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Results for F55F8.5

Gene ID Gene Name Reads Transcripts Annotation
F55F8.5 wdr-12 5052 F55F8.5.1, F55F8.5.2 Ribosome biogenesis protein WDR12 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91343]

Genes with expression patterns similar to F55F8.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F55F8.5 wdr-12 5052 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ribosome biogenesis protein WDR12 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91343]
2. C34E10.5 prmt-5 12277 7.531 0.949 0.899 0.940 0.899 0.973 0.957 0.938 0.976 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
3. R13F6.10 cra-1 11610 7.519 0.961 0.880 0.931 0.880 0.985 0.942 0.961 0.979 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
4. C53D5.6 imb-3 28921 7.507 0.944 0.886 0.935 0.886 0.975 0.966 0.943 0.972 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
5. Y46G5A.4 snrp-200 13827 7.501 0.921 0.899 0.935 0.899 0.977 0.944 0.950 0.976 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
6. F42A6.7 hrp-1 28201 7.496 0.949 0.892 0.940 0.892 0.969 0.953 0.939 0.962 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
7. PAR2.1 mtss-1 4055 7.489 0.973 0.886 0.938 0.886 0.959 0.939 0.962 0.946 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
8. F55F8.4 cir-1 9437 7.487 0.915 0.930 0.926 0.930 0.976 0.950 0.928 0.932 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
9. K01G5.4 ran-1 32379 7.482 0.950 0.884 0.920 0.884 0.969 0.930 0.964 0.981 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
10. F15D4.3 rmo-1 18517 7.481 0.930 0.946 0.928 0.946 0.928 0.936 0.915 0.952
11. T06A10.4 lsy-13 7631 7.478 0.970 0.889 0.935 0.889 0.970 0.897 0.959 0.969
12. C08B11.5 sap-49 10553 7.477 0.941 0.897 0.936 0.897 0.978 0.916 0.947 0.965 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
13. T19B4.2 npp-7 13073 7.473 0.939 0.894 0.928 0.894 0.979 0.910 0.966 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
14. T02G5.9 kars-1 9763 7.473 0.966 0.891 0.924 0.891 0.976 0.930 0.929 0.966 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
15. F56D1.7 daz-1 23684 7.473 0.959 0.871 0.933 0.871 0.961 0.954 0.953 0.971 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
16. T08B2.9 fars-1 12650 7.472 0.961 0.904 0.931 0.904 0.947 0.924 0.946 0.955 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
17. T01E8.6 mrps-14 9328 7.467 0.959 0.900 0.932 0.900 0.959 0.926 0.919 0.972 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
18. F23F1.1 nfyc-1 9983 7.467 0.937 0.889 0.918 0.889 0.963 0.950 0.951 0.970 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
19. Y54E5A.4 npp-4 6288 7.465 0.963 0.884 0.926 0.884 0.980 0.927 0.931 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
20. E01A2.4 let-504 9788 7.465 0.941 0.896 0.894 0.896 0.980 0.956 0.952 0.950
21. C06G3.11 tin-9.1 7773 7.465 0.934 0.893 0.893 0.893 0.974 0.953 0.971 0.954 Mitochondrial import inner membrane translocase subunit Tim9 [Source:UniProtKB/Swiss-Prot;Acc:Q17754]
22. F22D6.3 nars-1 18624 7.455 0.942 0.900 0.945 0.900 0.976 0.917 0.898 0.977 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
23. Y37D8A.11 cec-7 8801 7.45 0.956 0.881 0.934 0.881 0.962 0.930 0.954 0.952 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
24. ZC262.8 mrps-18A 3125 7.45 0.954 0.876 0.887 0.876 0.983 0.967 0.929 0.978 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498835]
25. B0035.12 sart-3 7188 7.446 0.941 0.885 0.931 0.885 0.955 0.954 0.968 0.927 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
26. Y48G8AL.6 smg-2 12561 7.445 0.948 0.900 0.926 0.900 0.951 0.951 0.900 0.969 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
27. Y40B1B.5 eif-3.J 15061 7.445 0.952 0.892 0.933 0.892 0.973 0.929 0.933 0.941 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
28. F28D9.1 rsr-1 4282 7.445 0.901 0.885 0.926 0.885 0.951 0.969 0.967 0.961 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
29. C25D7.8 otub-1 7941 7.442 0.981 0.889 0.946 0.889 0.971 0.912 0.898 0.956 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
30. F32E10.6 cec-5 10643 7.441 0.926 0.875 0.925 0.875 0.984 0.950 0.922 0.984 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
31. C48E7.3 lpd-2 10330 7.438 0.945 0.880 0.929 0.880 0.950 0.930 0.961 0.963 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
32. F57B10.11 bag-1 3395 7.437 0.959 0.892 0.919 0.892 0.964 0.933 0.923 0.955 BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:O44739]
33. F56D2.6 ddx-15 12282 7.437 0.927 0.892 0.927 0.892 0.975 0.928 0.930 0.966 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
34. T10F2.4 prp-19 11298 7.437 0.960 0.888 0.938 0.888 0.977 0.913 0.914 0.959 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
35. C52E4.6 cyl-1 6405 7.437 0.959 0.903 0.911 0.903 0.955 0.926 0.911 0.969 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
36. Y34D9A.1 mrpl-38 5291 7.434 0.943 0.905 0.905 0.905 0.955 0.936 0.935 0.950 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
37. T16G1.11 eif-3.K 14014 7.434 0.966 0.883 0.932 0.883 0.971 0.895 0.932 0.972 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
38. Y43F8C.8 mrps-28 4036 7.434 0.925 0.895 0.906 0.895 0.973 0.944 0.934 0.962 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
39. F56F3.1 ifet-1 25772 7.433 0.971 0.877 0.934 0.877 0.956 0.892 0.943 0.983 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
40. F32H2.1 snpc-4 7581 7.428 0.954 0.891 0.916 0.891 0.977 0.933 0.917 0.949 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
41. C02B10.5 C02B10.5 9171 7.426 0.946 0.871 0.927 0.871 0.964 0.939 0.925 0.983
42. Y49F6B.4 smu-2 4164 7.425 0.935 0.883 0.884 0.883 0.957 0.956 0.951 0.976 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
43. W09C5.7 W09C5.7 2359 7.425 0.970 0.853 0.910 0.853 0.980 0.961 0.957 0.941
44. ZK616.6 perm-3 16186 7.422 0.939 0.892 0.923 0.892 0.959 0.929 0.922 0.966 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
45. K04G2.1 iftb-1 12590 7.422 0.944 0.890 0.932 0.890 0.955 0.946 0.912 0.953 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
46. Y53C12B.3 nos-3 20231 7.422 0.956 0.884 0.921 0.884 0.951 0.940 0.924 0.962 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
47. Y116A8C.35 uaf-2 13808 7.421 0.949 0.902 0.919 0.902 0.949 0.945 0.898 0.957 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
48. F10G8.3 rae-1 7542 7.421 0.971 0.886 0.937 0.886 0.974 0.960 0.861 0.946 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
49. ZK1127.4 ZK1127.4 3088 7.421 0.921 0.885 0.928 0.885 0.965 0.919 0.942 0.976 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
50. K11D12.2 pqn-51 15951 7.418 0.951 0.889 0.934 0.889 0.975 0.929 0.882 0.969 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
51. Y110A7A.8 prp-31 4436 7.417 0.931 0.890 0.910 0.890 0.965 0.943 0.956 0.932 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
52. C26E6.4 rpb-2 7053 7.416 0.915 0.892 0.920 0.892 0.981 0.922 0.931 0.963 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
53. Y65B4BR.5 icd-2 58321 7.415 0.953 0.874 0.922 0.874 0.971 0.930 0.932 0.959 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
54. F58D5.1 hrp-2 17211 7.415 0.958 0.879 0.922 0.879 0.958 0.931 0.943 0.945 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
55. T28D9.2 rsp-5 6460 7.414 0.942 0.870 0.924 0.870 0.957 0.921 0.957 0.973 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
56. K08F4.2 gtbp-1 25222 7.413 0.951 0.887 0.945 0.887 0.958 0.923 0.902 0.960 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
57. F54B3.3 atad-3 9583 7.413 0.939 0.913 0.872 0.913 0.948 0.909 0.960 0.959 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
58. F46A9.4 skr-2 16831 7.412 0.958 0.856 0.931 0.856 0.972 0.963 0.929 0.947 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
59. Y61A9LA.8 sut-2 11388 7.411 0.947 0.872 0.913 0.872 0.980 0.956 0.899 0.972 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
60. Y111B2A.18 rsp-3 43731 7.409 0.937 0.873 0.929 0.873 0.964 0.916 0.940 0.977 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
61. T21C9.12 scpl-4 14723 7.409 0.929 0.912 0.906 0.912 0.966 0.951 0.925 0.908 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
62. F42A10.1 abcf-3 5557 7.408 0.933 0.864 0.916 0.864 0.980 0.957 0.924 0.970 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
63. F45H11.3 hpo-35 8299 7.407 0.936 0.866 0.938 0.866 0.966 0.964 0.934 0.937
64. B0464.1 dars-1 12331 7.406 0.930 0.880 0.913 0.880 0.973 0.932 0.924 0.974 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
65. Y17G7A.1 hmg-12 29989 7.405 0.963 0.883 0.927 0.883 0.963 0.902 0.932 0.952 HMG [Source:RefSeq peptide;Acc:NP_496544]
66. W02B12.3 rsp-1 9235 7.405 0.956 0.881 0.931 0.881 0.965 0.921 0.904 0.966 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
67. Y116A8C.42 snr-1 17062 7.404 0.955 0.879 0.937 0.879 0.951 0.904 0.926 0.973 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
68. ZK328.2 eftu-2 7040 7.404 0.918 0.906 0.923 0.906 0.954 0.936 0.905 0.956 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
69. R12C12.2 ran-5 14517 7.403 0.958 0.892 0.915 0.892 0.954 0.885 0.958 0.949 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
70. C08B11.6 arp-6 4646 7.4 0.966 0.864 0.921 0.864 0.965 0.937 0.908 0.975 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
71. Y71F9B.16 dnj-30 4262 7.4 0.957 0.867 0.914 0.867 0.947 0.974 0.916 0.958 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
72. T24H7.1 phb-2 28775 7.4 0.949 0.922 0.845 0.922 0.977 0.882 0.948 0.955 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
73. C15F1.4 ppp-1 1774 7.399 0.950 0.883 0.900 0.883 0.966 0.939 0.905 0.973 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
74. K07A12.7 mrps-15 6325 7.399 0.928 0.877 0.874 0.877 0.960 0.962 0.957 0.964 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
75. T12E12.4 drp-1 7694 7.396 0.926 0.918 0.930 0.918 0.945 0.905 0.894 0.960 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
76. C43E11.1 acin-1 7781 7.396 0.920 0.880 0.929 0.880 0.983 0.964 0.905 0.935 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
77. C56C10.8 icd-1 89788 7.396 0.938 0.865 0.888 0.865 0.979 0.942 0.966 0.953 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
78. C18E9.6 tomm-40 13426 7.396 0.941 0.891 0.913 0.891 0.972 0.917 0.933 0.938 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
79. Y56A3A.17 npp-16 5391 7.396 0.941 0.882 0.919 0.882 0.971 0.946 0.890 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
80. D2030.6 prg-1 26751 7.395 0.922 0.854 0.928 0.854 0.982 0.952 0.934 0.969 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
81. T12D8.2 drr-2 16208 7.395 0.918 0.872 0.923 0.872 0.952 0.956 0.942 0.960 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
82. K08E3.8 mdt-29 4678 7.395 0.934 0.897 0.929 0.897 0.956 0.926 0.922 0.934 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
83. ZK856.12 hpo-40 7855 7.395 0.957 0.865 0.928 0.865 0.961 0.936 0.954 0.929
84. Y102A5A.1 cand-1 11808 7.395 0.955 0.903 0.923 0.903 0.955 0.900 0.916 0.940 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
85. T21D12.3 pqbp-1.1 5755 7.395 0.917 0.870 0.922 0.870 0.964 0.939 0.940 0.973 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
86. Y38A8.3 ulp-2 7403 7.394 0.942 0.883 0.915 0.883 0.978 0.923 0.913 0.957 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
87. Y23H5B.6 Y23H5B.6 5886 7.394 0.939 0.882 0.925 0.882 0.954 0.934 0.911 0.967
88. T17E9.2 nmt-1 8017 7.394 0.949 0.903 0.918 0.903 0.952 0.914 0.889 0.966 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
89. K08F11.3 cif-1 10218 7.394 0.959 0.856 0.908 0.856 0.977 0.943 0.936 0.959 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
90. F55H2.6 clu-1 21404 7.392 0.904 0.891 0.911 0.891 0.969 0.914 0.949 0.963 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
91. T23G11.7 T23G11.7 10001 7.392 0.911 0.896 0.884 0.896 0.922 0.983 0.942 0.958
92. Y71G12B.9 lin-65 7476 7.392 0.927 0.895 0.942 0.895 0.957 0.923 0.931 0.922 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
93. Y41E3.4 qars-1 4391 7.391 0.955 0.845 0.917 0.845 0.971 0.957 0.944 0.957 Probable glutamine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:O62431]
94. T12D8.8 hip-1 18283 7.39 0.930 0.885 0.918 0.885 0.958 0.929 0.928 0.957 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
95. C06E7.1 sams-3 26921 7.388 0.952 0.872 0.923 0.872 0.964 0.964 0.938 0.903 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
96. T04A8.14 emb-5 11746 7.387 0.915 0.892 0.917 0.892 0.974 0.926 0.895 0.976 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
97. Y39G10AR.7 ekl-7 7072 7.387 0.943 0.872 0.905 0.872 0.978 0.925 0.915 0.977
98. Y54E10A.9 vbh-1 28746 7.386 0.969 0.896 0.917 0.896 0.950 0.926 0.884 0.948 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
99. F57B9.5 byn-1 58236 7.386 0.961 0.886 0.899 0.886 0.957 0.921 0.906 0.970 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
100. H19N07.1 erfa-3 19869 7.384 0.929 0.903 0.923 0.903 0.974 0.916 0.902 0.934 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA