C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y53F4B.5

Gene ID Gene Name Reads Transcripts Annotation
Y53F4B.5 Y53F4B.5 0 Y53F4B.5

Genes with expression patterns similar to Y53F4B.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y53F4B.5 Y53F4B.5 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. C27B7.1 spr-2 14958 5.849 0.968 - 0.979 - 0.972 0.969 0.979 0.982 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
3. Y17G7A.1 hmg-12 29989 5.832 0.965 - 0.958 - 0.973 0.986 0.969 0.981 HMG [Source:RefSeq peptide;Acc:NP_496544]
4. D1081.8 cdc-5L 8553 5.829 0.965 - 0.987 - 0.976 0.987 0.950 0.964 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
5. W01G7.3 rpb-11 7826 5.809 0.965 - 0.969 - 0.968 0.978 0.971 0.958 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
6. Y65B4BL.2 deps-1 18277 5.808 0.963 - 0.979 - 0.964 0.984 0.958 0.960
7. F43G9.9 cpn-1 14505 5.807 0.960 - 0.972 - 0.985 0.981 0.947 0.962 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
8. C02B10.5 C02B10.5 9171 5.792 0.967 - 0.970 - 0.974 0.943 0.963 0.975
9. Y54E5A.4 npp-4 6288 5.789 0.966 - 0.983 - 0.953 0.954 0.959 0.974 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
10. F56C9.6 F56C9.6 4303 5.785 0.959 - 0.955 - 0.971 0.991 0.952 0.957
11. B0035.3 B0035.3 4118 5.784 0.973 - 0.967 - 0.961 0.960 0.950 0.973
12. Y32F6A.1 set-22 2474 5.783 0.962 - 0.935 - 0.962 0.984 0.960 0.980 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]
13. Y37H2A.5 fbxa-210 2230 5.782 0.948 - 0.974 - 0.967 0.977 0.953 0.963 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
14. W02B12.3 rsp-1 9235 5.781 0.969 - 0.960 - 0.961 0.978 0.952 0.961 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
15. B0238.12 B0238.12 1300 5.78 0.970 - 0.953 - 0.946 0.986 0.969 0.956
16. C33H5.15 sgo-1 3674 5.778 0.967 - 0.972 - 0.940 0.955 0.961 0.983 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
17. B0035.13 B0035.13 3573 5.778 0.948 - 0.972 - 0.959 0.982 0.952 0.965
18. T23H2.1 npp-12 12425 5.772 0.969 - 0.964 - 0.966 0.963 0.962 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
19. C48B4.11 C48B4.11 4384 5.771 0.952 - 0.972 - 0.971 0.982 0.946 0.948
20. M05D6.3 M05D6.3 556 5.771 0.975 - 0.966 - 0.965 0.970 0.944 0.951
21. F31C3.5 psf-2 1813 5.77 0.958 - 0.965 - 0.968 0.957 0.966 0.956 Probable DNA replication complex GINS protein PSF2 [Source:UniProtKB/Swiss-Prot;Acc:O62193]
22. F33H2.5 pole-1 3734 5.768 0.959 - 0.952 - 0.955 0.972 0.983 0.947 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
23. F12F6.8 F12F6.8 0 5.765 0.969 - 0.974 - 0.945 0.971 0.961 0.945
24. R12C12.2 ran-5 14517 5.765 0.963 - 0.962 - 0.963 0.950 0.970 0.957 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
25. C05C8.6 hpo-9 8263 5.764 0.967 - 0.964 - 0.948 0.971 0.975 0.939
26. Y65B4BL.4 Y65B4BL.4 0 5.764 0.976 - 0.933 - 0.963 0.950 0.974 0.968
27. Y37E3.15 npp-13 7250 5.764 0.963 - 0.935 - 0.959 0.953 0.969 0.985 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
28. F26B1.5 F26B1.5 212 5.763 0.950 - 0.956 - 0.953 0.978 0.971 0.955 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_001040654]
29. ZK507.6 cya-1 6807 5.762 0.957 - 0.955 - 0.973 0.989 0.964 0.924 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
30. K06A5.7 cdc-25.1 14961 5.759 0.928 - 0.969 - 0.932 0.985 0.950 0.995 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
31. C18G1.5 hil-4 21692 5.757 0.951 - 0.981 - 0.959 0.947 0.958 0.961 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
32. Y102E9.3 Y102E9.3 0 5.757 0.950 - 0.972 - 0.962 0.945 0.955 0.973
33. W03G9.9 W03G9.9 0 5.757 0.967 - 0.944 - 0.928 0.971 0.969 0.978
34. T07F12.1 T07F12.1 0 5.756 0.960 - 0.989 - 0.972 0.930 0.955 0.950
35. F58A4.3 hcp-3 8787 5.756 0.953 - 0.982 - 0.973 0.973 0.944 0.931 Histone H3-like centromeric protein hcp-3 [Source:UniProtKB/Swiss-Prot;Acc:P34470]
36. F23F1.1 nfyc-1 9983 5.754 0.977 - 0.970 - 0.896 0.959 0.975 0.977 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
37. K01G5.4 ran-1 32379 5.754 0.977 - 0.952 - 0.958 0.957 0.958 0.952 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
38. Y73B6BL.38 puf-11 15511 5.752 0.936 - 0.956 - 0.964 0.971 0.963 0.962 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_741425]
39. F18A11.1 puf-6 11201 5.752 0.898 - 0.945 - 0.986 0.986 0.983 0.954 Pumilio domain-containing protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O01322]
40. F44E2.9 F44E2.9 1289 5.75 0.960 - 0.973 - 0.942 0.972 0.954 0.949
41. F42A9.9 F42A9.9 0 5.749 0.981 - 0.970 - 0.942 0.935 0.956 0.965
42. C13G5.2 C13G5.2 3532 5.749 0.985 - 0.962 - 0.960 0.958 0.933 0.951
43. T28D9.9 T28D9.9 328 5.749 0.965 - 0.980 - 0.943 0.954 0.931 0.976
44. C29A12.2 C29A12.2 0 5.748 0.956 - 0.960 - 0.965 0.980 0.940 0.947
45. F56D2.6 ddx-15 12282 5.747 0.919 - 0.957 - 0.969 0.960 0.967 0.975 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
46. R53.6 psf-1 4721 5.745 0.971 - 0.948 - 0.913 0.963 0.966 0.984 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
47. F52B5.7 F52B5.7 24 5.745 0.935 - 0.969 - 0.962 0.968 0.940 0.971
48. T23B5.1 prmt-3 10677 5.742 0.955 - 0.978 - 0.954 0.934 0.963 0.958 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
49. F32H2.4 thoc-3 3861 5.742 0.968 - 0.970 - 0.925 0.961 0.956 0.962 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
50. Y17G7B.5 mcm-2 6246 5.741 0.948 - 0.975 - 0.909 0.985 0.946 0.978 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
51. C38D4.7 C38D4.7 473 5.74 0.941 - 0.934 - 0.960 0.967 0.978 0.960
52. F23C8.11 F23C8.11 0 5.74 0.949 - 0.955 - 0.938 0.982 0.968 0.948
53. F32D1.10 mcm-7 21233 5.739 0.923 - 0.979 - 0.942 0.977 0.941 0.977 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
54. Y47D3A.31 Y47D3A.31 3677 5.738 0.945 - 0.973 - 0.943 0.961 0.948 0.968
55. Y47G6A.8 crn-1 3494 5.737 0.952 - 0.963 - 0.947 0.965 0.947 0.963 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
56. T19B4.2 npp-7 13073 5.737 0.956 - 0.962 - 0.950 0.945 0.961 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
57. T07C4.10 T07C4.10 1563 5.737 0.967 - 0.972 - 0.932 0.975 0.953 0.938
58. Y54E2A.3 tac-1 6308 5.737 0.965 - 0.966 - 0.926 0.949 0.981 0.950 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
59. C17E4.10 C17E4.10 7034 5.735 0.949 - 0.978 - 0.944 0.948 0.957 0.959
60. W03G1.6 pig-1 5015 5.733 0.929 - 0.973 - 0.946 0.969 0.974 0.942 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
61. F28H1.3 aars-2 13537 5.733 0.950 - 0.956 - 0.967 0.948 0.934 0.978 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
62. F58F6.4 rfc-2 2074 5.731 0.939 - 0.970 - 0.930 0.972 0.952 0.968 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
63. Y38A8.3 ulp-2 7403 5.73 0.964 - 0.952 - 0.957 0.956 0.956 0.945 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
64. K12C11.2 smo-1 12784 5.729 0.980 - 0.935 - 0.963 0.951 0.956 0.944 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
65. Y23H5B.1 Y23H5B.1 389 5.728 0.959 - 0.938 - 0.970 0.931 0.979 0.951
66. Y17G9B.3 cyp-31A3 1709 5.726 0.946 - 0.950 - 0.942 0.957 0.975 0.956 CYtochrome P450 family [Source:RefSeq peptide;Acc:NP_500637]
67. K02F2.4 ulp-5 3433 5.726 0.928 - 0.965 - 0.965 0.976 0.943 0.949 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
68. ZK809.8 ZK809.8 43343 5.725 0.929 - 0.956 - 0.962 0.961 0.964 0.953
69. F49E8.1 nprl-2 1851 5.724 0.930 - 0.973 - 0.928 0.961 0.952 0.980 LOW QUALITY PROTEIN: Nitrogen Permease Regulator Like homolog [Source:RefSeq peptide;Acc:NP_001294159]
70. Y113G7B.5 fog-2 2753 5.723 0.979 - 0.975 - 0.925 0.919 0.974 0.951 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
71. B0495.6 moa-2 6366 5.723 0.969 - 0.951 - 0.936 0.933 0.952 0.982
72. F35G12.9 apc-11 2538 5.723 0.951 - 0.941 - 0.945 0.962 0.970 0.954 Anaphase Promoting Complex; see also mat [Source:RefSeq peptide;Acc:NP_497937]
73. F41H10.4 F41H10.4 3295 5.723 0.972 - 0.965 - 0.940 0.972 0.944 0.930
74. F46B6.3 smg-4 4959 5.722 0.965 - 0.974 - 0.905 0.978 0.937 0.963 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
75. Y39G10AR.7 ekl-7 7072 5.721 0.932 - 0.956 - 0.959 0.966 0.932 0.976
76. Y43C5A.5 thk-1 2504 5.721 0.951 - 0.964 - 0.939 0.947 0.936 0.984 Thymidine kinase [Source:RefSeq peptide;Acc:NP_001255477]
77. B0393.4 B0393.4 2142 5.72 0.954 - 0.947 - 0.916 0.991 0.944 0.968
78. C30B5.6 C30B5.6 0 5.718 0.947 - 0.952 - 0.911 0.964 0.970 0.974
79. C06A5.9 rnf-1 2469 5.717 0.945 - 0.937 - 0.925 0.992 0.978 0.940 RiNg Finger protein [Source:RefSeq peptide;Acc:NP_491738]
80. Y46G5A.4 snrp-200 13827 5.717 0.926 - 0.950 - 0.930 0.950 0.981 0.980 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
81. C26E6.4 rpb-2 7053 5.716 0.943 - 0.936 - 0.966 0.956 0.964 0.951 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
82. B0304.4 B0304.4 382 5.715 0.960 - 0.970 - 0.931 0.932 0.970 0.952
83. Y54H5A.3 tag-262 4269 5.715 0.946 - 0.956 - 0.954 0.985 0.955 0.919
84. C56A3.6 C56A3.6 3709 5.713 0.942 - 0.952 - 0.921 0.957 0.966 0.975
85. ZK686.4 snu-23 9040 5.712 0.959 - 0.976 - 0.946 0.934 0.942 0.955 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
86. Y37D8A.9 mrg-1 14369 5.712 0.964 - 0.973 - 0.917 0.960 0.943 0.955 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
87. C18F10.2 C18F10.2 307 5.71 0.971 - 0.933 - 0.961 0.964 0.928 0.953
88. K12D12.2 npp-3 6914 5.709 0.930 - 0.952 - 0.937 0.946 0.969 0.975 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
89. C08B6.7 wdr-20 7575 5.709 0.959 - 0.971 - 0.958 0.964 0.903 0.954 WD repeat-containing protein 20 homolog [Source:UniProtKB/Swiss-Prot;Acc:D9N129]
90. F52C9.7 mog-3 9880 5.708 0.958 - 0.974 - 0.913 0.935 0.982 0.946 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
91. F32H2.1 snpc-4 7581 5.708 0.957 - 0.941 - 0.969 0.945 0.943 0.953 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
92. F53F10.5 npp-11 3378 5.708 0.970 - 0.949 - 0.956 0.956 0.920 0.957 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
93. C08B11.5 sap-49 10553 5.708 0.950 - 0.922 - 0.944 0.970 0.972 0.950 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
94. T05E8.3 let-355 8169 5.707 0.905 - 0.956 - 0.963 0.931 0.969 0.983
95. R186.8 R186.8 4785 5.705 0.963 - 0.945 - 0.929 0.937 0.960 0.971
96. EEED8.1 tofu-6 3962 5.705 0.957 - 0.958 - 0.954 0.959 0.929 0.948 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
97. F01F1.3 F01F1.3 1040 5.705 0.980 - 0.949 - 0.942 0.962 0.963 0.909
98. C26D10.2 hel-1 28697 5.704 0.928 - 0.908 - 0.951 0.985 0.957 0.975 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
99. ZK637.7 lin-9 5999 5.703 0.944 - 0.979 - 0.954 0.958 0.936 0.932
100. D1054.15 plrg-1 2282 5.703 0.967 - 0.936 - 0.965 0.915 0.967 0.953 PLeiotropic ReGulator (vertebrate) homolog [Source:RefSeq peptide;Acc:NP_001256260]

There are 2214 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA