C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y87G2A.10

Gene ID Gene Name Reads Transcripts Annotation
Y87G2A.10 vps-28 3403 Y87G2A.10a, Y87G2A.10b Vacuolar protein sorting-associated protein 28 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NA26]

Genes with expression patterns similar to Y87G2A.10

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y87G2A.10 vps-28 3403 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Vacuolar protein sorting-associated protein 28 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NA26]
2. C15H11.4 dhs-22 21674 7.652 0.976 0.975 0.963 0.975 0.976 0.961 0.926 0.900 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
3. C53A5.3 hda-1 18413 7.639 0.963 0.968 0.962 0.968 0.956 0.972 0.939 0.911 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
4. F54C8.5 rheb-1 6358 7.626 0.983 0.959 0.961 0.959 0.977 0.953 0.936 0.898 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
5. K11D12.2 pqn-51 15951 7.614 0.952 0.966 0.955 0.966 0.965 0.971 0.954 0.885 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
6. ZK616.6 perm-3 16186 7.609 0.958 0.960 0.947 0.960 0.970 0.962 0.900 0.952 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
7. C09G12.9 tsg-101 9451 7.608 0.976 0.969 0.975 0.969 0.957 0.950 0.895 0.917 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
8. T12D8.3 acbp-5 6816 7.608 0.953 0.978 0.968 0.978 0.960 0.952 0.923 0.896 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
9. T10C6.4 srx-44 8454 7.6 0.976 0.962 0.978 0.962 0.971 0.942 0.928 0.881 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
10. C25D7.8 otub-1 7941 7.594 0.956 0.966 0.956 0.966 0.958 0.953 0.943 0.896 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
11. K08E7.1 eak-7 18960 7.59 0.962 0.970 0.971 0.970 0.949 0.936 0.956 0.876 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
12. T04A8.14 emb-5 11746 7.574 0.936 0.982 0.967 0.982 0.962 0.968 0.859 0.918 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
13. F23B12.6 fntb-1 4392 7.565 0.953 0.964 0.959 0.964 0.966 0.959 0.909 0.891 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
14. R05D11.3 ran-4 15494 7.56 0.966 0.967 0.945 0.967 0.962 0.947 0.904 0.902 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
15. T09B4.10 chn-1 5327 7.55 0.962 0.945 0.965 0.945 0.954 0.951 0.915 0.913 C-term of Hsp70-iNteracting protein (CHIP family) [Source:RefSeq peptide;Acc:NP_491781]
16. Y56A3A.20 ccf-1 18463 7.547 0.965 0.954 0.944 0.954 0.957 0.957 0.897 0.919 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
17. W01G7.3 rpb-11 7826 7.547 0.965 0.961 0.976 0.961 0.959 0.915 0.927 0.883 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
18. F08F8.3 kap-1 31437 7.544 0.962 0.970 0.931 0.970 0.975 0.950 0.914 0.872 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
19. K10C3.2 ensa-1 19836 7.544 0.958 0.965 0.961 0.965 0.964 0.941 0.892 0.898 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
20. T19A6.3 nepr-1 6606 7.543 0.963 0.962 0.952 0.962 0.956 0.944 0.921 0.883 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
21. Y102A5A.1 cand-1 11808 7.543 0.941 0.979 0.940 0.979 0.951 0.964 0.913 0.876 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
22. T12E12.4 drp-1 7694 7.543 0.970 0.944 0.958 0.944 0.957 0.971 0.950 0.849 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
23. T19B4.2 npp-7 13073 7.542 0.951 0.972 0.946 0.972 0.947 0.927 0.921 0.906 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
24. R144.4 wip-1 14168 7.542 0.942 0.960 0.972 0.960 0.966 0.952 0.902 0.888 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
25. C02B10.5 C02B10.5 9171 7.541 0.964 0.942 0.962 0.942 0.929 0.949 0.929 0.924
26. F13G3.4 dylt-1 21345 7.539 0.907 0.950 0.937 0.950 0.974 0.956 0.933 0.932 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
27. W02F12.6 sna-1 7338 7.539 0.968 0.957 0.956 0.957 0.962 0.906 0.953 0.880 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
28. F32H2.4 thoc-3 3861 7.538 0.942 0.975 0.956 0.975 0.962 0.933 0.920 0.875 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
29. Y54E2A.3 tac-1 6308 7.537 0.942 0.963 0.927 0.963 0.964 0.928 0.926 0.924 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
30. Y54E5A.4 npp-4 6288 7.537 0.962 0.960 0.954 0.960 0.947 0.929 0.944 0.881 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
31. Y54E5B.3 let-49 2437 7.534 0.962 0.954 0.962 0.954 0.967 0.949 0.913 0.873 Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]
32. T10F2.4 prp-19 11298 7.533 0.966 0.965 0.962 0.965 0.970 0.904 0.918 0.883 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
33. Y111B2A.18 rsp-3 43731 7.529 0.950 0.972 0.955 0.972 0.988 0.918 0.896 0.878 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
34. B0035.3 B0035.3 4118 7.528 0.948 0.968 0.952 0.968 0.937 0.951 0.897 0.907
35. K01G5.4 ran-1 32379 7.522 0.949 0.975 0.962 0.975 0.961 0.910 0.902 0.888 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
36. C18D11.4 rsp-8 18308 7.522 0.926 0.965 0.946 0.965 0.977 0.930 0.898 0.915 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
37. T12D8.6 mlc-5 19567 7.516 0.977 0.976 0.944 0.976 0.955 0.951 0.864 0.873 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
38. Y113G7B.23 swsn-1 13766 7.516 0.930 0.974 0.976 0.974 0.959 0.965 0.846 0.892 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
39. Y43F4B.4 npp-18 4780 7.516 0.975 0.962 0.940 0.962 0.931 0.930 0.939 0.877 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
40. H17B01.4 emc-1 9037 7.515 0.933 0.967 0.926 0.967 0.945 0.935 0.931 0.911 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
41. Y57E12AM.1 Y57E12AM.1 10510 7.515 0.945 0.926 0.964 0.926 0.966 0.947 0.907 0.934 Transmembrane protein 258 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q965T1]
42. C27B7.1 spr-2 14958 7.515 0.947 0.965 0.970 0.965 0.959 0.910 0.910 0.889 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
43. F39B2.2 uev-1 13597 7.515 0.947 0.959 0.946 0.959 0.966 0.950 0.918 0.870 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
44. C48E7.3 lpd-2 10330 7.514 0.934 0.967 0.966 0.967 0.934 0.934 0.919 0.893 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
45. C09G4.3 cks-1 17852 7.514 0.967 0.975 0.956 0.975 0.973 0.907 0.907 0.854 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
46. R09B3.4 ubc-12 7667 7.514 0.968 0.969 0.962 0.969 0.966 0.929 0.909 0.842 NEDD8-conjugating enzyme ubc-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVK5]
47. C52E4.6 cyl-1 6405 7.51 0.948 0.952 0.953 0.952 0.963 0.933 0.947 0.862 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
48. T21D12.3 pqbp-1.1 5755 7.508 0.958 0.946 0.974 0.946 0.946 0.912 0.928 0.898 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
49. B0303.15 mrpl-11 9889 7.507 0.934 0.958 0.936 0.958 0.952 0.921 0.933 0.915 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
50. ZK742.1 xpo-1 20741 7.507 0.909 0.975 0.948 0.975 0.957 0.925 0.955 0.863 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
51. F39H11.2 tlf-1 6231 7.507 0.942 0.976 0.966 0.976 0.949 0.939 0.896 0.863 TBP-Like Factor [Source:RefSeq peptide;Acc:NP_492356]
52. ZC518.3 ccr-4 15531 7.505 0.914 0.980 0.963 0.980 0.962 0.945 0.908 0.853 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
53. T06A10.4 lsy-13 7631 7.505 0.927 0.960 0.933 0.960 0.959 0.927 0.925 0.914
54. F22D6.3 nars-1 18624 7.503 0.940 0.965 0.944 0.965 0.970 0.934 0.868 0.917 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
55. B0285.1 cdk-12 5900 7.503 0.959 0.954 0.962 0.954 0.927 0.933 0.924 0.890 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
56. C25A1.4 C25A1.4 15507 7.502 0.978 0.964 0.964 0.964 0.920 0.894 0.938 0.880
57. E01A2.2 E01A2.2 12356 7.502 0.955 0.966 0.969 0.966 0.976 0.912 0.895 0.863 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
58. Y38A8.2 pbs-3 18117 7.5 0.975 0.971 0.968 0.971 0.953 0.949 0.866 0.847 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
59. F42A6.7 hrp-1 28201 7.496 0.943 0.959 0.956 0.959 0.971 0.913 0.935 0.860 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
60. W04D2.5 mrps-11 5757 7.496 0.947 0.957 0.925 0.957 0.957 0.956 0.916 0.881 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
61. R12C12.2 ran-5 14517 7.491 0.956 0.965 0.967 0.965 0.937 0.917 0.928 0.856 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
62. F58E10.3 ddx-17 15107 7.49 0.949 0.949 0.961 0.949 0.937 0.917 0.922 0.906 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
63. K02F3.11 rnp-5 6205 7.486 0.932 0.980 0.975 0.980 0.940 0.910 0.895 0.874 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
64. F28H1.3 aars-2 13537 7.485 0.931 0.965 0.938 0.965 0.948 0.935 0.930 0.873 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
65. D2013.2 wdfy-2 7286 7.485 0.967 0.972 0.948 0.972 0.930 0.933 0.881 0.882 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
66. ZK637.3 lnkn-1 16095 7.482 0.942 0.954 0.922 0.954 0.966 0.964 0.911 0.869 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
67. D2089.1 rsp-7 11057 7.482 0.932 0.959 0.958 0.959 0.952 0.944 0.850 0.928 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
68. T24F1.1 raga-1 16171 7.481 0.943 0.966 0.954 0.966 0.940 0.933 0.910 0.869 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
69. F59E12.11 sam-4 8179 7.48 0.957 0.977 0.957 0.977 0.925 0.904 0.926 0.857
70. T23H2.1 npp-12 12425 7.479 0.922 0.974 0.965 0.974 0.920 0.903 0.938 0.883 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
71. F11A10.2 repo-1 2791 7.479 0.936 0.937 0.907 0.937 0.974 0.944 0.927 0.917 REversed POlarity in early embryos [Source:RefSeq peptide;Acc:NP_502290]
72. ZK686.4 snu-23 9040 7.479 0.940 0.954 0.965 0.954 0.949 0.927 0.912 0.878 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
73. C28H8.9 dpff-1 8684 7.478 0.944 0.950 0.954 0.950 0.960 0.934 0.905 0.881 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
74. T14G10.3 ttr-53 7558 7.478 0.937 0.964 0.956 0.964 0.970 0.940 0.885 0.862 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_501856]
75. T08B2.9 fars-1 12650 7.478 0.930 0.945 0.907 0.945 0.970 0.959 0.927 0.895 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
76. R74.8 R74.8 7722 7.476 0.965 0.966 0.956 0.966 0.882 0.901 0.923 0.917
77. T19C3.8 fem-2 9225 7.476 0.933 0.970 0.967 0.970 0.925 0.921 0.943 0.847 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
78. B0025.2 csn-2 5205 7.475 0.899 0.972 0.964 0.972 0.971 0.902 0.933 0.862 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
79. C33H5.12 rsp-6 23342 7.475 0.927 0.956 0.962 0.956 0.970 0.891 0.894 0.919 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
80. D1054.14 prp-38 6504 7.475 0.957 0.959 0.965 0.959 0.957 0.930 0.830 0.918 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
81. F13H10.2 ndx-9 3125 7.474 0.914 0.953 0.931 0.953 0.984 0.983 0.928 0.828 NADH pyrophosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q19427]
82. C08B11.5 sap-49 10553 7.474 0.949 0.962 0.926 0.962 0.974 0.928 0.927 0.846 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
83. ZK1058.4 ccdc-47 8879 7.474 0.951 0.953 0.910 0.953 0.961 0.944 0.919 0.883 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
84. F39B2.11 mtx-1 8526 7.473 0.955 0.949 0.963 0.949 0.932 0.970 0.907 0.848 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
85. F43G6.9 patr-1 23000 7.472 0.909 0.970 0.964 0.970 0.907 0.950 0.922 0.880 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
86. T26A5.9 dlc-1 59038 7.472 0.968 0.975 0.948 0.975 0.965 0.946 0.898 0.797 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
87. D1022.1 ubc-6 9722 7.471 0.974 0.951 0.940 0.951 0.954 0.965 0.920 0.816 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
88. F53F4.3 tbcb-1 6442 7.469 0.961 0.959 0.944 0.959 0.905 0.926 0.926 0.889 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
89. K07C5.1 arx-2 20142 7.469 0.976 0.973 0.963 0.973 0.936 0.943 0.881 0.824 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
90. C39E9.14 dli-1 5650 7.468 0.927 0.960 0.945 0.960 0.968 0.964 0.832 0.912 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
91. F56F3.1 ifet-1 25772 7.467 0.943 0.937 0.940 0.937 0.951 0.931 0.943 0.885 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
92. F02E9.9 dpt-1 5401 7.467 0.941 0.955 0.890 0.955 0.956 0.966 0.883 0.921 Dipeptidyl Peptidase Three [Source:RefSeq peptide;Acc:NP_001040648]
93. F33D4.7 emc-6 6534 7.465 0.970 0.910 0.948 0.910 0.951 0.971 0.912 0.893 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
94. C50C3.6 prp-8 19582 7.464 0.911 0.968 0.944 0.968 0.963 0.949 0.862 0.899 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
95. C35D10.16 arx-6 8242 7.463 0.981 0.952 0.951 0.952 0.949 0.965 0.907 0.806 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
96. T17E9.2 nmt-1 8017 7.463 0.937 0.962 0.905 0.962 0.965 0.933 0.898 0.901 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
97. F52C9.7 mog-3 9880 7.462 0.936 0.961 0.959 0.961 0.920 0.902 0.922 0.901 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
98. C18A3.5 tiar-1 25400 7.462 0.923 0.971 0.969 0.971 0.973 0.922 0.862 0.871 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
99. F23F1.1 nfyc-1 9983 7.461 0.933 0.972 0.969 0.972 0.921 0.903 0.889 0.902 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
100. C06H2.6 lmtr-3 11122 7.46 0.940 0.974 0.972 0.974 0.960 0.944 0.888 0.808 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]

There are 2392 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA