C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for W01B11.3

Gene ID Gene Name Reads Transcripts Annotation
W01B11.3 nol-5 23544 W01B11.3.1, W01B11.3.2 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]

Genes with expression patterns similar to W01B11.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. W01B11.3 nol-5 23544 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
2. Y113G7B.17 prmt-1 43709 7.896 0.973 0.991 0.980 0.991 0.985 0.990 0.994 0.992 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
3. T01C3.7 fib-1 23572 7.832 0.965 0.977 0.966 0.977 0.990 0.974 0.993 0.990 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
4. D2096.8 nap-1 59459 7.794 0.946 0.989 0.982 0.989 0.978 0.959 0.986 0.965 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
5. C16A3.3 let-716 8448 7.79 0.962 0.982 0.979 0.982 0.982 0.955 0.978 0.970
6. W07E6.1 nol-1 7892 7.79 0.950 0.975 0.980 0.975 0.985 0.960 0.979 0.986 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
7. C25A1.10 dao-5 18351 7.777 0.953 0.983 0.978 0.983 0.981 0.942 0.978 0.979 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
8. ZK945.3 puf-12 6266 7.742 0.939 0.980 0.970 0.980 0.994 0.940 0.983 0.956 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
9. T21G5.3 glh-1 16470 7.711 0.962 0.973 0.975 0.973 0.978 0.950 0.949 0.951 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
10. T23F6.4 rbd-1 5825 7.701 0.965 0.980 0.944 0.980 0.953 0.926 0.963 0.990 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
11. T07A9.9 nog-1 19728 7.693 0.976 0.988 0.980 0.988 0.961 0.930 0.922 0.948 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
12. C15H11.9 rrbs-1 9177 7.677 0.948 0.974 0.985 0.974 0.964 0.865 0.993 0.974 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
13. C03D6.8 rpl-24.2 5932 7.677 0.951 0.972 0.946 0.972 0.957 0.928 0.982 0.969 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
14. Y18D10A.19 fkb-2 48128 7.666 0.939 0.975 0.971 0.975 0.963 0.966 0.920 0.957 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
15. T05G5.10 iff-1 42569 7.658 0.931 0.971 0.943 0.971 0.950 0.970 0.954 0.968 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
16. C27H6.2 ruvb-1 6291 7.654 0.939 0.957 0.928 0.957 0.950 0.967 0.978 0.978 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
17. T19A6.2 ngp-1 5884 7.653 0.920 0.965 0.955 0.965 0.979 0.948 0.966 0.955 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
18. Y71G12B.8 ddx-27 3584 7.647 0.910 0.943 0.951 0.943 0.992 0.969 0.982 0.957 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
19. F56D12.5 vig-1 42594 7.635 0.918 0.967 0.984 0.967 0.950 0.948 0.950 0.951 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
20. F55H2.6 clu-1 21404 7.634 0.938 0.969 0.966 0.969 0.973 0.916 0.968 0.935 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
21. F10G7.1 tag-151 9031 7.633 0.947 0.955 0.977 0.955 0.974 0.936 0.965 0.924 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
22. F21H12.5 fbf-2 4640 7.613 0.902 0.956 0.945 0.956 0.976 0.944 0.975 0.959 Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09312]
23. Y48B6A.3 xrn-2 4881 7.612 0.921 0.950 0.979 0.950 0.980 0.878 0.986 0.968 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
24. C01G8.6 hpo-32 7439 7.611 0.952 0.957 0.970 0.957 0.949 0.901 0.981 0.944
25. C56C10.8 icd-1 89788 7.6 0.918 0.972 0.974 0.972 0.955 0.921 0.960 0.928 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
26. C07E3.2 pro-2 4193 7.594 0.947 0.942 0.930 0.942 0.977 0.941 0.981 0.934 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
27. K07C5.6 K07C5.6 7375 7.594 0.977 0.856 0.985 0.856 0.989 0.965 0.978 0.988 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
28. Y53C12B.3 nos-3 20231 7.582 0.928 0.948 0.927 0.948 0.954 0.935 0.976 0.966 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
29. R13A5.12 lpd-7 10476 7.578 0.901 0.952 0.959 0.952 0.980 0.887 0.984 0.963 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
30. T03D8.2 mrps-12 8253 7.574 0.902 0.974 0.969 0.974 0.977 0.880 0.977 0.921 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
31. F55F8.3 F55F8.3 2107 7.562 0.943 0.926 0.918 0.926 0.970 0.974 0.955 0.950 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
32. Y37D8A.11 cec-7 8801 7.561 0.921 0.944 0.928 0.944 0.986 0.937 0.994 0.907 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
33. K08F4.2 gtbp-1 25222 7.56 0.889 0.952 0.936 0.952 0.966 0.928 0.980 0.957 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
34. T22D1.10 ruvb-2 6505 7.559 0.936 0.947 0.950 0.947 0.964 0.952 0.925 0.938 RuvB-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH2]
35. K07F5.15 K07F5.15 10171 7.554 0.946 0.947 0.926 0.947 0.957 0.949 0.923 0.959
36. Y54H5A.2 Y54H5A.2 2168 7.55 0.933 0.940 0.959 0.940 0.975 0.857 0.978 0.968
37. Y110A7A.18 ppw-2 12570 7.55 0.928 0.957 0.958 0.957 0.958 0.975 0.883 0.934 Piwi-like protein [Source:RefSeq peptide;Acc:NP_491535]
38. K01G5.8 K01G5.8 4694 7.546 0.950 0.876 0.953 0.876 0.983 0.924 0.990 0.994
39. Y75B12B.2 cyn-7 98281 7.544 0.929 0.976 0.966 0.976 0.911 0.893 0.964 0.929 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
40. R144.7 larp-1 24669 7.539 0.953 0.970 0.959 0.970 0.943 0.921 0.885 0.938 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
41. F55A12.8 nath-10 4253 7.537 0.882 0.955 0.944 0.955 0.975 0.921 0.975 0.930 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
42. R166.4 pro-1 2701 7.535 0.877 0.930 0.934 0.930 0.965 0.939 0.986 0.974 Pre-rRNA-processing protein pro-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22006]
43. Y71H2AM.23 tufm-1 16206 7.534 0.946 0.953 0.961 0.953 0.955 0.912 0.919 0.935 TU elongation Factor (EF-Tu), Mitochondrial [Source:RefSeq peptide;Acc:NP_497623]
44. Y116A8C.42 snr-1 17062 7.534 0.902 0.952 0.942 0.952 0.962 0.923 0.983 0.918 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
45. F09F7.3 rpc-2 9751 7.528 0.941 0.945 0.945 0.945 0.977 0.933 0.980 0.862 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
46. F14B4.3 rpoa-2 7549 7.526 0.922 0.959 0.882 0.959 0.974 0.918 0.988 0.924 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
47. C53D5.6 imb-3 28921 7.525 0.909 0.964 0.953 0.964 0.929 0.927 0.929 0.950 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
48. R13F6.10 cra-1 11610 7.525 0.947 0.949 0.955 0.949 0.946 0.927 0.917 0.935 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
49. T28D9.10 snr-3 9995 7.524 0.864 0.958 0.969 0.958 0.956 0.900 0.972 0.947 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
50. H12I13.4 fbf-1 5587 7.524 0.905 0.956 0.904 0.956 0.959 0.952 0.910 0.982 Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
51. B0414.3 hil-5 10816 7.524 0.811 0.930 0.934 0.930 0.984 0.957 0.986 0.992 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
52. F18C5.3 tag-184 4027 7.519 0.928 0.962 0.931 0.962 0.950 0.913 0.983 0.890
53. F52B5.6 rpl-25.2 100512 7.518 0.955 0.962 0.958 0.962 0.838 0.981 0.919 0.943 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
54. F59A2.3 cri-3 15077 7.513 0.873 0.978 0.951 0.978 0.926 0.891 0.960 0.956 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
55. T21C9.12 scpl-4 14723 7.513 0.907 0.962 0.979 0.962 0.945 0.907 0.886 0.965 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
56. Y23H5B.6 Y23H5B.6 5886 7.511 0.888 0.956 0.890 0.956 0.983 0.910 0.950 0.978
57. ZC434.5 ears-1 4725 7.51 0.875 0.956 0.939 0.956 0.938 0.935 0.963 0.948 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
58. K01C8.9 nst-1 4587 7.509 0.952 0.931 0.895 0.931 0.979 0.945 0.911 0.965 Guanine nucleotide-binding protein-like 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21086]
59. F20A1.9 tofu-2 3341 7.508 0.891 0.961 0.925 0.961 0.967 0.913 0.963 0.927 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
60. C26E6.4 rpb-2 7053 7.507 0.904 0.956 0.940 0.956 0.974 0.891 0.945 0.941 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
61. F58A4.9 rpac-19 2692 7.506 0.869 0.959 0.920 0.959 0.976 0.915 0.948 0.960 Probable DNA-directed RNA polymerases I and III subunit RPAC2 [Source:UniProtKB/Swiss-Prot;Acc:P34476]
62. Y111B2A.2 Y111B2A.2 21569 7.498 0.916 0.974 0.964 0.974 0.944 0.879 0.937 0.910
63. Y105E8B.3 riok-2 5531 7.494 0.960 0.958 0.912 0.958 0.949 0.930 0.894 0.933 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
64. C06A1.5 rpb-6 7515 7.491 0.881 0.960 0.931 0.960 0.944 0.872 0.978 0.965 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
65. B0513.2 B0513.2 3641 7.49 0.855 0.933 0.945 0.933 0.968 0.884 0.992 0.980
66. Y54E5A.6 Y54E5A.6 770 7.49 0.920 0.921 0.946 0.921 0.974 0.890 0.961 0.957
67. K08F11.3 cif-1 10218 7.488 0.899 0.965 0.959 0.965 0.952 0.894 0.914 0.940 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
68. C06E7.1 sams-3 26921 7.487 0.925 0.960 0.941 0.960 0.922 0.934 0.906 0.939 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
69. T24H7.1 phb-2 28775 7.485 0.916 0.951 0.959 0.951 0.968 0.842 0.972 0.926 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
70. T22F3.4 rpl-11.1 68403 7.484 0.954 0.968 0.968 0.968 0.953 0.745 0.949 0.979 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
71. M01F1.2 rpl-16 99563 7.483 0.930 0.949 0.917 0.949 0.962 0.960 0.938 0.878 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
72. K04C2.3 K04C2.3 23540 7.481 0.971 0.860 0.963 0.860 0.983 0.902 0.973 0.969
73. C14A4.4 crn-3 6558 7.48 0.943 0.944 0.944 0.944 0.889 0.946 0.918 0.952 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
74. T06A10.1 mel-46 4407 7.479 0.951 0.940 0.962 0.940 0.954 0.900 0.925 0.907 MEL-46; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED26]
75. Y37E3.7 rla-1 55876 7.477 0.921 0.950 0.954 0.950 0.954 0.925 0.924 0.899 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
76. F25H5.4 eef-2 34846 7.476 0.882 0.948 0.943 0.948 0.961 0.916 0.953 0.925 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
77. F58D5.1 hrp-2 17211 7.475 0.898 0.960 0.937 0.960 0.930 0.914 0.942 0.934 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
78. F17C11.9 eef-1G 37911 7.475 0.927 0.964 0.965 0.964 0.947 0.912 0.917 0.879 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
79. Y22D7AL.5 hsp-60 42542 7.474 0.923 0.942 0.925 0.942 0.970 0.903 0.953 0.916 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
80. Y18D10A.1 attf-6 6942 7.473 0.909 0.957 0.925 0.957 0.953 0.906 0.939 0.927 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
81. F56D2.6 ddx-15 12282 7.47 0.939 0.930 0.906 0.930 0.967 0.933 0.909 0.956 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
82. F25H2.10 rla-0 79986 7.462 0.907 0.948 0.962 0.948 0.915 0.948 0.932 0.902 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
83. R13A5.8 rpl-9 140064 7.461 0.928 0.940 0.932 0.940 0.960 0.956 0.919 0.886 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
84. Y65B4BR.5 icd-2 58321 7.46 0.908 0.968 0.966 0.968 0.942 0.897 0.879 0.932 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
85. Y46G5A.4 snrp-200 13827 7.458 0.900 0.936 0.929 0.936 0.972 0.929 0.924 0.932 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
86. JC8.3 rpl-12 52728 7.458 0.905 0.961 0.958 0.961 0.947 0.892 0.940 0.894 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
87. C32E8.2 rpl-13 70096 7.453 0.918 0.965 0.953 0.965 0.945 0.881 0.925 0.901 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
88. T05E11.1 rps-5 79298 7.45 0.926 0.949 0.954 0.949 0.941 0.891 0.939 0.901 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
89. Y18D10A.25 fkb-8 8968 7.449 0.887 0.974 0.952 0.974 0.929 0.838 0.912 0.983 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
90. Y50D7A.9 taco-1 5949 7.449 0.872 0.934 0.955 0.934 0.951 0.864 0.984 0.955 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
91. K09H9.6 lpd-6 5459 7.448 0.939 0.958 0.924 0.958 0.969 0.841 0.987 0.872 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
92. C27H6.3 tofu-1 2992 7.445 0.901 0.939 0.952 0.939 0.958 0.878 0.982 0.896 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
93. Y37E3.10 Y37E3.10 6492 7.442 0.904 0.920 0.948 0.920 0.968 0.959 0.948 0.875
94. C14A4.14 mrps-22 7966 7.441 0.901 0.941 0.935 0.941 0.937 0.852 0.972 0.962 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
95. ZK430.1 toe-1 2458 7.44 0.926 0.959 0.864 0.959 0.963 0.884 0.935 0.950 HEAT repeat-containing protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23495]
96. R151.3 rpl-6 89081 7.438 0.923 0.946 0.935 0.946 0.943 0.963 0.922 0.860 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
97. C26D10.2 hel-1 28697 7.437 0.892 0.964 0.946 0.964 0.937 0.883 0.889 0.962 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
98. F45E4.9 hmg-5 2061 7.437 0.886 0.916 0.929 0.916 0.951 0.954 0.963 0.922 HMG [Source:RefSeq peptide;Acc:NP_501245]
99. K04D7.1 rack-1 48949 7.435 0.909 0.961 0.967 0.961 0.947 0.875 0.930 0.885 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
100. B0035.12 sart-3 7188 7.434 0.912 0.944 0.939 0.944 0.966 0.895 0.961 0.873 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]

There are 1067 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA