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
88. B0035.12 sart-3 7188 7.451 0.949 0.927 0.933 0.927 0.979 0.960 0.864 0.912 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
89. K01G5.4 ran-1 32379 7.451 0.932 0.935 0.916 0.935 0.924 0.968 0.897 0.944 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
90. H43I07.2 rpac-40 3342 7.448 0.936 0.886 0.955 0.886 0.942 0.951 0.942 0.950 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
91. Y37E3.15 npp-13 7250 7.447 0.925 0.911 0.940 0.911 0.954 0.955 0.903 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
92. T14B4.3 T14B4.3 2875 7.447 0.937 0.920 0.928 0.920 0.924 0.951 0.891 0.976
93. T10G3.6 gut-2 3374 7.445 0.916 0.927 0.919 0.927 0.968 0.968 0.890 0.930
94. Y55F3AM.12 dcap-1 8679 7.442 0.921 0.897 0.897 0.897 0.974 0.972 0.951 0.933 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
95. F52F12.4 lsl-1 4055 7.442 0.898 0.890 0.921 0.890 0.993 0.970 0.912 0.968 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
96. F53A2.4 nud-1 7818 7.44 0.941 0.864 0.946 0.864 0.978 0.969 0.965 0.913 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
97. T13H5.5 mrps-18B 3430 7.44 0.963 0.906 0.883 0.906 0.955 0.973 0.918 0.936 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
98. F55H2.6 clu-1 21404 7.439 0.916 0.915 0.914 0.915 0.954 0.977 0.912 0.936 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
99. R07E5.14 rnp-4 11659 7.438 0.933 0.893 0.892 0.893 0.957 0.968 0.945 0.957 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
100. C17G10.2 C17G10.2 2288 7.436 0.938 0.924 0.918 0.924 0.936 0.929 0.910 0.957

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA