C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F57C2.1

Gene ID Gene Name Reads Transcripts Annotation
F57C2.1 btb-20 520 F57C2.1 BTB (Broad/complex/Tramtrack/Bric a brac) domain protein [Source:RefSeq peptide;Acc:NP_497016]

Genes with expression patterns similar to F57C2.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F57C2.1 btb-20 520 6 1.000 1.000 1.000 1.000 1.000 1.000 - - BTB (Broad/complex/Tramtrack/Bric a brac) domain protein [Source:RefSeq peptide;Acc:NP_497016]
2. ZK1127.5 ZK1127.5 990 5.48 0.895 0.865 0.939 0.865 0.941 0.975 - - Probable RNA 3'-terminal phosphate cyclase-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q23400]
3. C14A4.5 crn-5 1759 5.434 0.872 0.876 0.879 0.876 0.983 0.948 - - Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
4. ZK1128.6 ttll-4 6059 5.429 0.842 0.870 0.889 0.870 0.980 0.978 - - Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
5. F10G7.1 tag-151 9031 5.415 0.886 0.865 0.851 0.865 0.984 0.964 - - Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
6. Y53C12B.2 Y53C12B.2 6115 5.413 0.880 0.887 0.822 0.887 0.967 0.970 - - RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
7. B0513.2 B0513.2 3641 5.409 0.830 0.912 0.805 0.912 0.969 0.981 - -
8. C27H6.3 tofu-1 2992 5.404 0.877 0.892 0.787 0.892 0.973 0.983 - - Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
9. Y77E11A.6 rpc-11 2203 5.401 0.896 0.901 0.753 0.901 0.969 0.981 - - DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_500076]
10. Y39E4B.2 snpc-1.2 5800 5.399 0.827 0.885 0.881 0.885 0.959 0.962 - - SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
11. ZK829.6 tgt-1 1200 5.391 0.873 0.886 0.856 0.886 0.951 0.939 - - Probable queuine tRNA-ribosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q23623]
12. F09F7.3 rpc-2 9751 5.391 0.848 0.862 0.868 0.862 0.972 0.979 - - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
13. Y37D8A.11 cec-7 8801 5.391 0.832 0.866 0.876 0.866 0.968 0.983 - - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
14. T10G3.6 gut-2 3374 5.389 0.890 0.861 0.828 0.861 0.980 0.969 - -
15. F53F4.12 F53F4.12 2683 5.387 0.886 0.852 0.842 0.852 0.965 0.990 - -
16. Y116A8C.42 snr-1 17062 5.382 0.860 0.861 0.873 0.861 0.972 0.955 - - Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
17. C15H11.6 nxf-2 1545 5.379 0.889 0.864 0.866 0.864 0.935 0.961 - - Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]
18. C34E10.2 gop-2 5684 5.372 0.851 0.870 0.827 0.870 0.985 0.969 - - GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
19. ZC434.7 ZC434.7 2308 5.368 0.824 0.882 0.816 0.882 0.979 0.985 - -
20. K08F4.2 gtbp-1 25222 5.368 0.830 0.877 0.863 0.877 0.968 0.953 - - ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
21. Y54E5A.6 Y54E5A.6 770 5.368 0.896 0.837 0.878 0.837 0.964 0.956 - -
22. Y71F9AM.5 nxt-1 5223 5.365 0.813 0.913 0.895 0.913 0.961 0.870 - - NTF2-related export protein [Source:UniProtKB/Swiss-Prot;Acc:Q9U757]
23. Y40G12A.1 ubh-3 4142 5.363 0.851 0.878 0.835 0.878 0.973 0.948 - - Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
24. T28D9.10 snr-3 9995 5.362 0.857 0.874 0.805 0.874 0.978 0.974 - - Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
25. C23G10.8 C23G10.8 4642 5.362 0.870 0.862 0.879 0.862 0.963 0.926 - -
26. B0414.5 cpb-3 11584 5.358 0.832 0.853 0.884 0.853 0.977 0.959 - - Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
27. C27H6.2 ruvb-1 6291 5.358 0.893 0.848 0.841 0.848 0.978 0.950 - - RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
28. F53F10.5 npp-11 3378 5.355 0.843 0.874 0.853 0.874 0.931 0.980 - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
29. F56D1.3 mrps-16 2309 5.351 0.838 0.851 0.861 0.851 0.965 0.985 - - Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
30. Y95D11A.3 Y95D11A.3 1480 5.349 0.808 0.882 0.808 0.882 0.984 0.985 - -
31. T01E8.6 mrps-14 9328 5.347 0.865 0.881 0.837 0.881 0.933 0.950 - - Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
32. F18A1.8 pid-1 3751 5.346 0.839 0.897 0.762 0.897 0.973 0.978 - - 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
33. C42C1.10 hpo-12 3861 5.345 0.863 0.879 0.886 0.879 0.959 0.879 - -
34. Y47D3A.26 smc-3 6256 5.342 0.808 0.866 0.860 0.866 0.975 0.967 - - Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
35. E02H1.3 tag-124 2189 5.338 0.809 0.871 0.843 0.871 0.986 0.958 - - Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
36. D2023.5 mpst-1 10328 5.338 0.877 0.837 0.839 0.837 0.979 0.969 - - Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
37. T28D9.2 rsp-5 6460 5.336 0.804 0.859 0.863 0.859 0.972 0.979 - - Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
38. C09G5.2 dph-2 2159 5.336 0.800 0.895 0.872 0.895 0.951 0.923 - - Diphthamide biosynthesis protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09454]
39. F54B3.3 atad-3 9583 5.335 0.866 0.866 0.809 0.866 0.951 0.977 - - ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
40. F53A2.4 nud-1 7818 5.332 0.879 0.843 0.805 0.843 0.981 0.981 - - Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
41. Y73B6BL.3 exos-2 2624 5.33 0.841 0.873 0.844 0.873 0.968 0.931 - - EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
42. Y37D8A.9 mrg-1 14369 5.33 0.772 0.866 0.875 0.866 0.985 0.966 - - human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
43. Y53C12B.3 nos-3 20231 5.33 0.838 0.866 0.886 0.866 0.954 0.920 - - NanOS related [Source:RefSeq peptide;Acc:NP_496101]
44. F10E7.6 F10E7.6 2788 5.33 0.850 0.816 0.933 0.816 0.942 0.973 - -
45. C34D4.12 cyn-12 7363 5.329 0.807 0.863 0.846 0.863 0.983 0.967 - - CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
46. F41H10.10 htp-1 6425 5.329 0.844 0.884 0.819 0.884 0.964 0.934 - - Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
47. D2007.4 mrpl-18 2880 5.327 0.848 0.870 0.841 0.870 0.931 0.967 - - 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
48. F14B4.3 rpoa-2 7549 5.327 0.799 0.872 0.837 0.872 0.974 0.973 - - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
49. K04C2.3 K04C2.3 23540 5.326 0.834 0.848 0.857 0.848 0.964 0.975 - -
50. Y37E3.3 rpb-10 4051 5.325 0.854 0.855 0.848 0.855 0.972 0.941 - - DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
51. Y71F9B.4 snr-7 13542 5.324 0.883 0.847 0.806 0.847 0.989 0.952 - - Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
52. T23B12.2 mrpl-4 3820 5.323 0.873 0.851 0.826 0.851 0.961 0.961 - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_505181]
53. K09H9.6 lpd-6 5459 5.32 0.805 0.838 0.876 0.838 0.975 0.988 - - LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
54. Y62E10A.12 lsm-3 4322 5.32 0.874 0.845 0.815 0.845 0.975 0.966 - - LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
55. K11H3.6 mrpl-36 7328 5.319 0.876 0.835 0.863 0.835 0.966 0.944 - - Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
56. C06A1.5 rpb-6 7515 5.315 0.824 0.881 0.777 0.881 0.973 0.979 - - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
57. B0035.12 sart-3 7188 5.315 0.843 0.860 0.838 0.860 0.974 0.940 - - human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
58. R07E5.14 rnp-4 11659 5.314 0.836 0.861 0.849 0.861 0.977 0.930 - - RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
59. T20B12.1 trd-1 2860 5.312 0.822 0.871 0.826 0.871 0.966 0.956 - - Tetratricopeptide repeat-containing protein trd-1 [Source:UniProtKB/Swiss-Prot;Acc:P41842]
60. Y54H5A.2 Y54H5A.2 2168 5.31 0.873 0.819 0.837 0.819 0.982 0.980 - -
61. T25G3.4 T25G3.4 9394 5.309 0.847 0.853 0.849 0.853 0.977 0.930 - - Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
62. F33D4.5 mrpl-1 5337 5.308 0.900 0.853 0.816 0.853 0.969 0.917 - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
63. Y23H5B.6 Y23H5B.6 5886 5.308 0.829 0.885 0.804 0.885 0.946 0.959 - -
64. C01F6.8 icln-1 6586 5.308 0.871 0.820 0.878 0.820 0.967 0.952 - - ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
65. W08E3.1 snr-2 14849 5.307 0.871 0.827 0.841 0.827 0.976 0.965 - - Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
66. C04G2.6 dis-3 5048 5.306 0.790 0.862 0.830 0.862 0.985 0.977 - - Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
67. W06H3.3 ctps-1 8363 5.306 0.863 0.840 0.843 0.840 0.964 0.956 - - CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
68. Y92H12BR.8 mrpl-15 6344 5.305 0.855 0.839 0.864 0.839 0.974 0.934 - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
69. T07D4.4 ddx-19 7234 5.304 0.862 0.851 0.823 0.851 0.957 0.960 - - DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
70. F45E4.9 hmg-5 2061 5.303 0.803 0.867 0.836 0.867 0.987 0.943 - - HMG [Source:RefSeq peptide;Acc:NP_501245]
71. F26F4.11 rpb-8 7601 5.302 0.864 0.857 0.792 0.857 0.969 0.963 - - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
72. ZK938.7 rnh-1.2 1269 5.302 0.785 0.845 0.889 0.845 0.950 0.988 - - RNase H [Source:RefSeq peptide;Acc:NP_496121]
73. Y92H12BR.6 set-29 2455 5.301 0.853 0.880 0.824 0.880 0.958 0.906 - - SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_490849]
74. E02H1.2 E02H1.2 2194 5.3 0.798 0.861 0.838 0.861 0.969 0.973 - - Uncharacterized GTP-binding protein E02H1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09523]
75. H12I13.4 fbf-1 5587 5.299 0.879 0.854 0.805 0.854 0.978 0.929 - - Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
76. T21B10.1 mrpl-50 14595 5.298 0.807 0.878 0.837 0.878 0.955 0.943 - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
77. T23G11.3 gld-1 41748 5.296 0.823 0.844 0.836 0.844 0.971 0.978 - - Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
78. T21B10.7 cct-2 13999 5.296 0.831 0.845 0.868 0.845 0.969 0.938 - - T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
79. F35G12.12 F35G12.12 5761 5.295 0.844 0.844 0.863 0.844 0.956 0.944 - -
80. C46A5.9 hcf-1 6295 5.295 0.849 0.838 0.857 0.838 0.979 0.934 - - human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
81. C34E10.11 mrps-26 4649 5.294 0.854 0.875 0.811 0.875 0.955 0.924 - - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
82. C17H12.13 anat-1 12995 5.293 0.838 0.861 0.832 0.861 0.967 0.934 - - AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
83. C16A3.3 let-716 8448 5.292 0.766 0.870 0.863 0.870 0.959 0.964 - -
84. F59B2.3 F59B2.3 2013 5.291 0.897 0.850 0.835 0.850 0.962 0.897 - - Putative N-acetylglucosamine-6-phosphate deacetylase [Source:UniProtKB/Swiss-Prot;Acc:P34480]
85. Y73B6BL.33 hrpf-2 4443 5.291 0.800 0.874 0.864 0.874 0.957 0.922 - - HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
86. C15H11.9 rrbs-1 9177 5.29 0.827 0.843 0.807 0.843 0.986 0.984 - - Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
87. C18E9.3 szy-20 6819 5.289 0.862 0.842 0.824 0.842 0.977 0.942 - - Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
88. C26B2.6 elpc-4 3600 5.287 0.894 0.823 0.811 0.823 0.963 0.973 - - Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
89. C48E7.2 let-611 2191 5.287 0.769 0.841 0.900 0.841 0.957 0.979 - -
90. F10G7.3 unc-85 5206 5.285 0.825 0.816 0.891 0.816 0.987 0.950 - - Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
91. ZK686.3 ZK686.3 23487 5.284 0.849 0.831 0.868 0.831 0.942 0.963 - - Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34669]
92. F13G3.11 mrpl-13 6024 5.284 0.876 0.874 0.725 0.874 0.965 0.970 - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
93. W06H3.2 pus-1 1382 5.282 0.785 0.869 0.810 0.869 0.974 0.975 - - tRNA pseudouridine synthase [Source:RefSeq peptide;Acc:NP_507242]
94. T13H5.5 mrps-18B 3430 5.282 0.828 0.873 0.806 0.873 0.963 0.939 - - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
95. T09E8.2 him-17 4153 5.282 0.789 0.872 0.817 0.872 0.983 0.949 - - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
96. K01G5.8 K01G5.8 4694 5.282 0.843 0.841 0.824 0.841 0.951 0.982 - -
97. Y38A8.3 ulp-2 7403 5.28 0.831 0.869 0.845 0.869 0.912 0.954 - - Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
98. T01C3.8 mut-15 4359 5.279 0.816 0.847 0.847 0.847 0.953 0.969 - - MUTator [Source:RefSeq peptide;Acc:NP_001256638]
99. H20J04.8 mog-2 3084 5.279 0.856 0.871 0.789 0.871 0.952 0.940 - - Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
100. Y14H12B.2 Y14H12B.2 6496 5.279 0.785 0.848 0.845 0.848 0.970 0.983 - -

There are 714 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA