C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F56A8.8

Gene ID Gene Name Reads Transcripts Annotation
F56A8.8 F56A8.8 0 F56A8.8

Genes with expression patterns similar to F56A8.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56A8.8 F56A8.8 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. F23F1.1 nfyc-1 9983 5.738 0.935 - 0.960 - 0.960 0.978 0.957 0.948 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
3. K01G5.4 ran-1 32379 5.73 0.939 - 0.968 - 0.972 0.953 0.947 0.951 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
4. T23H2.1 npp-12 12425 5.715 0.946 - 0.965 - 0.977 0.973 0.919 0.935 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
5. W01G7.3 rpb-11 7826 5.713 0.936 - 0.970 - 0.957 0.974 0.932 0.944 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
6. T06A10.4 lsy-13 7631 5.709 0.912 - 0.957 - 0.960 0.975 0.947 0.958
7. C02F5.5 C02F5.5 3667 5.705 0.955 - 0.963 - 0.972 0.913 0.945 0.957
8. C02B10.5 C02B10.5 9171 5.705 0.934 - 0.963 - 0.975 0.970 0.921 0.942
9. T28D9.2 rsp-5 6460 5.705 0.942 - 0.964 - 0.949 0.978 0.942 0.930 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
10. ZK1010.3 frg-1 3533 5.704 0.920 - 0.961 - 0.976 0.931 0.944 0.972 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
11. F59A2.1 npp-9 34375 5.701 0.941 - 0.952 - 0.976 0.980 0.920 0.932 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
12. Y54E5A.4 npp-4 6288 5.701 0.948 - 0.964 - 0.977 0.940 0.916 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
13. Y37D8A.11 cec-7 8801 5.696 0.928 - 0.959 - 0.980 0.958 0.948 0.923 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
14. E04D5.2 E04D5.2 0 5.693 0.900 - 0.965 - 0.981 0.967 0.927 0.953
15. R07E5.14 rnp-4 11659 5.692 0.935 - 0.961 - 0.969 0.978 0.896 0.953 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
16. F26B1.5 F26B1.5 212 5.691 0.941 - 0.958 - 0.974 0.948 0.920 0.950 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_001040654]
17. B0511.7 B0511.7 1070 5.688 0.922 - 0.925 - 0.966 0.987 0.965 0.923
18. R53.6 psf-1 4721 5.687 0.938 - 0.938 - 0.964 0.985 0.963 0.899 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
19. R12C12.2 ran-5 14517 5.684 0.942 - 0.950 - 0.976 0.933 0.939 0.944 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
20. W02B12.3 rsp-1 9235 5.684 0.935 - 0.973 - 0.957 0.968 0.899 0.952 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
21. F58B3.5 mars-1 6729 5.677 0.925 - 0.897 - 0.981 0.965 0.956 0.953 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
22. Y71G12B.9 lin-65 7476 5.675 0.924 - 0.972 - 0.964 0.964 0.936 0.915 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
23. F58E10.3 ddx-17 15107 5.674 0.954 - 0.965 - 0.955 0.964 0.895 0.941 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
24. Y38A8.3 ulp-2 7403 5.672 0.932 - 0.945 - 0.977 0.965 0.898 0.955 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
25. F32A5.7 lsm-4 3785 5.671 0.934 - 0.969 - 0.960 0.979 0.907 0.922 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
26. Y17G7A.1 hmg-12 29989 5.67 0.942 - 0.959 - 0.979 0.961 0.925 0.904 HMG [Source:RefSeq peptide;Acc:NP_496544]
27. T16G1.11 eif-3.K 14014 5.67 0.923 - 0.940 - 0.976 0.946 0.920 0.965 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
28. Y65B4BL.4 Y65B4BL.4 0 5.669 0.933 - 0.938 - 0.979 0.954 0.949 0.916
29. Y39G10AR.7 ekl-7 7072 5.666 0.926 - 0.951 - 0.970 0.969 0.905 0.945
30. C27B7.1 spr-2 14958 5.665 0.920 - 0.968 - 0.970 0.947 0.915 0.945 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
31. C05C8.6 hpo-9 8263 5.664 0.956 - 0.955 - 0.971 0.954 0.919 0.909
32. Y37D8A.9 mrg-1 14369 5.664 0.926 - 0.953 - 0.967 0.975 0.927 0.916 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
33. Y71H2B.4 Y71H2B.4 24675 5.664 0.924 - 0.965 - 0.955 0.962 0.945 0.913
34. Y69A2AR.22 Y69A2AR.22 4538 5.664 0.931 - 0.943 - 0.956 0.976 0.935 0.923
35. B0238.12 B0238.12 1300 5.663 0.918 - 0.967 - 0.958 0.955 0.945 0.920
36. Y46G5A.4 snrp-200 13827 5.662 0.898 - 0.943 - 0.980 0.943 0.945 0.953 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
37. Y116A8C.42 snr-1 17062 5.661 0.910 - 0.946 - 0.974 0.966 0.921 0.944 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
38. F44B9.7 mdt-30 3651 5.661 0.948 - 0.944 - 0.944 0.951 0.923 0.951 Prion-like-(Q/N-rich) domain-bearing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:P34428]
39. K07A1.12 lin-53 15817 5.659 0.908 - 0.963 - 0.959 0.987 0.901 0.941 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
40. F33H2.5 pole-1 3734 5.658 0.938 - 0.956 - 0.950 0.963 0.942 0.909 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
41. F42A9.9 F42A9.9 0 5.658 0.928 - 0.920 - 0.978 0.963 0.949 0.920
42. C52E4.6 cyl-1 6405 5.658 0.944 - 0.947 - 0.955 0.950 0.898 0.964 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
43. F31E3.3 rfc-4 3828 5.656 0.955 - 0.961 - 0.933 0.943 0.933 0.931 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
44. ZC395.11 ZC395.11 0 5.656 0.931 - 0.914 - 0.962 0.946 0.946 0.957
45. ZK381.1 him-3 4913 5.654 0.950 - 0.953 - 0.968 0.962 0.951 0.870 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
46. Y54G11A.14 Y54G11A.14 87 5.654 0.910 - 0.961 - 0.972 0.967 0.916 0.928
47. Y37E3.20 Y37E3.20 0 5.653 0.930 - 0.948 - 0.977 0.953 0.895 0.950
48. D2007.4 mrpl-18 2880 5.652 0.928 - 0.888 - 0.971 0.973 0.927 0.965 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
49. B0034.1 B0034.1 0 5.652 0.917 - 0.959 - 0.945 0.961 0.935 0.935
50. Y34D9A.1 mrpl-38 5291 5.651 0.934 - 0.917 - 0.955 0.960 0.924 0.961 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
51. F28H1.3 aars-2 13537 5.651 0.917 - 0.960 - 0.971 0.959 0.903 0.941 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
52. T19B4.2 npp-7 13073 5.651 0.926 - 0.951 - 0.962 0.951 0.965 0.896 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
53. F22D6.3 nars-1 18624 5.65 0.934 - 0.952 - 0.964 0.963 0.898 0.939 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
54. C27F2.6 C27F2.6 104 5.649 0.899 - 0.966 - 0.971 0.983 0.958 0.872
55. F10G7.3 unc-85 5206 5.648 0.958 - 0.938 - 0.935 0.974 0.917 0.926 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
56. F32E10.6 cec-5 10643 5.647 0.928 - 0.953 - 0.961 0.945 0.905 0.955 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
57. F26A3.1 F26A3.1 5671 5.646 0.939 - 0.913 - 0.961 0.931 0.975 0.927
58. C34E10.5 prmt-5 12277 5.646 0.898 - 0.953 - 0.972 0.960 0.940 0.923 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
59. Y53F4B.5 Y53F4B.5 0 5.646 0.945 - 0.950 - 0.943 0.942 0.957 0.909
60. F33D4.8 mrps-24 2853 5.645 0.927 - 0.900 - 0.978 0.964 0.910 0.966 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
61. C01F6.8 icln-1 6586 5.644 0.929 - 0.918 - 0.968 0.979 0.921 0.929 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
62. C48B4.11 C48B4.11 4384 5.644 0.917 - 0.968 - 0.976 0.950 0.912 0.921
63. F01F1.3 F01F1.3 1040 5.644 0.934 - 0.934 - 0.927 0.970 0.919 0.960
64. F56D2.6 ddx-15 12282 5.643 0.922 - 0.944 - 0.975 0.953 0.921 0.928 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
65. Y97E10AR.5 rpb-9 3598 5.642 0.956 - 0.930 - 0.967 0.947 0.907 0.935 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
66. Y48G1C.5 Y48G1C.5 278 5.641 0.910 - 0.920 - 0.971 0.951 0.955 0.934
67. C36B1.3 rpb-3 4442 5.641 0.935 - 0.947 - 0.962 0.960 0.884 0.953 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
68. W03G9.9 W03G9.9 0 5.641 0.939 - 0.933 - 0.962 0.956 0.922 0.929
69. Y111B2A.18 rsp-3 43731 5.64 0.920 - 0.956 - 0.942 0.937 0.934 0.951 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
70. Y23H5B.6 Y23H5B.6 5886 5.64 0.916 - 0.954 - 0.963 0.977 0.914 0.916
71. C36B1.5 prp-4 2714 5.64 0.979 - 0.922 - 0.964 0.971 0.911 0.893 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
72. ZC434.7 ZC434.7 2308 5.639 0.908 - 0.948 - 0.951 0.972 0.929 0.931
73. C15H7.3 C15H7.3 1553 5.639 0.938 - 0.952 - 0.970 0.977 0.912 0.890 Putative tyrosine-protein phosphatase C15H7.3 [Source:UniProtKB/Swiss-Prot;Acc:P34337]
74. Y37E3.15 npp-13 7250 5.638 0.939 - 0.925 - 0.986 0.922 0.928 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
75. F58D5.1 hrp-2 17211 5.637 0.933 - 0.928 - 0.955 0.932 0.939 0.950 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
76. Y37H2A.5 fbxa-210 2230 5.636 0.961 - 0.956 - 0.963 0.943 0.889 0.924 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
77. K12C11.2 smo-1 12784 5.636 0.929 - 0.954 - 0.980 0.943 0.915 0.915 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
78. F11A10.2 repo-1 2791 5.636 0.925 - 0.933 - 0.966 0.962 0.936 0.914 REversed POlarity in early embryos [Source:RefSeq peptide;Acc:NP_502290]
79. T08B2.9 fars-1 12650 5.636 0.924 - 0.921 - 0.956 0.953 0.944 0.938 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
80. C33H5.12 rsp-6 23342 5.636 0.912 - 0.969 - 0.944 0.962 0.903 0.946 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
81. B0035.3 B0035.3 4118 5.635 0.956 - 0.949 - 0.976 0.948 0.913 0.893
82. T22D1.5 T22D1.5 7756 5.633 0.919 - 0.932 - 0.975 0.981 0.925 0.901
83. Y65B4BL.2 deps-1 18277 5.633 0.930 - 0.965 - 0.973 0.939 0.892 0.934
84. F41H10.4 F41H10.4 3295 5.63 0.953 - 0.931 - 0.964 0.956 0.908 0.918
85. Y43F4B.4 npp-18 4780 5.629 0.937 - 0.948 - 0.961 0.959 0.938 0.886 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
86. Y54G9A.7 Y54G9A.7 6281 5.629 0.933 - 0.921 - 0.974 0.971 0.933 0.897 2O16; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EC67]
87. F33D4.5 mrpl-1 5337 5.629 0.945 - 0.939 - 0.964 0.944 0.915 0.922 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
88. R09B3.5 mag-1 7496 5.628 0.924 - 0.959 - 0.943 0.974 0.886 0.942 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
89. F42A6.7 hrp-1 28201 5.627 0.920 - 0.955 - 0.961 0.927 0.931 0.933 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
90. T12E12.2 cec-6 4758 5.626 0.894 - 0.946 - 0.963 0.962 0.939 0.922 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
91. K02F2.3 teg-4 3873 5.625 0.890 - 0.971 - 0.951 0.934 0.953 0.926 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
92. T12G3.5 mrpl-51 5192 5.624 0.932 - 0.960 - 0.955 0.975 0.893 0.909 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
93. B0304.4 B0304.4 382 5.624 0.956 - 0.961 - 0.933 0.895 0.957 0.922
94. ZK1098.5 trpp-3 3389 5.624 0.960 - 0.952 - 0.945 0.948 0.859 0.960 Probable trafficking protein particle complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34605]
95. Y14H12B.2 Y14H12B.2 6496 5.623 0.933 - 0.972 - 0.945 0.984 0.893 0.896
96. C24G6.1 syp-2 2843 5.623 0.928 - 0.963 - 0.964 0.951 0.923 0.894
97. T26A5.7 set-1 6948 5.623 0.856 - 0.947 - 0.972 0.977 0.961 0.910 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
98. R13F6.10 cra-1 11610 5.621 0.892 - 0.935 - 0.958 0.945 0.968 0.923 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
99. C08B11.5 sap-49 10553 5.621 0.931 - 0.942 - 0.960 0.969 0.934 0.885 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
100. F32H5.1 F32H5.1 2194 5.619 0.930 - 0.919 - 0.972 0.949 0.972 0.877

There are 1726 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA